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* [svn-r21048] Add configure check for endianess and adjust test depending on ↵Allen Byrne2011-06-293-4/+10
| | | | | | status of check. Bring r21026 from trunk
* [svn-r21046] Correct *-config.cmake files to set {pkg}_LIBRARIES variable.Allen Byrne2011-06-292-0/+2
| | | | Tested: windows
* [svn-r21044] Purpose:Mike McGreevy2011-06-2847-101/+5
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Fix HDFFV-7592 "Remove PACKEDBITS option from autotools files" Description: The code for h5dump's packed bits feature was conditionally compiled in via this option during its 'beta' release in 1.8.5. Now that the feature is fully supported, h5dump has since been changed to always compile the packed bits code (having removed the #ifdef H5_HAVE_H5DUMP_PACKED_BITS checks), so this option in configure is no longer needed. This commit removes the --enable-h5dump-packed-bits configure option, including the help summary from './configure --help' and the libhdf5.settings output summary, the PACKED_BITS Makefile variable, and the definition of H5_HAVE_H5DUMP_PACKED_BITS define in appropriate pubconf header files (which has already been removed from use in source code as of r20722). Note that this option was never added to the trunk, thus this commit only need occur on the 1.8 branch. Tested: - Configure output, help, & summary verified on jam - h5committested
* [svn-r21038] Assign cmake config files to an install groupAllen Byrne2011-06-271-2/+14
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* [svn-r21035] Snapshot version 1.8 release 8 (snap4)HDF Tester2011-06-277-23/+23
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* [svn-r21032] This is a follow-up checkin for r21015 (bug fix for Issue ↵Raymond Lu2011-06-241-10/+10
| | | | | | 2594). According to Quincey's suggestion, I moved the EOAs for individual files from H5FD_multi_fapl_t to H5FD_multi_t struct. It's a more proper place. Tested on jam, koala, and heiwa.
* [svn-r21024] Bug fix for Issue 2598 - In v1.6 library, there was EOA for the ↵Raymond Lu2011-06-2310-4/+214
| | | | | | | | | | | | | whole MULTI file saved in the super block. We took it out in v1.8 library because it's meaningless for the MULTI file. v1.8 library saves the EOA for the metadata file, instead. But this caused some backward compatibility problem. v1.8 library couldn't open the file created with v1.6 library. I fixed the problem by checking the EOA value to detect the file created with v1.6 library. Tested on jam, koala, and linew.
* [svn-r21018] Purpose:Jonathan Kim2011-06-227-47/+134
| | | | | | | | | | | | | | | HDFFV-5878 - GMQS: h5dump - incorrect output format for array type with multiple elements in an index Description: Merged from HDF5 trunk r21014. Fixed h5dump to display the first line of each element into correct position for multiple dimention array type. Before this fix, the first line of each element in array were displayed after the last line of previous element without moving to the next line (+indentation) Tested: jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE)
* [svn-r21002] Description:Scot Breitenfeld2011-06-2012-169/+1513
| | | | | | Brought r20958-20960 for DS fortran APIs from trunk. Tested: jam (intel)
* [svn-r21001] Snapshot version 1.8 release 8 (snap3)HDF Tester2011-06-207-23/+23
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* [svn-r20998] Add lite2 dependency on lite1 exampleAllen Byrne2011-06-191-0/+4
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* [svn-r20997] Get comment section did not add null terminator.Allen Byrne2011-06-191-7/+8
| | | | Tested: Debug windows
* [svn-r20992] I skipped the efc.c test for now because it opens the same file ↵Raymond Lu2011-06-171-4/+6
| | | | | | | | many times. VMS can't handle it. We need a solution in the future. Please see Issue 7620 in Jira about it. Not tested yet.
* [svn-r20985] Changed the release date format to yyyy-mm-dd from the previous ↵Albert Cheng2011-06-151-1/+2
| | | | | | `date` form. Tested: Jam by running bin/release and eyeballed the new date format.
* [svn-r20983] I modified the pathname to [-.test] to be more accurate. The ↵Raymond Lu2011-06-151-1/+1
| | | | | | old one [...] had problem. Tested on VMS.
* [svn-r20973] Updated windows and linux VMs tested section to match 1.8.7 releaseAllen Byrne2011-06-141-16/+16
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* [svn-r20970] Issue 4278 - When reading data fails, the error message should ↵Raymond Lu2011-06-131-2/+3
| | | | | | say which filter isn't registered. This is the follow-up commit. The previous way to construct the name of the existent data file wasn't very safe. It could be cleaned up if any user builds the library in the source directory. Tested on jam - simple change.
* [svn-r20969] Initialized errcode and type_sizeout to 0 and removed ';' in ↵Scot Breitenfeld2011-06-131-6/+5
| | | | | | Fortran source lines. Tested: jam (intel)
* [svn-r20957] Description: brought rev. 20937 from trunk, additional test for ↵Scot Breitenfeld2011-06-101-1/+76
| | | | | | attaching and detaching DS. Teste: jam (intel)
* [svn-r20947] Issue 4278 - When reading data fails, the error message should ↵Raymond Lu2011-06-071-0/+1
| | | | | | | | say which filter isn't registered. This is the follow-up commit. In my first checkin, I took out the line "H5Z_SZIP->encoder_present = SZ_encoder_enabled()" by mistake. It caused SZIP test to fail. I'm puting it back now. Tested on jam - simple change.
* [svn-r20945] Issue 4278 - When reading data fails, the error message should ↵Raymond Lu2011-06-071-14/+15
| | | | | | say which filter isn't registered. This is the follow-up commit. In my previous commit, I changed HDsnprintf to snprintf, which caused trouble for Windows because the name is _snprintf instead. So I changed it back to HDsnprintf for properly defined macro. I also changed all fprintf to HDprintf to be consistent. Tested on jam - simple change.
* [svn-r20943] Add filter_error.h5 test file to list - used by error_test test.Allen Byrne2011-06-071-0/+1
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* [svn-r20938] Description: Reverted to revision 20904 to bring the file back in Scot Breitenfeld2011-06-071-4/+2
| | | | | line with the trunk which had a later revision of the same section of code.
* [svn-r20936] Issue 4278 - When reading data fails, the error message should ↵Raymond Lu2011-06-068-29/+249
| | | | | | say which filter isn't registered. The fix is simple. Most of the effort is on the test. The file with filter enabled is created in gen_filter.c. The verification of the error message is in test_error.c. The output is compared against the standard output. Tested on jam, koala, and heiwa.
* [svn-r20932] Snapshot version 1.8 release 8 (snap2)HDF Tester2011-06-067-23/+23
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* [svn-r20931] Purpose: brought revisions 20870 and 20923 from the trunkScot Breitenfeld2011-06-052-5/+172
| | | | | | to fix bug HDFFV-7605 Tested: jam (intel compiler)
* [svn-r20928] Purpose:Jonathan Kim2011-06-0355-175/+15
| | | | | | | | | | | | HDFFV-7607: h5ls - improve efficiency of test scripts - removing top 3 extra lines from expected output files Description: Merged from hdf5 trunk r20927. This is a subtask from 'HDFFV-7514 - gmqs: h5dump - improve effectiveness of testing scripts for handling expected output files'. This is prerequisite for 'HDFFV-7602 tools - upgrade tools' test scripts to share test files among tools, providing framework for test file re-usability.' Tested: jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE)
* [svn-r20924] Snapshot version 1.8 release 8 (snap1)HDF Tester2011-05-308-23/+25
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* [svn-r20920] Issue 7579 - The overflowing ENUM values are inconsistent. ↵Raymond Lu2011-05-277-10/+296
| | | | | | | | | | When no conversion is involved in reading or writing the data, overflowing values are retained. When conversion happens, the values become -1. The conversion function puts -1 when overflow happens. I added two new dataset transfer property to control whether to fill 0xff in the destination data or convert to the destination data when overflow happens. The two new functions are H5Pset(get)_enum_conv_overflow. I also added test cases in enum.c and dtypes.c. Tested on jam, koala, and heiwa.
* [svn-r20904] Bring r20871, 20875, 20901, 20903 from trunk.Allen Byrne2011-05-259-3002/+2917
| | | | Tested: local linux
* [svn-r20898] Merge of configure changes 20891-2,4 from the trunk.Dana Robinson2011-05-244-15/+45
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* [svn-r20897] I added some comments.Raymond Lu2011-05-241-0/+15
| | | | Tested on jam - very simple change.
* [svn-r20895] Add soversion handling - use config/lt_vers.am file.Allen Byrne2011-05-242-2/+20
| | | | Tested: local linux
* [svn-r20893] Description:Quincey Koziol2011-05-2314-33/+51
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring r20885 from trunk to 1.8 branch: r20340: Address coverity issue 248. Set freed pointer to NULL if realloc fails, then check for NULL before attempting to close array of handles stored in memory addressed by pointer. r20341: Added initialization udata.path = NULL; udata.visited = NULL; to prevent unintialized use after done: label. Do C-style initialization AFTER all variable definitions. r20342: Fix valgrind error in H5DUMP-XML-tall.h5 r20343: Addressed Coverity issue 591 - check the return value of H5S_SELECT_ITER_RELEASE. r20344: Added initialization udata.path = NULL; to prevent uninitialized used after done: label r20347: Purpose: Fix memory leak in overhead.c Description: Fixed leak in test() in overhead.c where array "had" was never freed. r20348: Addressed Coverity issue 705 - added prototype for resize_configs_are_equal to cache_common.h. r20392: Purpose: Fix coverity issues 1677 and 1678 Description: Added return value checking for 4 funciton calls in H5tools_get_symlink_info(). r20394: Purpose: Fix coverity issues 1674 and 1675 Description: Modified H5Epush2() and H5E_printf_stack() to keep track of whether va_start() has been called, and to call va_end() at the end if so. r20395: Should be H5MM_calloc(count * sizeof(void*)). Fixed --gh r20396: Should be H5MM_calloc(count * sizeof(void*)). Fixed. --gh Tested on: Mac OSX/32 10.6.7 (amazon) w/debug & production (h5committested on branch)
* [svn-r20889] Snapshot version 1.8 release 8 (snap1)HDF Tester2011-05-2315-23/+31
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* [svn-r20886] purpose:Jonathan Kim2011-05-20228-761/+31
| | | | | | | | | | | | | hdffv-7514 - GMQS: h5dump - improve effectiveness of testing scripts for handling expected output files description: Removed top 3 lines from expected output file and update testing scripts accordingly. These lines started to become maintainence headaches. First phase for h5dump test update. Next phase will be for h5ls. this is prerequisite for 'hdffv-7602 tools - upgrade tools' test scripts to share test files among tools, providing framework for test file re-usability.' Tested: jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), cmake (jam)
* [svn-r20873] Issue 7564 - Allow H5Tcreat to create string type (fixed-length ↵Raymond Lu2011-05-203-9/+89
| | | | | | and variable-length). I also added a test case in dtypes.c. The commit is only for test/dtypes.c, src/H5T.c, and release_docs/RELEASE.txt. All others are property changes due to the merge from the trunk. Tested on jam but I tested the same change for the trunk on jam and linew - relatively simple.
* [svn-r20863] Adjust CPack configuration location by removing version ↵Allen Byrne2011-05-184-6/+12
| | | | extension in folder name. Add install configuration commands if ext libs are packaged with project.
* [svn-r20859] Issue 2599 - Cross-test BE and LE data. I added the test for ↵Raymond Lu2011-05-186-751/+799
| | | | | | deflate, szip, fletcher32, shuffle and nbit filter in cross_read.c and gen_cross.c. I also took out the data file for OpenVMS because the data isn't native but IEEE for floating-numbers. Tested on jam and linew. But I tested the same change to the trunk with h5committest.
* [svn-r20857] Correct state of EXTERNALLY_CONFIGURED when using ↵Allen Byrne2011-05-181-6/+6
| | | | EXTERNAL_PROJECT for extlibs.
* [svn-r20852] Add CPack commands to properly include extlibs into packageAllen Byrne2011-05-171-82/+2
| | | | Tested: windows
* [svn-r20850] Correct Position of CPack includeAllen Byrne2011-05-171-2/+2
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* [svn-r20849] Change CPack commands for extlibs to test for EXTERNAL_PROJ ↵Allen Byrne2011-05-171-9/+12
| | | | define instead of CMakeCache.txt file.
* [svn-r20843] Add CPack commands to properly include extlibs into packageAllen Byrne2011-05-161-76/+90
| | | | Tested: windows
* [svn-r20811] Purpose:Jonathan Kim2011-05-132-1/+4
| | | | | | | | | | | | | HDFFV-7594 - GMQS: h5dump shows wrong values for H5T_STD_I8LE dataset on Blue-gene (ppc64 linux BE +@) Description: Merged from HDF5 trunk r20804. For the STD_I8 type data, updated to use 'signed char' instead of 'char' as 'char' could be defined as unsigned on a certain system, which cause h5dump to display data values incorrectly. Tested: jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), cmake
* [svn-r20809] Add Using_CMake.txt file to docs and installAllen Byrne2011-05-133-0/+183
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* [svn-r20806] references files for jam tests are in sub-folder - testfilesAllen Byrne2011-05-131-502/+502
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* [svn-r20802] Bring trunk revision 20798 to 1.8. Trunk changes passed overnight.Allen Byrne2011-05-1213-366/+692
| | | | Tested: local linux
* [svn-r20801] Correct install path variableAllen Byrne2011-05-121-16/+19
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* [svn-r20799] Correct version subrelease string testAllen Byrne2011-05-121-3/+3
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