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* [svn-r25204] Description:Binh-Minh Ribler2014-05-194-8/+2
| | | | | | | | | | | | | | Set OUTPUT_DIRECTORY to cpplus_RM and HTML_OUTPUT to '.' because they were reset by accident causing "bin/release doc" to fail. Ran bin/release to verify the failure was gone. Merged from trunk: r25202 Also, removed from functions' comments some arguments that are only applicable to the trunk. Doxygen gave warnings. Platforms tested: Linux/32 2.6 (jam) - very minor, only comments
* [svn-r25203] Description:Binh-Minh Ribler2014-05-191-1/+1
| | | | | | | | | Made printError() virtual as the original; missed it from the previous fix. Merged from trunk: r25123 Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r25200] Snapshot version 1.8 release 14 (snap3)HDF Tester2014-05-186-20/+20
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* [svn-r25198] Description:Quincey Koziol2014-05-186-23/+12
| | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring r25197 from trunk to 1.8 branch: Bring changes from hdf5_1_8_coverity branch back to trunk: r20878: Issue 76: Check if H5Tget_nmembers(type) fails and simply return(FALSE). Also move printf to after check. r20880: Issue 192: Create ret_val var set to -1. Add out label for failures to jump to, return ret_val at bottom. r20882: Fixes for coverity: 1) bug #1679: remove dead code in test/mf.c 2) bug #1680: remove dead code in tools/lib/h5diff_dset.c r20883: Fix coverity issue 585 Description: Changed variable "c" in processStrData in h5import.c to an int, to match fgetc return value, and removed call to feof, instead checking if c == EOF. Tested on: MacOSX/64 10.9.3 (amazon) w/C++, FORTRAN & parallel (too minor to require h5committest)
* [svn-r25190] Fix CMP0053 cmake usage and add VS2013Allen Byrne2014-05-141-4/+6
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* [svn-r25186] update cmake command name caseAllen Byrne2014-05-122-10/+10
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* [svn-r25184] correct path statementAllen Byrne2014-05-121-1/+1
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* [svn-r25180] Correct list indentationAllen Byrne2014-05-091-2/+2
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* [svn-r25163] Update file to match release changesAllen Byrne2014-05-051-29/+98
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* [svn-r25159] Snapshot version 1.8 release 14 (snap2)HDF Tester2014-05-046-20/+20
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* [svn-r25146] Updated sections.Allen Byrne2014-05-021-464/+210
| | | | | Changed APPENDIX to Platform configuration file example with extra comments. Updated files for web.
* [svn-r25140] Commit Joel's fix to this branch.Albert Cheng2014-05-012-5/+274
| | | | | | | | | | | | | | | | | | | | | | | | | | Bug Fix: HDFFV-8247 Description: Failure to write fill values to the user's buffer when reading unallocated chunks from datasets that have a fill value set to H5D_FILL_VALUE_DEFAULT. A consequence of this was the reporting of spurious data values in h5dump and h5diff output. Solution: Added check for fill value of H5D_FILL_VALUE_DEFAULT whenever fill value setting was checked to decide whether or not to fill. This effectively treats H5D_FILL_VALUE_DEFAULT the same as H5D_FILL_VALUE_USER rather than H5D_FILL_VALUE_UNDEFINED. Tested: h5committest (platypus, ostrich, jam-pp, koala) ran successfully (fillval test was modified to reveal and check for this error) H5Dchunk.c: fix in library code. fillval.c: Added test_partalloc to expose potential fill value issues.
* [svn-r25137] Bug: HDFFV-8433Albert Cheng2014-04-301-23/+26
| | | | | | | The temporary directory used by zip is the same as the rest but it has to be different. Changed tar2zip to use a different (ztmpdir) name. Tested: by hand running "bin/release ... gzip zip md5".
* [svn-r25132] Add clarification to download location and extlibs.Allen Byrne2014-04-281-7/+22
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* [svn-r25127] Snapshot version 1.8 release 14 (snap1)HDF Tester2014-04-276-20/+20
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* [svn-r25121] HDFFV-8755: Remove compress option from bin/releaseAlbert Cheng2014-04-251-6/+5
| | | | Tested: by hand. "bin/release ... compress" to see it failed and to see it succeeded when compress is not used.
* [svn-r25119] Description:Quincey Koziol2014-04-252-13/+16
| | | | | | | | | Make the exit status from ph5diff always be 0, as it is on the trunk. Also a few coding standard cleanups to the test generation code. Tested on: MacOSX/64 10.9.2 (amazon) w/FORTRAN & parallel (h5committest not necessary)
* [svn-r25116] Description:Binh-Minh Ribler2014-04-252-5/+26
| | | | | | | | | | - Put back Exception::printError for backward compatibility - Added static member function Exception::printErrorStack to print error stack without an instance of Exception. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r25115] Description:Binh-Minh Ribler2014-04-251-1/+3
| | | | | | | | | | - Put back Exception::printError for backward compatibility - Added static member function Exception::printErrorStack to print error stack without an instance of Exception. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r25111] Changed Subeversion EOL and executable properties. No code changes.Dana Robinson2014-04-2536-2186/+2186
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* [svn-r25109] Description:Quincey Koziol2014-04-2543-804/+1029
| | | | | | | | | | | | | | | | | | | | | | | | | | | Bring r25084, 25088, 25092, 25097 from trunk to 1.8 branch: r25084: Begin process of migrating from using property list IDs internally to the library to using the internal generic property list data structure. r25088: Introduce "file I/O info" struct, to hold file & dxpl pointers, and start propagating up through library. r25092: More migration to using H5F_io_info_t pointers and away from using property list IDs internally. Also, clean up some compiler warnings in the cache code. r25097: Make progress toward moving from DXPL IDs to property list structures within the library. Also move the signature location code from the H5F package to the H5FD package, where it's a better fit. Also, clean up some more compiler warnings along the way. Tested: Mac OSX/64 10.9.2 (amazon) w/C++, FORTRAN & parallel (h5committested on trunk)
* [svn-r25106] Removed LT_ADD_LIBHDF5_DEPENDENCY configure conditional to roll ↵Larry Knox2014-04-2547-119/+23
| | | | | | | | back fix for removing rpaths from lib files. The fix also removed dependencies on libhdf5, etc. when the --disable-sharedlib-rpath configure option was invoked. Added instead configure variable hardcode_into_lib=no. This removes rpath from lib files on Linux and solaris machines. Tested with h5committest on jam, koala, ostrich and platypus (cmake), and on emu and kite.
* [svn-r25104] Correct installed menu nameAllen Byrne2014-04-251-1/+1
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* [svn-r25100] Added -V to example command line.Allen Byrne2014-04-251-1/+2
| | | | Added note about INSTALLDIR.
* [svn-r25099] Disable fortran by defaultAllen Byrne2014-04-251-9/+6
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* [svn-r25094] Bug: HDFFV-8433Albert Cheng2014-04-242-1/+73
| | | | | | | | | | | Need to unify Windows release process (zip file) and Unix release process (bin/release-> tarfile) Solution: Added a new option (zip) to generate Windows zip file from the release tarball. Tested: by hand running "bin/release ... gzip zip" to verify zip file looks right. Allen and Dana then confirmed the zip file can be used to build and test HDF5 library without error.
* [svn-r25082] Bug HDFFV-8625, HDFFV-8639, HDFFV-8745:Albert Cheng2014-04-2210-8/+66
| | | | | | | | | | | | | | | | | | | h5diff issues "unable to read attribute" error message when comparing two files Description: h5diff did not handle attributes of variable length strings correctly. It created the wrong memory type if one but not both compared attributes are of the variable strings type. It ended in H5Aread() failure. Solution: We decided to treat the case when one type is variable length string and the other is not as incomparable. That bypassed the above error. We still need to figure out the proper way, if possible, to compare variable string with non-variable string types. Tested: h5committested plus tested in Swallow (OS X 10.8).
* [svn-r25076] Correct the install folder logic.Allen Byrne2014-04-223-22/+4
| | | | Tested: local linux
* [svn-r25074] HDFFV-8709: Add changes for HDFFV-8676, -8677, -8678Allen Byrne2014-04-224-94/+101
| | | | Tested: local linux
* [svn-r25071] Snapshot version 1.8 release 14 (snap0)HDF Tester2014-04-206-19/+19
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* [svn-r25068] Fix for HDFFV-8276, the --disable-sharedlib-rpath configure ↵Larry Knox2014-04-189-17/+37
| | | | | | | | | | | | | optino doesn't remove rpaths from th e library files, was checked into trunk in September 2013, but not into the 1.8 branch. part of the code was merged to v1.8 in the interim for fortran, but not for hl or c++. The rest is mer ged in this revision. The --disable-sharedlib-rpath option seems to have no effect on non-Linux platforms. Tested with h5committest on jam, koala, ostrich and platypus. Tested with --disble-sharedlib-rpath option on jam, platypus, emu and quail. Absence of rpaths verified on jam and platypus.
* [svn-r25062] Description:Binh-Minh Ribler2014-04-1822-54/+325
| | | | | | | | | | | | Put back overloaded functions for backward compatibility: - were replaced by better prototyped versions, such as Attribute::getNam. - were modified to add const to constant arguments. Added notes for future removal in documentation. (Elena approved.) Merged from trunk r25061. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r25056] Description:Frank Baker2014-04-161-1/+1
| | | | Update copyright notice to include 2014.
* [svn-r25053] Merge changes to RELEASE.txt for 1.8.13 release:Larry Knox2014-04-161-21/+31
| | | | | | | | | Reviewed and revised version information for unix daily tested machines in supported a d tested platforms sections. Added description of LD_LIBRARY_PATH change to configure and using scripts to compile nd run installed example files to Bug Fixes/Configuration section. Text change only.
* [svn-r25050] Description:Quincey Koziol2014-04-1628-89/+477
| | | | | | | | | | | | | | | Bring r24995 and r24998 from the trunk to the 1.8 branch: r24995: Improve checks for NULL buffer from user during H5Dread/H5Dwrite calls. r24998: Check in Neil's changes for correctly handling case where library is reinitialized through a deprecated routine. Tested on: Mac OSX/64 10.9.2 (amazon) w/serial & paralle (change has baked on trunk for >7 days)
* [svn-r25044] Correct test DEPENDS format.Allen Byrne2014-04-141-1/+1
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* [svn-r25042] Description:Binh-Minh Ribler2014-04-141-2/+18
| | | | Updated for C++ API new features and bug fixes.
* [svn-r25041] Maintenance: More version cleanup in the fileElena Pourmal2014-04-141-3/+3
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* [svn-r25039] Maintenance: Cleaned the RELEASE.txt file for the next ↵Elena Pourmal2014-04-141-84/+19
| | | | maintenance cycle.
* [svn-r25036] Maintenance before creating 1_8_13 branch: changed version ↵Elena Pourmal2014-04-1413-28/+28
| | | | number to 1.8.14-snap0
* [svn-r25035] Snapshot version 1.8 release 13 (snap8)HDF Tester2014-04-136-20/+20
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* [svn-r25033] Purpose:Dana Robinson2014-04-129-90/+529
| | | | | | | | | | | | | | | | | | Merged r24993 from the trunk. Adds core VFD write tracking functionality. When enabled, the core VFD will track dirty regions of the file and only write out the changed regions. The new H5Pget/set_core_write_tracking() API call controls this feature. A new "core_paged" VFD target was added to the check-vfd target in test/Makefile.am that runs all tests with the new write tracking functionality. Tested on: 32-bit LE linux (jam) 64-bit LE linux (koala) 64-bit BE linux (ostrich) Each platform was tested with HDF5_DRIVER set to "core" and "core_paged". Jam was also tested with the standard sec2 driver.
* [svn-r25032] Description:Binh-Minh Ribler2014-04-122-2/+2
| | | | | | Fixed typos in comments. Platforms tested: Linux/32 2.6 (jam) - very minor
* [svn-r25031] Purpose: Fix HDFFV-8737Binh-Minh Ribler2014-04-127-68/+2193
| | | | | | | | | | | | | | | | Description: - Fixed a few comments that Doxygen gave warnings on. - Updated configuration file for Doxygen. - Removed stylesheet from configuration so Doxygen will use the default stylesheet and removed the CLANG-related lines to eliminate another error since we're not using that feature, so the lines should not present. (from cpp_doc_config) - Added missing images (merged from trunk-r24996 and r25019) Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r25030] Purpose: Fix HDFFV-8658Binh-Minh Ribler2014-04-126-15/+42
| | | | | | | | | | Description: Turned on warnings and removed some of those. (merged from trunk-r24994) Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r25029] Purpose: Fixed HDFFV-3384Binh-Minh Ribler2014-04-1217-45/+43
| | | | | | | | | | | Description: - Added const to const arguments - Fixed miscellaneous comments (merged from trunk-24991) Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r25028] Purpose: Fix HDFFV-8367Binh-Minh Ribler2014-04-123-0/+191
| | | | | | | | | | | | | | | Description: - Added wrappers to CommomFG for H5Oget_info_by_name() to get a child object's type (requested by user) H5O_type_t childObjType(const H5std_string& objname) const; H5O_type_t childObjType(const char* objname) const; H5O_type_t childObjType(hsize_t index, H5_index_t index_type=H5_INDEX_NAME, H5_iter_order_t order=H5_ITER_INC, const char* objname=".") const; - Added tests to tobject.cpp (merged from trunk-r24983) Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r25027] Merged changes from the trunk to the branch,Scot Breitenfeld2014-04-1250-1096/+1637
| | | | | | svn merge -r24929:25009 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran tested: jam (gnu)
* [svn-r25026] Description:Binh-Minh Ribler2014-04-121-0/+1
| | | | Added tobject.cpp.
* [svn-r25024] Description:Binh-Minh Ribler2014-04-121-0/+1
| | | | Added c++/test/tobject.cpp
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