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* [svn-r11421] Purpose:James Laird2005-09-1638-172/+440
| | | | | | | | | | | | | | | Feature Description: Added H5_CFLAGS, etc. to 1.7 branch. Now compilation flags can be put in H5_*FLAGS and they'll be used when building hdf5 but not in h5cc. Platforms tested: mir, sleipnir, modi4 Misc. update:
* [svn-r11420] Purpose:James Laird2005-09-1642-51/+233
| | | | | | | | | | | | | | | | | Bug fix Description: Disabled C++ shared libraries for Sun Workshop compiler. Solution: This bug only seems to happen when using the -xarch=v9 flag to compile in 64-bit mode, but disabling shared libraries entirely for this compiler is an easier fix (I don't know how to detect 64 bit mode from the command line). The framework for disabling shared libraries for other C++ compilers is in place. Platforms tested: sol, mir, sleipnir, modi4
* [svn-r11418] Purpose:James Laird2005-09-1541-44/+250
| | | | | | | | | | | | | | | | Bug fix/feature Description: Disabled shared libraries for a number of Fortran compilers that don't support them. This allows other compilers to support shared Fortran libraries. Solution: Added a conditional, SHARED_FORTRAN_CONDITIONAL, which is true if Fortran supports shared libraries. It is set in configure.in. Platforms tested: mir, sleipnir, colonelk, heping
* [svn-r11417] Purpose:Fang Guo2005-09-141-0/+30
| | | | | | | | | | | Maintenance on Windows Description: Add mpi source code files to hdf5dll.dsp Solution: Platforms tested: MSVS 6.0 on Windows XP Misc. update:
* [svn-r11416] Purpose:Fang Guo2005-09-141-0/+30
| | | | | | | | | | | Maintenance on Windows Description: Add in mpi source code files to hdf5.dsp Solution: Platforms tested: MSVS 6.0 on Windows XP Misc. update:
* [svn-r11415] Purpose: Internal design change.Raymond Lu2005-09-148-199/+210
| | | | | | | | | | | | | | | | | Description: H5T_register() replaces any existing data conversion path with a new path. Solution: Added a parameter to H5T_register() and H5T_path_find() to signal the library whether the new conversion path is from API function H5Tregister() or from private function like H5T_init_interface(). If it is from H5Tregister(), replace existing path. If it's from H5T_init_interface() and the library is trying to register default hard conversion functions, don't replace existing path because the path is registered by the library. For example, the library registered H5T_conv_int_float() and is trying to register H5T_conv_long_float(). The size of long is equal to int. There's no need to replace the path H5T_conv_int_float(). Platforms tested: h5committest and fuss.
* [svn-r11414] Purpose: Rename a API functionRaymond Lu2005-09-145-21/+21
| | | | | | | | | | | Description: The API function H5Tis_hard() which was recently checked in has been renamed to H5Tcompiler_conv() to be more descriptive. No other changes. Platforms tested: fuss - simple change. Misc. update: config/lt_vers.am to update libtool version.
* [svn-r11411] Purpose:James Laird2005-09-1329-257/+177
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bug fix Description: Building with --disable-static seems to have been broken on several platforms. Fixed this. Configure will now disable shared libraries automatically when using pgf90 or when building on Cygwin. Solution: To avoid errors when using shared libraries with pgf90 (which I had not realized were compiler-specific), I had manually set convenience libraries to use the -static linking flag. Apparently, this is not necessary, and caused these libraries to be created as empty archives when --disable-static was used. Also, some libraries were including other libraries, which was not necessary. I also fixed code in configure.in to correctly detect whether shared or static libraries are enabled, and moved code that disables shared libraries to before libtool is created (rather than editing libtool after the fact). Despite repeated warnings that only one shared library can be linked at a time, I have yet to have shared libraries break the linking of tests on any system. We'll see if the Daily Tests turn up anything. Platforms tested: mir (fortran, C++), sleipnir (C++), modi4 (fortran, C++, parallel), sol (fortran, C++), cygwin
* [svn-r11409] Purpose:Fang Guo2005-09-131-0/+15
| | | | | | | | | | | Maintenance on Windows Description: Add in H5Pgcpl.c(Newly checked in) into hdf5 project file on Windows Solution: Platforms tested: MSVS 6.0 On windows XP Misc. update:
* [svn-r11408] Purpose:Fang Guo2005-09-131-0/+15
| | | | | | | | | | | Maintenance on Windows Description: Add H5Pgcpl.c(newly checked in) into hdf5 project file on windows Solution: Platforms tested: MSVS 6.0 on Windows XP Misc. update:
* [svn-r11407] Purpose:Fang Guo2005-09-131-170/+110
| | | | | | | | | | | Maintenance on Windows Description: Changes made for windows due to the change of h5detect.c Solution: Platforms tested: MSVS 6.0, VS .Net, Intel 8.0 on Windows XP Misc. update:
* [svn-r11406] Purpose:Fang Guo2005-09-132-0/+6
| | | | | | | | | | | | Maintenance on Windows Description: Changes made for windows due to the change of code H5f90i.h H5match_types.c Solution: Platforms tested: MSVS 6.0 On windows XP Misc. update:
* [svn-r11405] Purpose:Leon Arber2005-09-131-0/+92
| | | | | | | | | | | | | | | Bug fix Description: A whole chunk of this file somehow got deleted and the heavily reduced file was accidentally checked in. This is the complete version of the file, with the mpiicc fix. Solution: Platforms tested: Misc. update:
* [svn-r11404] Purpose: MaintenanceElena Pourmal2005-09-132-1/+2
| | | | | | | | | | Description: Brought back changes from SX-6. Solution: Program will not compile. Fixed. Platforms tested: SX-6, heping and mir with new g95 Misc. update:
* [svn-r11403] Purpose: MaintenanceElena Pourmal2005-09-132-2/+3
| | | | | | | | | | Description: Brought back changes from SX-6. Solution: Tests will not compile. Fixed. Platforms tested: SX-6, heping and mir with new g95 Misc. update:
* [svn-r11402] Purpose: MaintenanceElena Pourmal2005-09-133-4/+4
| | | | | | | | | | | | Description: Compiler complained about const type * variables that were used in the functions that require "non const" parameters. Compilation failed. Solution: Use casting to avoid compilation errors. Platforms tested: SX-6, heping and mir with new g95 Misc. update:
* [svn-r11401] Purpose: MaintenanceElena Pourmal2005-09-131-1/+5
| | | | | | | | | | Description: brought back changes from SX-6 Solution: Platforms tested: SX-6, heping and mir with new g95 Misc. update:
* [svn-r11400] Purpose: MaintenanceElena Pourmal2005-09-131-2/+5
| | | | | | | | | | | Description: Added -K c99 flag to sxc++ flags to ienforce C99 standard; added cache values for getrusage and gethostname Solution: Platforms tested: SX-6 Misc. update:
* [svn-r11397] Purpose:Leon Arber2005-09-131-1/+0
| | | | | | | | | | | | | | | | Bug fix Description: Forgot to remove a debug statement before committing. Solution: The script printined out what it thought CC_BASENAME was for debugging. Removed this print statement. Platforms tested: minor change, mcr Misc. update:
* [svn-r11396] Purpose:Albert Cheng2005-09-121-1/+1
| | | | | | | | | | | | | | | | Code cleanup. Description: g++ on sleipnir complained and exited failed because the malloc statement in ALIGNMENT was not properly casted. Solution: added the proper (char * ) casting. Platforms tested: Passed heping using gcc. Sleipnir g++ passed too but that was also because the default development mode is used.
* [svn-r11395] Purpose: Bug fixRaymond Lu2005-09-122-238/+461
| | | | | | | | | | | | | | | | | | Description: Quincey added the condition branch (else if (*((ST*)S) != (ST)((DT)(*((ST*)S))))) in the definition of the macro H5T_CONV_Fx_CORE. It handles a special situation when the source is "float" and assigned the value of "INT_MAX". Compilers do roundup making this value "INT_MAX+1". This branch is to check that situation and return exception for some compilers, mainly GCC. The branch if (*((ST*)S) > (DT)(D_MAX) || (S_PREC < D_PREC && *((ST*)S) == (DT)(D_MAX))) is for some compilers like Sun, HP, IBM, and SGI where under the same situation the "int" doesn't overflow. A test was added to dt_arith.c to check 2 conversions, from float to int where the float is INT_MAX, and from double to signed char where the double is SCHAR_MAX. Platforms tested: h5committest and fuss.
* [svn-r11394] Purpose:Leon Arber2005-09-121-93/+2
| | | | | | | | | | | | | | | Bug fix Description: Same bug as was just checked in for v16. Do the complicated derived datatype check for compilers named mpiicc in addition to mpicc. Solution: Platforms tested: Misc. update:
* [svn-r11392] Purpose:Quincey Koziol2005-09-121-1/+1
| | | | | | | | | | | Bug fix Description: Recent group code changes tweaked the size of the free space in the file for this test. Update to the latest correct value. Platforms tested: h5committested
* [svn-r11389] Purpose:MuQun Yang2005-09-121-7/+2
| | | | | | | | | | | Modify the comments for collective chunk IO support Description: Solution: Platforms tested: Misc. update:
* [svn-r11388] Purpose:Pedro Vicente Nunes2005-09-122-9/+13
| | | | | | | | | | | | | | | bug fix Description: during the generation of some test files, H5Fclose was not called during the #ifdef detection of the scale ofsset filter, a wrong macro symbol was used Solution: Platforms tested: linux Misc. update:
* [svn-r11386] Purpose:Quincey Koziol2005-09-1218-416/+625
| | | | | | | | | | | | | | Code cleanup/reorganization Description: Merge back some more changes extracted from the "compact group" set. This bunch cleans up and prepares the H5G_* routines for eventual import of new features. Platforms tested: FreeBSD 4.11 (sleipnir) Linux 2.4 Mac OS X.4
* [svn-r11384] Purpose:Quincey Koziol2005-09-1230-295/+610
| | | | | | | | | | | | | | | | | | | | | Code cleanup Description: Merge back changes from "compact group" work that improve the infrastructure of the library and may impact others. In this round of merging, that includes: - Move datatype allocation into single internal routine, instead of duplicated code that was spread out in a dozen or so places. - Clean up guts of object header routines (H5O_*) to allow for some of the fancieroperations that need to be performed on groups, along with some general improvements. - Added a new error code - Some minor cleanups in other code.... Platforms tested: FreeBSD 4.11 (sleipnir) Linux 2.4 Mac OS X
* [svn-r11381] Purpose:Albert Cheng2005-09-091-1/+1
| | | | | | | | | | | | | | | | | | | bug fix. Description: In Janus (Tflops), the test would seg-fault in production (compiled with -O). If compiled with -O0, it would be okay. Track down the problem to the for loop index i & j being declared with type hsize_t which is usually unsigned long int. Guess the Tflop compiler has a bug in optimization that could not handle unsigned int as for loop index. Solution: Since it is no need for i & j to be hsize_t and it makes more sense to have them with type int. Changed them to int type. Platforms tested: Passed in tflops and colonelk here.
* [svn-r11374] Purpose: Maintenance/improvementElena Pourmal2005-09-081-0/+5
| | | | | | | | | | | Description: Added support for "big" REAL and DOUBLE PRECISION types. Solution: Platforms tested: heping with g95 (-r8, -d8) mir with ifc (-r16, -r8) Misc. update:
* [svn-r11373] Purpose: Maintenance/improvementElena Pourmal2005-09-081-1/+1
| | | | | | | | | | | Description: Fixeda typo in an error message Solution: Platforms tested: heping with g95 (-r8, -d8) mir with ifc (-r16, -r8) Misc. update:
* [svn-r11372] Purpose: Maintenance/improvementElena Pourmal2005-09-083-10/+151
| | | | | | | | | | | | | | | | Description: Added support for "big" REAL and DOUBLE PRECISION datatypes (i.e. sizes of Fortran real and double precision may be 8 and/or 16 bytes; usually specified by compilers flags like -r8, -r16, -d8, etc.) Solution: Added code to generate all necessary datatypes on a fly. Platforms tested: heping with g95 (-r8, -d8) mir with ifc (-r16, -r8) Note: multi file test failed when REAL is 128 bit. I will address this later. Misc. update:
* [svn-r11370] Purpose: Typo fixElena Pourmal2005-09-071-1/+1
| | | | | | | | | | Description: Fixed a typo introduced by my previous check in Solution: Platforms tested: heping Misc. update:
* [svn-r11369] Purpose: Improvement/maintenanceElena Pourmal2005-09-071-0/+43
| | | | | | | | | | | | Description: Added code to generate sizes of Fortran REAL and DOUBLE PRECISION types. This will "almost" eliminate H5f90i.h file that defines C stubs datatypes. Solution: Platforms tested: heping with g95 (-r8, -d8 and default settings) Misc. update:
* [svn-r11368] Purpose:Fang Guo2005-09-071-18/+25
| | | | | | | | | | | Maintenance on Windows Description: Add definition for int <-> float conversion exception Solution: Platforms tested: MSVS 6.0 on Windows XP Misc. update:
* [svn-r11366] Purpose:Albert Cheng2005-09-071-2/+2
| | | | | | | | | | | | | | upgrade. Description: A new feature md5 is added to the release script. Upgrade snapshot to include md5 in the snapshot release process. Platforms tested: No test since the change is pretty simple and it is hard to test without really doing a snapshot release. Misc. update:
* [svn-r11365] Purpose:Fang Guo2005-09-073-8/+14
| | | | | | | | | | | Add more assertion error check Description: Solution: Platforms tested: heping Misc. update:
* [svn-r11364] Purpose:Leon Arber2005-09-071-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bug fix Description: Incorrectly terminated the received string in getenv_all Solution: Tasks would incorrectly terminat the environment string they received from the root task in getenv_all. They did the equivalent of: env[strlen(str) + 1] = '\0'. This resulted in a single "garbage" character inserted at the end of the string. This wasn't noticed until now because it seems that on most platforms this garbage character was a 0 anyway. This has been corrected to; env[strlen(str)] = '\0'. Platforms tested: Red Storm (where the bug was discovered) heping (pp) Misc. update:
* [svn-r11363] Purpose:James Laird2005-09-071-1/+8
| | | | | | | | | | Updated release notes Description: Added md5 checksumming and configure flag checking to release notes. Platforms tested: Change only to release notes
* [svn-r11362] Purpose:James Laird2005-09-071-17/+31
| | | | | | | | | | | | | | | | | | | | Feature - md5 checksum Description: Added md5 checksumming to snapshot releases. When bin/release is run, it will by default create a .tar archive and a .md5 checksum of that archive in the destination directory. Solution: md5 is now a method in bin/release, along with the various ways to compress hdf5. The checksum is always of the .tar archive, even when other forms of compression are used (this is so that a given release always has only one checksum, for simplicity). Platforms tested: mir (change to bin/release only) Misc. update:
* [svn-r11361] Purpose:James Laird2005-09-072-2/+2
| | | | | | | | | | | | | | | | Bug fix Description: Cygwin was failing (seemingly only when I built in parallel) when it couldn't find or build H5detect. Fixed a dependency. Solution: H5init.c was depending on H5detect instead of H5detect$(EXEEXT). On Cygwin, applications end in .exe ! Platforms tested: mir, cygwin (finrod)
* [svn-r11360] Purpose: SX-6 portElena Pourmal2005-09-071-1/+1
| | | | | | | | | | Description: SX-6 doesn't need to use ranlib. Solution: Set RANLIB variable to ":" (suggested by James) Platforms tested: SX-6 Misc. update:
* [svn-r11359] Purpose: Bug fix/maintenance/new featureElena Pourmal2005-09-071-0/+2
| | | | | | | | | | | | | | | | | | | Description: Currently we are trying to match excatly Fortran and C types. Unfortunately, some systems (SX-6) provide compiler switches (-ew) that make ALL Fortran types to be at least of size 8. As a result, Fortran library cannot be compiled. Solution: Allow INTEGER(HID_T) type to be 8 bytes if necessary. The values of this type are originated in the C library and can be safely passed back and forth. Please note that we cannot do the same for INTEGER(SIZE_T) type. Fortunately there is a switch that allows size_t be 8 bytes for both C and Fortran compilers. Platforms tested: It is a minor change, therefore SX-6 only; daily tests will do the rest :-) Misc. update:
* [svn-r11357] Purpose: SX-6 portElena Pourmal2005-09-061-6/+24
| | | | | | | | | | Description: Brought back changes from SX-6. Solution: Platforms tested: SX-6 NEC America Misc. update:
* [svn-r11356] Purpose: Update document.Raymond Lu2005-09-061-0/+3
| | | | Misc. update: Information about H5Tis_hard().
* [svn-r11355] Purpose: A new API function and its test.Raymond Lu2005-09-064-0/+142
| | | | | | | | | Description: Put in a new API funciton, H5Tis_hard. It checks whether the conversion function from a native type to another native type is a compiler (hard) conversion. Also checked a test in test/dt_arith.c. Platforms tested: h5committest and fuss.
* [svn-r11353] Purpose:James Laird2005-09-062-4/+25
| | | | | | | | | | | | | | | | | | Bug fix Description: Configure should now throw an error when C++ or threadsafe is enabled and a parallel compiler is being used. Platforms tested: sleipnir and modi4 Tested --enable-cxx --enable-parallel --disable-cxx --enable-cxx --disable-parallel cases in particular. Misc. update:
* [svn-r11350] Purpose:Albert Cheng2005-09-062-4/+4
| | | | | | | | | | | | | | | | | | Bug fix. Description: The incompatibility of enable-parallel and enable-cxx was not correctly coded. It would complained even for the case of ./configure --enable-cxx --disable-parallel. Solution: Changed it to use "$enable_XYZ" = "yes". Fixed the same for the enable-threadsafe checking too. Platforms tested: tested in heping. Misc. update:
* [svn-r11349] Purpose:Albert Cheng2005-09-051-25/+40
| | | | | | | | | | | | | | | | | | | | | | | | | | | Bug fix. Description: Some tests showed the filesize was not as expected. But the error was intermittent. This was a racing condition as some processes finish extend_chunked_dataset() sooner than others and return to the main body which proceeds to call the next test which also uses the same test data file and alters it. That messes up the "slower" processes which then see unexpected filesize. Also, the routine create_chunked_dataset() which creates test data file actually was executed by all processes. That is wrong. Solution: Added a barrier at the end of extend_chunked_dataset to make sure all processes are done with the test data file before returning. Changed create_chunked_dataset such that only one process would create the test data file. The rest does nothing but just wait for it to finish. Platforms tested: Tested in TG-NCSA in which the errors were detected. Misc. update:
* [svn-r11346] Purpose:Quincey Koziol2005-09-031-413/+466
| | | | | | | | | | | | | | | | | Bug fix & code cleanup Description: Fix problem with detecting precision overflows in a more portable way. (I was depending on the compiler not removing some temporary variables, which was a bad bet... :-) Also, hoist the checking for the exception handling routine out of the inner conversion loop, which should speed up conversions which don't have an exception handling routine defined. Platforms tested: FreeBSD 4.11 (sleipnir) h5committest
* [svn-r11345] Purpose:Quincey Koziol2005-09-033-54/+290
| | | | | | | | | | | | | | | | Bug fix & code cleanup Description: Address most of datatype conversion exception handling bug that Ed Hartnett reported. (He's reported a different problem now, but we're closer at least). Also, condense exception handling #ifdef's into one location instead of spread out in so many places. Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
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