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* Merge pull request #2705 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2020-07-217-14/+14
|\ | | | | | | | | | | | | hdf5_1_10 * commit '892ccb28fbf37b196dfea9043b09b1dae8e8d501': Examples DESTDIR and github action
| * Examples DESTDIR and github actionAllen Byrne2020-07-217-14/+14
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* Merge pull request #2704 in HDFFV/hdf5 from ↵Dana Robinson2020-07-2014-32/+522
|\ | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:1_10_normalization to hdf5_1_10 * commit 'aecefbb2f5737890a27dcfd2ef20276d2ff88b2a': Corrected missing H5CS thread-safety change. Brought over thread-safety changes from develop.
| * Corrected missing H5CS thread-safety change.Dana Robinson2020-07-201-5/+1
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| * Brought over thread-safety changes from develop.Dana Robinson2020-07-2013-27/+521
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* Merge pull request #2702 in HDFFV/hdf5 from ↵Dana Robinson2020-07-2026-288/+213
|\ | | | | | | | | | | | | ~DEROBINS/hdf5_der:1_10_normalization to hdf5_1_10 * commit '795a2e5058c6214df1777a073e6b058638377003': Normalization with develop.
| * Normalization with develop.Dana Robinson2020-07-2026-288/+213
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* | Merge pull request #2698 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2020-07-2011-11/+137
|\ \ | |/ |/| | | | | | | | | hdf5_1_10 * commit '8c9b3d240c0e89cb6f538ee9d567dfa0e7fff6c0': CMake updates:
| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2020-07-1738-6149/+11237
| |\ | |/ |/| | | | | * commit '8b6cd7cfddf91308cf860f2da3d28e208fd89788': Merge of dataspace improvements from develop.
* | Merge pull request #2699 in HDFFV/hdf5 from ↵Dana Robinson2020-07-1738-6149/+11237
|\ \ | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:hdf5_1_10_merge to hdf5_1_10 * commit '02762e8244741b9ff1f9203788e7237f53cf8d96': Merge of dataspace improvements from develop.
| * | Merge of dataspace improvements from develop.Dana Robinson2020-07-1638-6149/+11237
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| * CMake updates:Allen Byrne2020-07-1511-11/+137
|/ | | | | | Add build folder as Include for generated files Add install option for copying Fortran mod files to include folder Add PRI defines to win32defs file Exclude mingw from extra flags
* Merge pull request #2690 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2020-07-141-1/+4
|\ | | | | | | | | | | | | hdf5_1_10 * commit 'fe18e4fd13bdc6433f46b8f35d6057acb306b824': Merge pull request #2686 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
| * Merge pull request #2686 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developLarry Knox2020-07-131-1/+4
|/ | | | | * commit '800f93f7c994f88dfa716746153ded4b1e690e3a': Remove path to szip header file from AM_CPPFLAGS when configure check of libsz fails. Fix for HDFFV-10830.
* Merge pull request #2685 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:h5s_1_10 to ↵Dana Robinson2020-07-1015-770/+795
|\ | | | | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '443aa9a38f59bf4148925a86c07cfe14bac9e888': Moved over the H5S_hyper_diminfo_t from develop. Moved hyperslab code to use the new H5S_diminfo_valid_t enum. H5S_hyper_adjust_s() optimization from develop. Fixed Duff's device fall through warnings in hyperslab code. H5F and H5FS normalization with develop. Minor renaming in H5S hyperslab code.
| * Moved over the H5S_hyper_diminfo_t from develop.Dana Robinson2020-07-103-114/+124
| | | | | | | | | | Also fixed the issue with the H5S_diminfo_valid_t enum from the last commit.
| * Moved hyperslab code to use the new H5S_diminfo_valid_t enum.Dana Robinson2020-07-103-33/+50
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| * H5S_hyper_adjust_s() optimization from develop.Dana Robinson2020-07-092-24/+35
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| * Fixed Duff's device fall through warnings in hyperslab code.Dana Robinson2020-07-091-9/+16
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| * H5F and H5FS normalization with develop.Dana Robinson2020-07-0910-580/+563
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| * Minor renaming in H5S hyperslab code.Dana Robinson2020-07-092-15/+12
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* | Merge pull request #2682 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:h5s_1_10 to ↵Dana Robinson2020-07-0933-1245/+1340
|\ \ | |/ | | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '30c756decb6101704a925443d623301656ba60e4': Misc normalizations with develop. Added missing types to bin/trace after develop normalization. More normalization with H5S from develop. Continued normalization of H5S with develop. Normalization of H5MM and H5FL with develop. Adds the new stats calls. Further normalization of H5S with develop
| * Misc normalizations with develop.Dana Robinson2020-07-0914-540/+530
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| * Added missing types to bin/trace after develop normalization.Dana Robinson2020-07-091-0/+2
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| * More normalization with H5S from develop.Dana Robinson2020-07-093-121/+109
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| * Continued normalization of H5S with develop.Dana Robinson2020-07-0911-144/+136
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| * Normalization of H5MM and H5FL with develop. Adds the newDana Robinson2020-07-087-220/+445
| | | | | | | | stats calls.
| * Further normalization of H5S with developDana Robinson2020-07-089-220/+118
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* | Merge pull request #2681 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:h5s_1_10 to ↵Dana Robinson2020-07-0819-1864/+2302
|\ \ | |/ | | | | | | | | | | hdf5_1_10 * commit '76b579e142df42aa91d5ca5d66c6e413ec5ed608': Normalization of H5S package with develop
| * Normalization of H5S package with developDana Robinson2020-07-0819-1864/+2302
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* | Merge pull request #2679 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2020-07-073-10/+21
|\ \ | |/ |/| | | | | | | | | | | | | hdf5_1_10 * commit 'c0702f601eb4e0b4116a7ed02999746c20420cad': Change load path in libhdf5_java.dylib to unversioned libhdf5.dylib for junit tests on Macs. Merge pull request #2667 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop Merge pull request #2670 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
| * Change load path in libhdf5_java.dylib to unversioned libhdf5.dylib for ↵Larry Knox2020-07-071-1/+1
| | | | | | | | junit tests on Macs.
| * Merge pull request #2667 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developLarry Knox2020-07-061-6/+2
| | | | | | | | | | * commit '32c483cb86031962a09ecdb49dcb331d28dddee9': Copy lib files for junit.sh to temporary subdirectory of <build directory>/java/test instead of to the prefix/lib directory. Fix for HDFFV-11063.
| * Merge pull request #2670 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developLarry Knox2020-07-063-4/+19
| | | | | | | | | | * commit 'fc69de0e8ae30e80c1c3c542b156226a75444525': Lib files needed are now copied to a subdirectory in the java/test directory, and on Macs the loader path for libhdf5.xxxs.so is changed in the temporary copy of libhdf5_java.dylib. Fix for HDFFV-11063
* | Merge pull request #2675 in HDFFV/hdf5 from bmr_HDFFV-10591-v110 to hdf5_1_10Binh-Minh Ribler2020-07-074-31/+63
|\ \ | |/ |/| | | | | | | | | Fixed HDFFV-10591 (CVE-2018-17435) * commit 'bf3ef96e9d5a28e824d7e89b5af590b61f530944': Fix HDFFV-10591
| * Fix HDFFV-10591Binh-Minh Ribler2020-07-054-31/+63
|/ | | | | | | | | | | Description: h52gif produced a segfault when a buffer overflow occurred because the data size was corrupted and became very large. This commit added a check on the data size against the buffer size to prevent the segfault. It also added error reporting to h52gif to display an error message instead of silently exiting when the failure occurred. Platforms tested: Linux/64 (jelly)
* Merge pull request #2661 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2020-06-231-0/+2
|\ | | | | | | | | | | | | hdf5_1_10 * commit 'c8043ad61612671e938638f88c6310270e38d521': Fix MANIFEST
| * Fix MANIFESTDana Robinson2020-06-231-0/+2
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* Merge pull request #2651 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2020-06-222-0/+31
|\ | | | | | | | | | | | | | | | | hdf5_1_10 * commit '61d21839269b9e3902cd0a09c3f773ec5f41e280': Correct arg references HDFFV-11111 correct ifdef logic HDFFV-11111 add unimplemented errors in JNI
| * Correct arg referencesAllen Byrne2020-06-221-3/+3
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| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2020-06-2216-259/+367
| |\ | | | | | | | | | | | | | | | | | | * commit 'cafb6e572822c0a7bb985f237b600944f9fcdb3c': Reduce overhead for H5open, which is involved in the public symbols like H5T_NATIVE_INT, etc. H5PB and H5Faccum normalization with develop. H5F normalizations with develop.
| * | HDFFV-11111 correct ifdef logicAllen Byrne2020-06-181-2/+2
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| * | HDFFV-11111 add unimplemented errors in JNIAllen Byrne2020-06-182-0/+31
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* | | Merge pull request #2657 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2020-06-2212-63/+575
|\ \ \ | |_|/ |/| | | | | | | | | | | | | | hdf5_1_10 * commit 'e64ed323db7c98a246d3386a146f87003886040a': Merge pull request #2656 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:changes_1_12_merge to hdf5_1_12
| * | Merge pull request #2656 in HDFFV/hdf5 from ↵Larry Knox2020-06-2112-63/+575
| |/ | | | | | | | | | | | | | | | | ~LRKNOX/hdf5_lrk:changes_1_12_merge to hdf5_1_12 * commit '538b1317646f52658c2a896bbde4dce4246a9761': Squashed commit of the following: Addition of clang-warnings flags Update examples/teth5cc.sh.in for version 1.10.
* | Merge pull request #2658 in HDFFV/hdf5 from ↵Dana Robinson2020-06-2216-259/+367
|\ \ | |/ |/| | | | | | | | | | | | | ~DEROBINS/hdf5_der:1_10_normalization to hdf5_1_10 * commit '3c9eaf294fb1862af75837f0150990112c735530': Reduce overhead for H5open, which is involved in the public symbols like H5T_NATIVE_INT, etc. H5PB and H5Faccum normalization with develop. H5F normalizations with develop.
| * Reduce overhead for H5open, which is involved in the public symbols like ↵Dana Robinson2020-06-222-5/+32
| | | | | | | | H5T_NATIVE_INT, etc.
| * Merge branch 'hdf5_1_10' into 1_10_normalizationDana Robinson2020-06-203-6/+23
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* | Merge pull request #2645 in HDFFV/hdf5 from ↵Vailin Choi2020-06-153-6/+23
|\ \ | | | | | | | | | | | | | | | | | | ~VCHOI/my_third_fork:bugfix/110_HDFFV-10961-h5clear-usage-statement-give to hdf5_1_10 * commit '34d57480f69123e947d5b2d7b5b4cc3d62bb00c2': Merge pull request #2643 in HDFFV/hdf5 from ~VCHOI/my_third_fork:bugfix/HDFFV-10961-h5clear-usage-statement-give to develop
| * | Merge pull request #2643 in HDFFV/hdf5 from ↵Vailin Choi2020-06-113-6/+23
|/ / | | | | | | | | | | | | | | ~VCHOI/my_third_fork:bugfix/HDFFV-10961-h5clear-usage-statement-give to develop * commit '01b632c69ca1c97c2b0e1aaeeab1dd2362b580a6': Fix for HDFFV-10961: Couple changes to the tests' usage output files for h5clear. Fix for HDFFV-10961: add description to usage for --increment option.
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