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* [svn-r27038] Merge of r26393-27031 from the trunk.Dana Robinson2015-05-07246-4186/+5565
|\ | | | | | | Tested on 64-bit linux VM w/ C++ and Fortran 2003
| * [svn-r27031] Fix warnings in H5detect and clean up code, use unsigned variablesJerome Soumagne2015-05-061-149/+152
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Use H5_GCC_DIAG_ON/OFF to suppress larger-than and float-equal warnings Variables used with sigsetjmp/siglongjmp must be declared as volatile Remove unnecessary use of volatile after r24171 fix and fix prototypes Tested in release mode on: - jam (CentOS 5.11 i386 GCC 4.1.2) - ostrich (RHEL 6.6 ppc64 GCC 4.4.7) - local linux (OpenSuSE 13.2 x86_64 GCC 4.8.3) - local linux (Fedora 21 x86_64 GCC 4.9.2) - local linux (Fedora 21 x86_64 ICC 15.0.2) - local windows (Windows 8.1 x86_64 MSVC 2013 update 4) - lemur (MacOSX 10.10.3 x86_64 clang-602.0.49 Xcode 6.3.1) - ibm p95a07 (Ubuntu 14.10 ppc64le GCC 4.9.1) - ibm p95a07 (Ubuntu 14.10 ppc64le IBM XL C V13.1.1) - bluewaters (Cray PE 2.2.1 x86_64 GCC 4.8.2) - bluewaters (Cray PE 2.2.1 x86_64 Cray C 8.3.3) - bluewaters (Cray PE 2.2.1 x86_64 PGCC 14.2)
| * [svn-r27029] Fix bad comment in H5detect, this was preventing PGCC from ↵Jerome Soumagne2015-05-061-1/+1
| | | | | | | | | | | | compiling correctly. Tested on: bluewaters
| * [svn-r27015] updated with release changesAllen Byrne2015-05-051-1/+1
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| * [svn-r27009] Fix mismatching prototypes in H5FD/H5B2Jerome Soumagne2015-05-043-6/+6
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| * [svn-r27003] Update documentation to match the web instructionsAllen Byrne2015-05-041-41/+58
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| * [svn-r27000] Updated and debugged scriptAllen Byrne2015-05-041-1/+1
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| * [svn-r26997] Snapshot version 1.9 release 217HDF Tester2015-05-0315-98/+98
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| * [svn-r26996] Description:Quincey Koziol2015-05-022-11/+1
| | | | | | | | | | | | | | | | Eliminate unneccessary 'rdcc' field from common chunk info struct. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel (Too minor to require h5commitest)
| * [svn-r26995] Description:Quincey Koziol2015-05-022-27/+33
| | | | | | | | | | | | | | | | | | | | Clean up chunk 'prune by extent' and flush code, and make the rehashing routine 'update cache' hold onto more chunks, instead of evicting them as aggressively. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel (h5committest forthcoming)
| * [svn-r26993] Description:Quincey Koziol2015-05-025-45/+100
| | | | | | | | | | | | | | | | | | Align w/incoming chunk performance changes, including some small performance improvements here, as well as a few minor general code cleanups. Tested on: Mac OSX/64 10.10.3 (amazon) w/serial & parallel (Too minor to require h5committest)
| * [svn-r26986] Removed H5F_ACC_DEBUG and H5FD_DEBUG functionality.Dana Robinson2015-04-308-73/+45
| | | | | | | | | | | | | | | | | | | | | | | | The H5F_ACC_DEBUG symbol remains but has been defined to zero and has been listed as deprecated. Fixes: HDFFV-1074 Tested on: h5committest 32-bit Linux w/ C++ and Fortran and multi VFD 32-bit Linux w/ C++ and Fortran and multi VFD (no deprec symbols)
| * [svn-r26977] Windows needs different packaging option from linuxAllen Byrne2015-04-301-6/+14
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| * [svn-r26963] HDFFV-9298: make uninstall generated "test: argument expected" ↵Albert Cheng2015-04-298-4/+12
| | | | | | | | | | | | | | | | | | lines The error is that $EXAMPLETOPDIR is used without setting a value first. Solution is to set them with the proper values. Tested: jam only to confirm the error no longer exists.
| * [svn-r26961] Description:Quincey Koziol2015-04-291-48/+17
| | | | | | | | | | | | | | | | Clean up H5I code, to eliminate duplicated sections of code. Tested on: Mac OSX/64 10.10.3 (amazon) w/serial & parallel (Too minor to require h5committest)
| * [svn-r26953] Remove src temporary debug build props.Allen Byrne2015-04-285-42/+38
| | | | | | | | Move TOOLS option up before usage.
| * [svn-r26951] add cygwinAllen Byrne2015-04-281-5/+14
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| * [svn-r26949] Correct linux separatorsAllen Byrne2015-04-281-11/+11
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| * [svn-r26944] Match src folder versionAllen Byrne2015-04-281-3/+7
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| * [svn-r26941] Correct ext lib packing listAllen Byrne2015-04-281-2/+6
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| * [svn-r26936] Incorrect use of HSIZE_T_FORMAT macro, needed to be sub macro ↵Allen Byrne2015-04-271-3/+3
| | | | | | | | | | | | H5_PRINTF_LL_WIDTH. Tested: local linux
| * [svn-r26929] Added support for shared lib and zlib.Albert Cheng2015-04-271-5/+17
| | | | | | | | Tested: linux (jam), Mac (osx1010dev)
| * [svn-r26926] Fixed previous typo in the installation of DMG file.Albert Cheng2015-04-271-1/+1
| | | | | | | | Tested: osx1010dev
| * [svn-r26925] Added method to install the Mac OSX DMG file by line commands.Albert Cheng2015-04-271-1/+36
| | | | | | | | | | | | Group all install method into a function call for easier maintenance. Tested: Linux (jam, platypus), Mac (osx1010dev)
| * [svn-r26924] Remove old and invalid information:Albert Cheng2015-04-271-48/+2
| | | | | | | | | | | | Retired IBM SP system which was old. Removed --enable-parallel=mpich information. The option is invalid now (remove date unknown.)
| * [svn-r26907] Check range and fix conversion issue of compound members in ↵Jerome Soumagne2015-04-231-9/+25
| | | | | | | | | | | | H5T_copy/H5T_set_loc Tested: local linux
| * [svn-r26906] Correct typoAllen Byrne2015-04-231-1/+1
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| * [svn-r26905] Add user scripts to CMake folderAllen Byrne2015-04-233-0/+446
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| * [svn-r26900] Update CMake doc referencesAllen Byrne2015-04-233-79/+156
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| * [svn-r26868] Remove accum_change assert in H5T for nowJerome Soumagne2015-04-211-2/+2
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| * [svn-r26864] Change location of lib settings fileAllen Byrne2015-04-211-1/+1
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| * [svn-r26857] Bugs:Albert Cheng2015-04-211-3/+5
| | | | | | | | | | | | | | | | | | | | The configure summary (libhdf5.settings) was missing from the configure output. Solution: Append the configure summary to the configure logfile if configure succeeds. Tested: hand ran cmakehdf5 in jam and inspected the logfile.
| * [svn-r26852] Correct component matchingAllen Byrne2015-04-201-11/+9
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| * [svn-r26848] Fix warnings in H5TJerome Soumagne2015-04-201-31/+115
| | | | | | | | Tested: local linux
| * [svn-r26843] Description:Quincey Koziol2015-04-194-6/+30
| | | | | | | | | | | | | | | | Minor code & warning cleanups. Tested on: MacOSX/64 10.10.2 (amazon) w/serial & parallel Linux/32 2.6.18 (jam) w/serial & parallel
| * [svn-r26842] Description:Quincey Koziol2015-04-1810-123/+131
| | | | | | | | | | | | | | | | | | | | Cache the dataset's rank & dimension sizes, instead of querying them frequently, to speed up various checks & algorithms. Also, a few minor cleanups. Tested on: MacOSX/64 10.10.2 (amazon) w/serial & parallel Linux/32 2.6.18 (jam) w/serial & parallel
| * [svn-r26841] Description:Quincey Koziol2015-04-184-7/+5
| | | | | | | | | | | | | | | | Minor formatting cleanups and remove unused field from callback struct. Tested on: Mac OSX/64 10.10.2 (amazon) w/serial & parallel (Too minor to require h5committest)
| * [svn-r26840] configureLarry Knox2015-04-178-78/+174
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | configure.ac hl/src/H5LTparse.c hl/src/H5LTparse.h Address HDFFV-9010: configure issue with gcc 4.9.2 "-l ". Change default to disable_shared on CYGWIN. release_docs/INSTALL_Cygwin.txt release_docs/RELEASE.txt Update for changed default and no CYGWIN szip binary. c++/src/cpp_doc_config bin/h5vers AddressHDFFV-9010: Add cpp_doc_config to h5vers Tested with h5committest, on CYGWIN.
| * [svn-r26837] Description:Quincey Koziol2015-04-176-341/+490
| | | | | | | | | | | | | | | | | | | | Separate allocating chunk on disk from inserting the chunk record into the index. This allows a "SWMR-safe" insert/update of chunks (the chunk is always allocated -> written -> inserted/updated in the index). Tested on: Mac OSX/64 10.10.2 (amazon) w/parallel & serial Linux/32 2.6.18 (jam) w/serial & parallel
| * [svn-r26823] Update instruction that changes in this releaes that " ↵Albert Cheng2015-04-161-5/+4
| | | | | | | | | | | | | | --enable-parallel has to be used explicitly to build parallel HDF5 regardless of the compiler type being used. (MSC - 2015/02/19 HDFFV-9068)"
| * [svn-r26815] Update cmake configuration checksAllen Byrne2015-04-153-75/+1
| | | | | | | | Tested: local linux
| * [svn-r26812] Removed printf debugging statements.Scot Breitenfeld2015-04-151-2/+0
| | | | | | | | Tested: trival.
| * [svn-r26803] Fixed a minor typo in H5R code comment.Dana Robinson2015-04-141-1/+1
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| * [svn-r26786] In libhdf5.settings.in, changed the C++ shared library setting ↵Dana Robinson2015-04-131-1/+1
| | | | | | | | | | | | | | | | variable from H5_CXX_SHARED (which no longer exists) to enable_static. Tested on: jam (configure only - minor change)
| * [svn-r26785] Snapshot version 1.9 release 216HDF Tester2015-04-1212-23/+23
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| * [svn-r26782] Remove md5 from METHODS arguments for calling bin/release ↵Larry Knox2015-04-121-2/+2
| | | | | | | | script from snapshot script. md5 method was removed and md5 checksums are always produced for all compression methods.
| * [svn-r26778] fix path to configAllen Byrne2015-04-101-2/+2
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| * [svn-r26777] - Fix usage of the internal AC global dxplsMohamad Chaarawi2015-04-1018-250/+259
| | | | | | | | | | | | - allocate sieve buffer with calloc instead of malloc tested with h5committest
| * [svn-r26776] Add missing quote char.Allen Byrne2015-04-101-1/+1
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| * [svn-r26772] Fixed wrong fapl for H5Fopen when testing H5Iget_name with ↵Scot Breitenfeld2015-04-091-1/+1
| | | | | | | | | | | | anonymously created datatype. Tested: jam (using split virtual driver)
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