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* Merge pull request #1488 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Larry Knox2019-01-212-13/+13
|\ | | | | | | | | | | | | | | hdf5_1_10 * commit 'c817bcdf0d345c8dbd2943be44b55db290cfd09f': MPI vars need passed in, change to grepTest Add parallel runtest for examples
| * MPI vars need passed in, change to grepTestAllen Byrne2019-01-204-339/+11
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| * Add parallel runtest for examplesAllen Byrne2019-01-193-4/+332
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* | Merge pull request #1486 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2019-01-205-9/+128
|\ \ | |/ |/| | | | | | | | | hdf5_1_10 * commit '7880089c0be7eb6625cc9982775b522aee523b65': Merge pull request #1450 in HDFFV/hdf5 from ~SONGYULU/hdf5_ray:TRILAB-98-dt_arith-and-cpp_testhdf5-tests to develop
| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Larry Knox2019-01-197-60/+73
| |\ | |/ |/| | | | | * commit '89b5b64b5c2db40e89e3304fa138de7c2ad1483f': Fix CMake policy 54 warnings
* | Merge pull request #1487 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2019-01-197-60/+73
|\ \ | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '9f61f559d1541066b07c02609579bf053099ab90': Fix CMake policy 54 warnings
| * | Fix CMake policy 54 warningsAllen Byrne2019-01-187-60/+73
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| * Merge pull request #1450 in HDFFV/hdf5 from ↵Ray Lu2019-01-185-9/+128
|/ | | | | | | | | ~SONGYULU/hdf5_ray:TRILAB-98-dt_arith-and-cpp_testhdf5-tests to develop * commit 'b02de315b93ac29d2483a91d526b110a25073505': NNSA Tri-LabsTRILAB-98: Another two test cases out. NNSA Tri-Labs TRILAB-98: Taking out a few more test cases. NNSA Tri-Labs TRILAB-98 dt_arith and cpp_testhdf5 tests fail on sierra.llnl.gov: According to the group decision, simply provide a macro to disable some failing test cases on sierra (IBM power9 cpu). All failing cases involve long double data type.
* Merge pull request #1478 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2019-01-151-2/+4
|\ | | | | | | | | | | | | hdf5_1_10 * commit '0250b3650fbcec1f592f4a7371158d6b81db01c0': Add check for existing links in hl/fortran/src/Makefile.am.
| * Merge branch 'hdf5_1_10' of ↵Larry Knox2019-01-151-1/+1
| |\ | |/ |/| | | https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into hdf5_1_10
* | Merge pull request #1477 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2019-01-141-1/+1
|\ \ | | | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '1b2fc19a8f46bff2d1ac8e25dbb40322d377eef3': Correct fix for new policy Fix for new policy
| * | Correct fix for new policyAllen Byrne2019-01-141-1/+1
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| * | Fix for new policyAllen Byrne2019-01-141-1/+1
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| * | Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2019-01-144-14/+62
| |\ \ | |/ / |/| | | | | | | | | | | | | | * commit '3476c7d13d4124f7e0752f251a667bef6b4fbf68': Merge pull request #1429 in HDFFV/hdf5 from HDFFV-10596-fortran-library-names-differ to develop Work around compiler fussiness on platypus. Fix for debug assert in H5FDmpio.c
* | | Merge pull request #1475 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2019-01-142-0/+22
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit 'e61b3a7de95c23f4f24282bad41c5154643741a5': Merge pull request #1429 in HDFFV/hdf5 from HDFFV-10596-fortran-library-names-differ to develop
| | * \ Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2019-01-1128-246/+1835
| | |\ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'dadf2b5fd8689e15ee5d28c74a5956391e914809': Fix for parallel filters tests with new read-proc0-broadcast feature misc. merge clean-up misc. merge clean-up Fix for Fortran failures. merged:
| | * \ \ Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2019-01-0916-30/+305
| | |\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'a043211d9edf2df3ea8049bda4be6bdcbf0970e9': Delay checking if decoded message's "shareable" flag is appropriate for the message type until we've verified we understand the message type. Reduce size of H5O_msg_class_g to *not* include space for H5O_BOGUS_INVALID. Make bogus messages shareable. Add new bogus message test with shareable messages to cover the formerly problematic code. Re-run gen_bogus.c to add this test case and also to fix the bogus_invalid messages that were no longer H5O_BOGUS_INVLAID due to a new message class being added in a previous commit. Added comment to remind developers to run gen_bogus.c when adding a new message class. Remove H5O_BOGUS_INVALID_ID from H5O_msg_class_g initialization, since space for it was removed. Fortran wrappers for dataset obj header minimization API calls.
| | | | | * Add check for existing links in hl/fortran/src/Makefile.am.Larry Knox2019-01-151-2/+4
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| * | | | Merge pull request #1429 in HDFFV/hdf5 from ↵Larry Knox2019-01-142-0/+22
|/ / / / | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | HDFFV-10596-fortran-library-names-differ to develop * commit 'f4c9ec5d41aa53829617274d3286f1e9a45ae57e': Add RELEASE.txt entry for HDFFV-10596. Uninstall should remove the libhdf5_hl_fortran links. Add symlinks named libhdf5_hl_fortran* to libhdf5hl_fortran in Makefile.am to match cmake install and the name pattern for other hl lib files.
* | | | Merge pull request #1474 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2019-01-141-13/+39
|\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '1ba63f95d3d600be43f2d3e00f204d36d6e9a1a4': Work around compiler fussiness on platypus.
| * | | | Work around compiler fussiness on platypus.Quincey Koziol2019-01-141-13/+39
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* | | | Merge pull request #1473 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:hdf5_1_10 to ↵Dana Robinson2019-01-141-1/+1
|\ \ \ \ | |_|_|/ |/| | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '110eabd3e559a1e6002e96633a9ac892c21c1211': Fix for debug assert in H5FDmpio.c
| * | | Fix for debug assert in H5FDmpio.cDana Robinson2019-01-141-1/+1
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* | | Merge pull request #1470 in HDFFV/hdf5 from hdf5_10_0_squash to hdf5_1_10Scot Breitenfeld2019-01-1127-242/+1831
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'c9cf24506b4fb1c50ea553d3ab962c37ac86760a': Fix for parallel filters tests with new read-proc0-broadcast feature misc. merge clean-up misc. merge clean-up merged:
| * | | Fix for parallel filters tests with new read-proc0-broadcast featureJordan Henderson2019-01-111-4/+8
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| * | | misc. merge clean-upM. Scot Breitenfeld2019-01-111-3/+0
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| * | | misc. merge clean-upM. Scot Breitenfeld2019-01-113-47/+40
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| * | | merged:M. Scot Breitenfeld2019-01-1027-218/+1813
| | |/ | |/| | | | | | | | | | HDFFV-10652 HDFFV-10443
* | | Merge pull request #1469 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:hdf5_1_10 to ↵Dana Robinson2019-01-111-4/+4
|\ \ \ | |/ / |/| | | | | | | | | | | | | | hdf5_1_10 * commit 'b52def6b9a38e6b24848d69e5eb37da0be97a94c': Fix for Fortran failures.
| * | Fix for Fortran failures.Dana Robinson2019-01-111-4/+4
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* | Merge pull request #1457 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2019-01-099-528/+515
|\ \ | |/ | | | | | | | | | | | | | | hdf5_1_10 * commit '46f63b0faafe574ca2a32380ea85cac8206b1028': Fix deprecated H5Pget_version Fix java regex Merge CMake changes from develop
| * Fix deprecated H5Pget_versionAllen Byrne2019-01-094-52/+24
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| * Fix java regexAllen Byrne2019-01-091-36/+36
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| * Merge CMake changes from developAllen Byrne2019-01-085-476/+491
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* | Merge pull request #1459 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:hdf5_1_10 to ↵Dana Robinson2019-01-097-5/+252
|\ \ | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '688074781ac7be2b7e799e8804378ba1f1563db1': Fortran wrappers for dataset obj header minimization API calls.
| * | Fortran wrappers for dataset obj header minimization API calls.Dana Robinson2019-01-097-5/+252
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* | Merge pull request #1463 in HDFFV/hdf5 from ~NFORTNE2/hdf5_naf:hdf5_1_10 to ↵Neil Fortner2019-01-099-25/+53
|\ \ | |/ |/| | | | | | | | | | | hdf5_1_10 * commit '55806ff1be0d559a204e84e595403b309239085f': Delay checking if decoded message's "shareable" flag is appropriate for the message type until we've verified we understand the message type. Reduce size of H5O_msg_class_g to *not* include space for H5O_BOGUS_INVALID. Make bogus messages shareable. Add new bogus message test with shareable messages to cover the formerly problematic code. Re-run gen_bogus.c to add this test case and also to fix the bogus_invalid messages that were no longer H5O_BOGUS_INVLAID due to a new message class being added in a previous commit. Added comment to remind developers to run gen_bogus.c when adding a new message class. Remove H5O_BOGUS_INVALID_ID from H5O_msg_class_g initialization, since space for it was removed.
| * Delay checking if decoded message's "shareable" flag is appropriate forNeil Fortner2019-01-098-19/+52
| | | | | | | | | | | | | | | | | | | | | | | | | | | | the message type until we've verified we understand the message type. Reduce size of H5O_msg_class_g to *not* include space for H5O_BOGUS_INVALID. Make bogus messages shareable. Add new bogus message test with shareable messages to cover the formerly problematic code. Re-run gen_bogus.c to add this test case and also to fix the bogus_invalid messages that were no longer H5O_BOGUS_INVLAID due to a new message class being added in a previous commit. Added comment to remind developers to run gen_bogus.c when adding a new message class. Remove H5O_BOGUS_INVALID_ID from H5O_msg_class_g initialization, since space for it was removed.
| * Remove H5O_BOGUS_INVALID_ID from H5O_msg_class_g initialization, sinceNeil Fortner2019-01-091-6/+1
|/ | | | space for it was removed.
* Merge pull request #1449 in HDFFV/hdf5 from ↵Larry Knox2019-01-082-14/+14
|\ | | | | | | | | | | | | ~JAKE.SMITH/hdf5:dset_ohdr_minimize_110 to hdf5_1_10 * commit '00f835f6403728c3caf298636522e526996010a2': Fix fapl passed into h5_fixname() calls in minimized tests. Fix creation of duplicate, unclosed FAPL. Fix wrong statement-string after TEST_ERROR macro (refactoring mistake).
| * Fix fapl passed into h5_fixname() calls in minimized tests.Jacob Smith2019-01-072-14/+14
| | | | | | | | | | Fix creation of duplicate, unclosed FAPL. Fix wrong statement-string after TEST_ERROR macro (refactoring mistake).
* | Merge pull request #1442 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:hdf5_1_10 to ↵Vailin Choi2019-01-0710-20/+316
|\ \ | |/ |/| | | | | | | | | | | | | | | hdf5_1_10 * commit '1a50622733c14d89b3fd8c6bab684af9205a3b96': Fix for daily test failure: too many arguments to function 'H5Gopen1'. Fix the git merge leftover in RELEASE.txt. Fix the git merge leftovers in RELEASE.txt. Fix for HDFFV-10659: The library aborts with "infinite loop closing library" after deleting attributes in densed storage. The fix: When deleting attribute nodes from the name index v2 B-tree, if an attribute is found in the intermediate B-tree nodes, which may be merged/redistributed in the process, we need to free the dynamically allocated spaces for the intermediate decoded attribute.
| * Fix for daily test failure: too many arguments to function 'H5Gopen1'.vchoi2019-01-071-1/+1
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| * Fix the git merge leftover in RELEASE.txt.Vailin Choi2019-01-061-0/+1
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| * Fix the git merge leftovers in RELEASE.txt.Vailin Choi2019-01-061-5/+0
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| * Fix for HDFFV-10659: The library aborts with "infinite loop closing library"Vailin Choi2019-01-0610-20/+320
| | | | | | | | | | | | | | | | after deleting attributes in densed storage. The fix: When deleting attribute nodes from the name index v2 B-tree, if an attribute is found in the intermediate B-tree nodes, which may be merged/redistributed in the process, we need to free the dynamically allocated spaces for the intermediate decoded attribute.
* | Merge pull request #1447 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2019-01-0722-125/+476
|\ \ | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit 'f7d530dd275e176e59b26c1b7363ba16b3ab6c9c': HDFFV-10674, 10664, 10674
| * | HDFFV-10674, 10664, 10674Allen Byrne2019-01-0722-125/+476
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* | Merge pull request #1446 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:hdf5_1_10 to ↵Dana Robinson2019-01-077-7/+85
|\ \ | |/ |/| | | | | | | | | hdf5_1_10 * commit '257e05e1b2465a6876eec6995419b8f358e0ec84': Merged the rest of the parallel flush test code.
| * Merged the rest of the parallel flush test code.Dana Robinson2019-01-077-7/+85
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