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* HDFFV-9055 add test filesAllen Byrne2017-05-176-9/+54
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* HDFFV-9055 Handle H5T_ARRAY typesAllen Byrne2017-05-161-257/+171
| | | | Create variables just for diff_array function Whitespace updates
* Merge pull request #519 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-1614-127/+153
|\ | | | | | | | | | | * commit '71637634ac96b6167b384ebb461ce3b9ea66b4f8': HDFFV-9995 Clarify help text HDFFV-10128 Fixed string length with no null fixed
| * HDFFV-9995 Clarify help textAllen Byrne2017-05-1611-111/+144
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| * HDFFV-10128 Fixed string length with no null fixedAllen Byrne2017-05-163-16/+9
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* Merge pull request #516 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developLarry Knox2017-05-156-41/+108
|\ | | | | | | | | | | * commit '56c3ec98207bb6c4b3e6a7b9523c2a1e849879c3': HDFFV-10128 add test to check null term Test is another dataset HDFFV-10128 Fix null term strings
| * HDFFV-10128 add test to check null termAllen Byrne2017-05-156-37/+94
| | | | | | Test is another dataset
| * HDFFV-10128 Fix null term stringsAllen Byrne2017-05-121-7/+17
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* | Merge pull request #515 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2017-05-152-344/+831
|\ \ | |/ |/| | | | | | | | | develop * commit '54dff331778a660824961fdf6359e4eae998a13c': Incorporate additional code changes for the H5DOread_chunk patch from GE Heathcare (HDFFV-9934) This is the similar set of changes that was checked in to 1.8 branch: Incorporate the code changes that were missing from the original patch: (1) Additional tests in hl/test/test_dset_opt.c (2) Fix in src/H5Dchunk.c for direct access when an entry is in chunk cache but not dirty Tested on platypus, ostrich, kituo, mayll, osx1010test, moohan, quail, emu.
| * Incorporate additional code changes for the H5DOread_chunk patch from GE ↵Vailin Choi2017-05-152-344/+831
|/ | | | | | | | | | Heathcare (HDFFV-9934) This is the similar set of changes that was checked in to 1.8 branch: Incorporate the code changes that were missing from the original patch: (1) Additional tests in hl/test/test_dset_opt.c (2) Fix in src/H5Dchunk.c for direct access when an entry is in chunk cache but not dirty Tested on platypus, ostrich, kituo, mayll, osx1010test, moohan, quail, emu.
* Merge pull request #512 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop to developDana Robinson2017-05-122-5/+125
|\ | | | | | | | | * commit 'f95ef72a5e9827dfa63e4722938a58a8c9d686c0': Merged HDFFV-10187 direct chunk overwrite bugfix to develop from 1.10 branch.
| * Merged HDFFV-10187 direct chunk overwrite bugfix to develop from 1.10 branch.Dana Robinson2017-05-122-5/+125
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* Merge pull request #506 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-112-0/+4
|\ | | | | | | | | * commit '0cb8152b8e97d659e076b42340509c41b3919754': HDFFV-10186 Need to pull the flag into the script
| * HDFFV-10186 Need to pull the flag into the scriptAllen Byrne2017-05-112-0/+4
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* Merge pull request #503 in HDFFV/hdf5 from ↵Allen Byrne2017-05-1026-147/+601
|\ | | | | | | | | | | | | | | | | | | | | ~BYRN/hdf5_adb:bugfix/HDFFV-10186-tbitnopaque-test to develop * commit 'ec0935a924a84b18b29473b4fcec7c3f4e1aca76': HDFFV-10186 xml test also needs endianess aware files HDFFV-10186 - h5tools_str_append is not printf HDFFV-10186 braces formatting Fix reference file contents HDFFV-10186 Add endianess to bitfield and fix tests
| * HDFFV-10186 xml test also needs endianess aware filesAllen Byrne2017-05-105-7/+123
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| * HDFFV-10186 - h5tools_str_append is not printfAllen Byrne2017-05-101-3/+3
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| * HDFFV-10186 braces formattingAllen Byrne2017-05-101-72/+59
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| * Fix reference file contentsAllen Byrne2017-05-101-1/+1
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| * HDFFV-10186 Add endianess to bitfield and fix testsAllen Byrne2017-05-1023-83/+434
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* | Merge pull request #505 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developLarry Knox2017-05-101-1/+1
|\ \ | |/ |/| | | | | * commit 'c8a5520d3aa3a526460c81507f2f985dc534b14f': Call to H5Dopen has H5dopen2 arguments at line 12704 of test/dsets.c - changed to H5Dopen2 to fix failure with --with-default-api-version=v16 configure option.
| * Call to H5Dopen has H5dopen2 arguments at line 12704 of test/dsets.c -lrknox2017-05-101-1/+1
|/ | | | | changed to H5Dopen2 to fix failure with --with-default-api-version=v16 configure option.
* Merge pull request #501 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-104-281/+229
|\ | | | | | | | | * commit 'e4e261173f85de6f83651abd6950793d7b930a20': HDFFV-10186 more whitespace formatting
| * HDFFV-10186 more whitespace formattingAllen Byrne2017-05-104-281/+229
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* Merge pull request #497 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-107-807/+746
|\ | | | | | | | | * commit '4f36f613a6de09d8ec197b7e5a4a72dbdb9417a2': HDFFV-10186 Whitespace change Mostly tabs to spaces Remove Modifications comments
| * HDFFV-10186 Whitespace changeAllen Byrne2017-05-097-807/+746
| | | | | | | | Mostly tabs to spaces Remove Modifications comments
* | Merge pull request #498 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2017-05-091-0/+1
|\ \ | |/ |/| | | | | | | | | develop * commit '8482314d7db83c47947af8ca50457cdb1ddae366': Fix for HDFFV-10051 Fix missing declaration for H5D__layout_compact_dirty_test(). Tested on mayll and osx1010test.
| * Fix for HDFFV-10051Vailin Choi2017-05-091-0/+1
|/ | | | | Fix missing declaration for H5D__layout_compact_dirty_test(). Tested on mayll and osx1010test.
* Merge pull request #494 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2017-05-094-9/+172
|\ | | | | | | | | | | | | | | develop * commit 'd436db6c6efdfe7e9dbe06a642715116ef0eb5e3': Fix for the two issues reported in HDFFV-10051 Modifications made based on the review comments from pull request #494 Tested on moohan, mayll, kituo, platypus, ostrich, osx1010test, quail, emu. Fix for the two issues reported in HDFFV-10051: (1) Repeated open/close of a compact dataset fails due to the increment of ndims in the dataset structure for every open. --This is done only for chunked dataset via H5D__chunk_set_sizes(). (2) layout "dirty" flag for a compact dataset is not reset properly after flushing the data at dataset close. --Reset the "dirty" flag before flushing the message to the object header via H5O_msg_write(). Tested on moohan, kituo, platypus, ostrich, osx1010test, quail, emu.
| * Fix for the two issues reported in HDFFV-10051Vailin Choi2017-05-093-14/+50
| | | | | | | | | | Modifications made based on the review comments from pull request #494 Tested on moohan, mayll, kituo, platypus, ostrich, osx1010test, quail, emu.
| * Fix for the two issues reported in HDFFV-10051:Vailin Choi2017-05-073-3/+130
| | | | | | | | | | | | | | | | | | | | | | (1) Repeated open/close of a compact dataset fails due to the increment of ndims in the dataset structure for every open. --This is done only for chunked dataset via H5D__chunk_set_sizes(). (2) layout "dirty" flag for a compact dataset is not reset properly after flushing the data at dataset close. --Reset the "dirty" flag before flushing the message to the object header via H5O_msg_write(). Tested on moohan, kituo, platypus, ostrich, osx1010test, quail, emu.
* | Merge pull request #496 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-093-1483/+1431
|\ \ | |/ |/| | | | | * commit '5263bc9029dcf06779a0ec2b89688912443a4bfa': HDFFV-10186 Whitespace changes Mostly replacing tabs with spaces Removed empty mod sections
| * HDFFV-10186 Whitespace changesAllen Byrne2017-05-093-1483/+1431
|/ | | | Mostly replacing tabs with spaces Removed empty mod sections
* Merge pull request #491 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developLarry Knox2017-05-052-336/+791
|\ | | | | | | | | | | * commit '28f4873e7fc93de865c3e180f09d7221569f64ff': Update one missed version string. Update release_docs/HISTORY-1_10.txt and RELEASE.txt after HDF5 1.10.1 release.
| * Update one missed version string.lrknox2017-05-051-1/+1
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| * Update release_docs/HISTORY-1_10.txt and RELEASE.txt after HDF5 1.10.1lrknox2017-05-052-335/+790
| | | | | | | | release.
* | Merge pull request #493 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-051-1/+1
|\ \ | |/ |/| | | | | * commit '6d0d9d46dab559c04bba0b8810a3e0630ce44ad2': Fix typo in name of ddl file in command
| * Fix typo in name of ddl file in commandAllen Byrne2017-05-051-1/+1
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* Merge pull request #490 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-051-1/+1
|\ | | | | | | | | * commit '9076e74d38f10d9d71a41ceeb118777468b6b530': Fix name to copy
| * Fix name to copyAllen Byrne2017-05-051-1/+1
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* Merge pull request #488 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-041-1/+1
|\ | | | | | | | | * commit 'c90f72a0d44ab53d16e0c7979363565dff30cf24': Correct name of file to copy
| * Correct name of file to copyAllen Byrne2017-05-041-1/+1
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* Merge pull request #487 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-043-34/+35
|\ | | | | | | | | * commit '412f68103ecc9e75a895dd057ad28d0e456f3a58': Use correct var types for data
| * Use correct var types for dataAllen Byrne2017-05-043-34/+35
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* Merge pull request #486 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-0417-367/+421
|\ | | | | | | | | | | | | * commit '006e56802196ee6a43261aec7027815ad24ad3db': Remove duplicate defines Add test file to list and fix test typo Make test scripts fail if result files are created
| * Remove duplicate definesAllen Byrne2017-05-042-18/+0
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| * Add test file to list and fix test typoAllen Byrne2017-05-021-1/+3
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| * Make test scripts fail if result files are createdAllen Byrne2017-05-0215-348/+418
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* Merge pull request #482 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developLarry Knox2017-05-025-10/+10
|\ | | | | | | | | * commit 'be49a9422654ac9eec07ffe3599b4a7f7561cdb6': Comment out install-exec-hooks to remove libdynlib* files. Allen did the same for hdf5_1_10 and hdf5_1_10_1 because the hooks don't reliably work. In the develop branch they are causing make install failures because the autotools' install commands sometimes attempt to chmod these files when they no longer exist.
| * Comment out install-exec-hooks to remove libdynlib* files. Allen didlrknox2017-04-285-10/+10
|/ | | | | | | the same for hdf5_1_10 and hdf5_1_10_1 because the hooks don't reliably work. In the develop branch they are causing make install failures because the autotools' install commands sometimes attempt to chmod these files when they no longer exist.
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