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* [svn-r24255] Description:Quincey Koziol2013-10-0414-415/+402
| | | | | | | | Switch H5I internal data structure from using hash table to skip lists. Tested on: Mac OSX 10.8.4 (amazon) w/C++ & FORTRAN FreeBSD, Linux, etc. forthcoming
* [svn-r24253] Add var for install fileAllen Byrne2013-10-021-3/+4
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* [svn-r24252] add log varsAllen Byrne2013-10-021-2/+14
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* [svn-r24251] Add packaging to processAllen Byrne2013-10-021-0/+13
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* [svn-r24250] Updated version numbers and notes about CTest ScriptingAllen Byrne2013-10-022-35/+53
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* [svn-r24240] Update WDTP test machinesAllen Byrne2013-10-011-8/+8
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* [svn-r24238] Update list of generated files for clear-objectsAllen Byrne2013-10-011-6/+8
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* [svn-r24235] Description:Binh-Minh Ribler2013-10-0111-15/+22
| | | | | | | | | | | | | - Appended h5tutr_ to names of data files to avoid name clashing with existing examples. - Added example dependencies to Makefile.* (pointed out by Allen) Platforms tested: SunOS 5.11 (emu) with gmake Linux/ppc64 (ostrich) Linux/32 2.6 (jam) Linux/64 2.6 (koala)/PGI compilers
* [svn-r24234] Bug: tfile.c was failing in the ADA AIX system.Albert Cheng2013-09-301-1/+1
| | | | | | | | | The reason was typo in the index variable in the newly added test_get_obj_ids(). Solution: fixed the typo. Tested: AIX machine. (Did not run h5committest because the fix is in a remote machine and the fix is quite obvious.)
* [svn-r24227] Add new examples to cmake listsAllen Byrne2013-09-302-0/+50
| | | | Tested: local linux
* [svn-r24224] HDFFV-8529: Space separate define stringsAllen Byrne2013-09-304-9/+9
| | | | Tested: h5committest
* [svn-r24221] Bug ID: HDFFV-8512Albert Cheng2013-09-301-8/+5
| | | | | | | | | Mailing lists instructions are incorrect. Fix by removing hdf5dev which has long retired (2009). Subscription requests should be sent to new address due to server change. Tested: tried to subscribe myself and it worked.
* [svn-r24218] Snapshot version 1.9 release 165HDF Tester2013-09-2913-26/+26
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* [svn-r24214] Put in proper error message if unexpected switch values happened.Albert Cheng2013-09-281-1/+2
| | | | Tested: h5committest.
* [svn-r24210] Jira issue 8528: H5Fget_obj_ids overfilled the list of object ↵Raymond Lu2013-09-272-14/+104
| | | | | | | | | IDs by one. I moved the safeguard in H5F_get_objects_cb to the beginning of the function to prevent overfill the list. I added a new test case for this problem and fix in tfile.c. Tested with h5committest.
* [svn-r24202] Bug fix: HDFFV-8271 Big.c error in address generated by random ↵Albert Cheng2013-09-261-1/+2
| | | | | | | | | | | | | | | | | | number. Description: There is a bug in the current big.c tests. In a nut-shell, the writing part randomly picks 50 locations and write 4KB from that location. Random location range is from byte 0 to end of dataset. There is the problem--if the random location is greater than (end of dataset - 4KB), then error. Solution: Adjust the random number to be at least 4KB less than the end of the dataset. That allows it write 4KB more from the generated starting position. Tested: h5comittest plus jam serial build and test.
* [svn-r24200] Updated cygwin versionsAllen Byrne2013-09-251-2/+2
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* [svn-r24198] Change Internal CDash site.Allen Byrne2013-09-251-2/+2
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* [svn-r24197] revert a changed committed by mistake, printf statementBinh-Minh Ribler2013-09-251-3/+1
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* [svn-r24195] Description:Binh-Minh Ribler2013-09-249-42/+83
| | | | | | | | - Improved format/comments in tutorial examples - Added them to Makefile.* and run-c++-ex.sh.in Platforms tested: Linux/32 2.6 (jam) Linux/64 2.6 (koala)/PGI compilers
* [svn-r24194] Don't add hdf5 library dependencies to lib files when ↵Larry Knox2013-09-2447-20/+113
| | | | | | --disable-sharedlib-rpath configure option is invoked. Fix for HDFFV-8276. Tested with h5committest and on hdf-duck.
* [svn-r24192] Correct test and usage of defines for cmake configureAllen Byrne2013-09-232-2/+6
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* [svn-r24190] remove comment that caused linux build warnings and correct use ↵Allen Byrne2013-09-232-40/+42
| | | | | | of cmakedefine vs define in template. Tested: local linux
* [svn-r24189] Purpose: Fixed bug HDFFV-1060Binh-Minh Ribler2013-09-2330-90/+90
| | | | | | | | Description: Changed header guards from single underscore to double underscore. Platforms tested: Linux/32 2.6 (jam) - very minor Linux/64 2.6 (koala)/PGI compilers
* [svn-r24188] Purpose: Fixed bug introduced in r24163Binh-Minh Ribler2013-09-2321-560/+996
| | | | | | | | | | | | | Description: - The failure in daily test was caused by missing initialization of member "id" in a few constructors. This is now fixed. - Added two overloaded H5Location::setComment - Improved some error reporting in H5Location - Improved error reporting in tests Platforms tested: Linux/32 2.6 (jam) SunOS 5.11 (emu) Linux/64 2.6 (koala)/PGI compilers
* [svn-r24186] Snapshot version 1.9 release 164HDF Tester2013-09-2213-26/+26
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* [svn-r24179] HDFFV-8321:Add note about changing FFLAGS to FCFLAGS in configure.Allen Byrne2013-09-201-0/+1
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* [svn-r24178] Back out the changes that cause daily test to fail r24163Binh-Minh Ribler2013-09-2017-905/+375
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* [svn-r24175] Description:Binh-Minh Ribler2013-09-201-0/+9
| | | | | | | | | | | | | | | Added the tutorial examples ./c++/examples/h5tutr_cmprss.cpp ./c++/examples/h5tutr_crtatt.cpp ./c++/examples/h5tutr_crtdat.cpp ./c++/examples/h5tutr_crtgrpar.cpp ./c++/examples/h5tutr_crtgrp.cpp ./c++/examples/h5tutr_crtgrpd.cpp ./c++/examples/h5tutr_extend.cpp ./c++/examples/h5tutr_rdwt.cpp ./c++/examples/h5tutr_subset.cpp Verified with bin/chkmanifest
* [svn-r24174] Purpose: Add examplesBinh-Minh Ribler2013-09-209-0/+1104
| | | | | | | | | Description: Added tutorial examples that Barbara made following the C tutorial examples. They will be configured for daily test. Platforms tested: Linux/32 2.6 (jam) - tested by running a script that compiled them with h5c++ and executing the examples; output are checked manually
* [svn-r24172] Position trunk/1.8 vars in similar location for comparison.Allen Byrne2013-09-191-3/+3
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* [svn-r24171] Purpose: Fix problem with gcc 4.8Neil Fortner2013-09-196-127/+128
| | | | | | | | | | | | | | Description: With optimization enabled, gcc 4.8 inserts garbage into the padding bytes of floating point types when assigning from a literal constant. This caused problems when H5detect.c scanned the bits in floating point types to determine their properties. Modified H5detect.c to scan for padding before further analyzing the type, and to ignore all information in the padding areas. Also removed code that temporarily disabled optimization. Tested: jam, koala, ostrich, platypus (h5committest)
* [svn-r24167] HDFFV-8513, HDFFV-8522 Plugin testing in h5repack, h5dump.Allen Byrne2013-09-1914-87/+130
| | | | | | | Add more usage info for UserMacros. Add new option information about the Plugin default path. Tested: local linux, jam
* [svn-r24163] Purpose: More on HDFFV-7520 and HDFFV-533Binh-Minh Ribler2013-09-1917-375/+905
| | | | | | | | | | | | Description: - Improved the changes in revisions r22836 and r23438, mainly on the wrappers of reference, dereference, get region, and set/getcomment. - Added more tests. Platforms tested: Linux/32 2.6 (jam) SunOS 5.11 (emu) Linux/ppc64 (ostrich)
* [svn-r24162] backing out a commit that includes wrong filesBinh-Minh Ribler2013-09-1917-907/+375
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* [svn-r24161] Purpose: More on HDFFV-7520 and HDFFV-533Binh-Minh Ribler2013-09-1917-375/+907
| | | | | | | | | | | Description: - Completed the changes in revisions r22836 and r23438 with improvement on wrappers such as reference, dereference, get region, and set/getcomment. - Added more tests. Platforms tested: Linux/32 2.6 (jam) SunOS 5.11 (emu) Linux/ppc64 (ostrich)
* [svn-r24157] Add back STGZ packaging - .sh compressed packageAllen Byrne2013-09-181-0/+1
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* [svn-r24143] Description:Binh-Minh Ribler2013-09-1626-32/+90
| | | | | | | Fixed comments, documentation, and mis-matched DOXYGEN_SHOULD_SKIP_THIS pairs. Platforms tested: Linux/32 2.6 (jam) Regenerated and verified generated documentation.
* [svn-r24142] Purpose: Fix bug in testsBinh-Minh Ribler2013-09-152-4/+10
| | | | | | | | | | | | | | Description: - Passing the c_str() of an std string into a C function caused failure on OpenVMS. Added a work around using temporary string. (th5s.cpp) - Passing incorrect file access property list caused test_datasize() to fail. Fixed. - Close a group in test_dset, before the file can be properly closed. This should fix the problem on OpenVMS. Platforms tested: Linux/32 2.6 (jam) SunOS 5.11 (emu) Linux/ppc64 (ostrich)
* [svn-r24140] Purpose: Remove problematic abandonment of error stackNeil Fortner2013-09-133-36/+41
| | | | | | | | | | | | | | | Description: H5Fis_hdf5 uses H5F_locate_signature to check if the file is hdf5. If it does not locate the signature, H5F_locate_signature would issue an error and return HADDR_UNDEF. H5Fis_hdf5 does not consider it an error if the signature is not found, so it does not issue an error or clear the stack. The filled stack could then cause issues later on. Changed H5F_locate_signature to return herr_t, not issue an error if the signature is not found, and added a parameter for a pointer to the signature address that the function fills in. Tested: jam, koala, ostrich (h5committest)
* [svn-r24139] Remove "will never be exectued" warnings in H5detect.cNeil Fortner2013-09-131-42/+74
| | | | Tested: jam, koala, ostrich (h5committest)
* [svn-r24138] Cast constants to specified type. Allen Byrne2013-09-136-23/+24
| | | | | | | | Cast smaller vars to larger type. Cast calculation result to correct type. Changed int member to hbool_t Tested: local linux
* [svn-r24137] Cast constants to specified type. Allen Byrne2013-09-131-35/+35
| | | | | | | Cast smaller vars to larger type. Cast calculation result to correct type. Tested: local linux
* [svn-r24136] Add base set of warnings for gccAllen Byrne2013-09-131-0/+1
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* [svn-r24128] Change option name for WDTPAllen Byrne2013-09-122-7/+7
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* [svn-r24127] Comment out bundle packingAllen Byrne2013-09-121-1/+1
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* [svn-r24126] Correct mac pinifo.list varsAllen Byrne2013-09-122-37/+35
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* [svn-r24124] HDFFV-8345: Changed usage txt to use dsetN instead ofletters ↵Allen Byrne2013-09-112-79/+42
| | | | | | for objects in examples. Tested: local linux
* [svn-r24120] HDFFV-8345: plugin test properly checks static-exec result to ↵Allen Byrne2013-09-107-77/+37
| | | | | | include test. Tested: jam
* [svn-r24119] Add new tests to memcheck ignore listAllen Byrne2013-09-101-0/+2
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