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* Updated H5O_layout_t dynamic work to use the H5FL interface.Dana Robinson2017-06-077-28/+79
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* Made some H5O_layout_t stack allocations dynamic (quiets warnings).Dana Robinson2017-06-066-53/+86
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* Merge pull request #559 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-06-025-231/+143
|\ | | | | | | | | | | | | * commit '3525de8fede588e143fcff837ebd1c7b0ad59252': Add toolset option Synchronize cmake files Added toolset and intel checks
| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2017-06-0226-88/+98
| |\ | |/ |/| | | | | | | | | * commit '5cb9c40847d1706ce82a2b2cda4c6c5596b10994': Fixed typo in vfd.c from 'updated VFD feature flag' checkin. Rework of the POSIX file open permissions and macros to clean up HDopen() calls. Changed the Windows POSIX open() file permissions to be correct according to MSDN. Partial fix for HDFFV-9630.
* | Merge pull request #483 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:windows_open ↵Dana Robinson2017-05-3125-87/+97
|\ \ | | | | | | | | | | | | | | | | | | | | | to develop * commit '1e9354bcf551c16f3ad9d6a4ad42a2bce827c95e': Rework of the POSIX file open permissions and macros to clean up HDopen() calls. Changed the Windows POSIX open() file permissions to be correct according to MSDN. Partial fix for HDFFV-9630.
| * \ Merge branch 'develop' into windows_openDana Robinson2017-05-31144-5273/+6793
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* | | Merge pull request #553 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop to developDana Robinson2017-05-301-1/+1
|\ \ \ | | | | | | | | | | | | | | | | * commit '5efda2babf7f4bd7424d147e20b72b0f227f1704': Fixed typo in vfd.c from 'updated VFD feature flag' checkin.
| * | | Fixed typo in vfd.c from 'updated VFD feature flag' checkin.Dana Robinson2017-05-301-1/+1
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| * | Rework of the POSIX file open permissions and macros to clean upDana Robinson2017-04-2825-96/+86
| | | | | | | | | | | | | | | | | | HDopen() calls. Also fixed a minor const warning in the core VFD.
| * | Changed the Windows POSIX open() file permissions to be correctDana Robinson2017-04-2818-41/+60
| | | | | | | | | | | | according to MSDN. Partial fix for HDFFV-9630.
| | * Add toolset optionAllen Byrne2017-06-023-4/+5
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| | * Synchronize cmake filesAllen Byrne2017-05-302-218/+113
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| | * Added toolset and intel checksAllen Byrne2017-05-303-16/+32
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* | Merge pull request #548 in HDFFV/hdf5 from ↵Dana Robinson2017-05-2714-64/+292
|\ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:compat_feature_flag to develop * commit '13d3d4bd0e0b799aa9c3a9b45e445d1f52294d47': Added feature flag checks for a few other VFDs in test/vfd.c. * Added new public H5FDdriver_query() API call. * Changed return type of H5FD_driver_query() to herr_t. * Updated swmr.c to use H5FDdriver_query() instead of the private call. * Added some flags tests to vfd.c. * Made H5FD_driver_query() a private function instead of static. * Moved H5FD_driver_query() to H5FDint.c. * Minor typo fixes in H5I.c. * Updated swmr.c to check the VFD feature flags and skip the retries test when the VFD is not compatible with H5P_DEFAULT. Initialized IDs to -1 and minor code tidy. Fixed HDFFV-10214: * Updated comments in the library to accurately reflect the semantics of the H5FD_FEAT_POSIX_COMPAT_HANDLE flag. * Removed the check for the POSIX compatible handle feature flag when determining if a VFD supports SWMR. Partial work for HDFFV-10197: * Added a new H5FD_FEAT_DEFAULT_VFD_COMPATIBLE feature flag that is set when a VFD creates output that is compatible with the default VFD. Will be used in the testing but might also be generally useful to users.
| * | Added feature flag checks for a few other VFDs in test/vfd.c.Dana Robinson2017-05-261-10/+116
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| * | Merge branch 'develop' into compat_feature_flagDana Robinson2017-05-2640-895/+415
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* | | Merge pull request #547 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:gcc_flag_cull ↵Dana Robinson2017-05-262-3/+3
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | to develop * commit 'b6de142cf4a863787dceaa333684615fc190d6d5': Chagned gfortran40 to gfortran in a few config files.
| * | | Chagned gfortran40 to gfortran in a few config files.Dana Robinson2017-05-262-3/+3
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* | | | Merge pull request #545 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-261-2/+22
|\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'c059e6ecf7bafc6b5c1c9b8a39e8515e23f52303': Spelling Enhanced the release note using 'Writing Notes in a RELEASE.txt File' Note HDFFV-8611 change
| * | | | SpellingAllen Byrne2017-05-261-1/+1
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| * | | | Enhanced the release note using 'Writing Notes in a RELEASE.txt File' Allen Byrne2017-05-261-5/+20
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| * | | | Note HDFFV-8611 changeAllen Byrne2017-05-261-0/+5
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* | | | | Merge pull request #546 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:gcc_flag_cull ↵Dana Robinson2017-05-261-1/+1
|\ \ \ \ \ | |/ / / / |/| / / / | |/ / / | | | | | | | | | | | | to develop * commit '742e1d5541a488ca1a1772c05833c16a6a73d3ab': Fixed misplaced space in config/gnu-flags.
| * | | Fixed misplaced space in config/gnu-flags.Dana Robinson2017-05-261-1/+1
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* | | Merge pull request #538 in HDFFV/hdf5 from ↵Dana Robinson2017-05-2627-265/+278
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:may_dev_warnings to develop * commit '57f0a296c0b727e3d86cea312ba46efc98d76227': Minor warning fix. More minor warning fixes. Minor warning fixes in the tools. Minor type fixes to h5watch. A few more warnings fixed. Fixed additional minor warnings. Fixed many minor warnings.
| * | | Minor warning fix.Dana Robinson2017-05-251-1/+0
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| * | | More minor warning fixes.Dana Robinson2017-05-253-2/+4
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| * | | Minor warning fixes in the tools.Dana Robinson2017-05-252-4/+5
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| * | | Minor type fixes to h5watch.Dana Robinson2017-05-252-19/+19
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| * | | A few more warnings fixed.Dana Robinson2017-05-251-3/+3
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| * | | Fixed additional minor warnings.Dana Robinson2017-05-255-25/+25
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| * | | Fixed many minor warnings.Dana Robinson2017-05-2516-214/+225
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* | | | Merge pull request #540 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:gcc_flag_cull ↵Dana Robinson2017-05-261-607/+88
|\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop * commit '35aec6ab2ca6018a6f5babc943d29957d6595f67': Updated the gnu-flags config file to remove gcc 3.x and 4.0 configurations as well as other minor rework and cleanup.
| * \ \ \ Merge branch 'develop' into gcc_flag_cullDana Robinson2017-05-2551-539/+744
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| * | | | | Updated the gnu-flags config file to remove gcc 3.x and 4.0 configurationsDana Robinson2017-05-161-607/+88
| | | | | | | | | | | | | | | | | | | | | | | | as well as other minor rework and cleanup.
* | | | | | Merge pull request #541 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-265-9/+10
|\ \ \ \ \ \ | |_|/ / / / |/| | | | | | | | | | | | | | | | | * commit 'db2da9f4b4b582d644d4b2e976040fce4dd1d665': Reduce warnings
| * | | | | Reduce warningsAllen Byrne2017-05-255-9/+10
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* | | | | Merge pull request #534 in HDFFV/hdf5 from ↵Frank Willmore2017-05-251-0/+5
|\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~FRANK.WILLMORE/hdf5:fix-set-mpi-err-handler to develop * commit '1ee90786196c10c2c616a9fb4b8b1f92ebefa1f2': updated MPI error handling call for MPICH2 standard cleanup enabled MPI error handling added test file
| * | | | | updated MPI error handling call for MPICH2 standardFrank Willmore2017-05-241-1/+1
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| * | | | | cleanupFrank Willmore2017-05-231-0/+0
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| * | | | | enabled MPI error handlingFrank Willmore2017-05-231-0/+5
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| * | | | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Frank Willmore2016-12-191063-21355/+45066
| |\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'ab3963b28e59419f8e857ec224dd4efa3ea6dd8e': (214 commits) Merge SWMR-related testing to existing tests. Bring over tweak for missing environment variable. Update CMake configuration files with SWMR accumulator changes. Add missing accumulator test. Merge SWMR-oriented accumulator tests from revise_chunks to develop. Bring Java SWMR changes from revise_chunks to develop branch Snapshot version 1.9 release 235 Change dlopen from RTLD_NOW to RTLD_LAZY Fix bad implementation of Windows nanosleep equivalent. Removed NDEBUG guards from H5AC test functions. Bring SWMR-related tools changes from revise_chunks to develop. Bring over changes from revise_chunks that cleanup recent SWMR changes from code review feedback. Updated the H5FS cache code to grab the correct tag and modified the freespace test to use dxpls that have been tagged with the H5AC__FREESPACE_TAG global tag instead of H5AC_ind_read_dxpl_id. The library code now expects the owner of the free space manager to tag it so the owner-less free space managers in the freespace tag had to be tagged with *something* to avoid cache errors. Updated the comment for the valgrind fix. Fixed a valgrind problem in file shutdown exposed by the swmr.c test. Reduce timeout as normal run time on windows is less then 10 min Updated the icc flags (C flags only). Another Java oversight (sorry, don't have Java configured on my Mac) Correct oversight in Java test and remove direct VFD from SWMR supported drivers. Bring SWMR support in to the main development branch. (Finally!) More tests and the tool and API wrappers will be coming in over the weekend. ...
| * | | | | | added test fileFrank.Willmore2016-09-301-0/+0
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* | | | | | | Merge pull request #535 in HDFFV/hdf5 from ↵Dana Robinson2017-05-243-9/+9
|\ \ \ \ \ \ \ | |_|_|_|/ / / |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:h5i_object_verify to develop * commit '8807f918b9b00916efa822dda0301d3aa9debd80': Added missing casts for the return value of H5I_object_verify().
| * | | | | | Added missing casts for the return value of H5I_object_verify().Dana Robinson2017-05-243-9/+9
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| | | | * | * Added new public H5FDdriver_query() API call.Dana Robinson2017-05-246-11/+97
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * Changed return type of H5FD_driver_query() to herr_t. * Updated swmr.c to use H5FDdriver_query() instead of the private call. * Added some flags tests to vfd.c.
| | | | * | * Made H5FD_driver_query() a private function instead of static.Dana Robinson2017-05-245-45/+70
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * Moved H5FD_driver_query() to H5FDint.c. * Minor typo fixes in H5I.c. * Updated swmr.c to check the VFD feature flags and skip the retries test when the VFD is not compatible with H5P_DEFAULT.
| | | | * | Initialized IDs to -1 and minor code tidy.Dana Robinson2017-05-241-6/+6
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| | | | * | Merge branch 'develop' into compat_feature_flagDana Robinson2017-05-2420-92/+225
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* | | | | | Merge pull request #531 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-2315-77/+198
|\ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '416ad00182e2d0fccc09d60a6da95aef8ad94d0e': HDFFV-8611 add autotools test Remove obsolete function HDFFV-8611 change h5repack to save the root group creation order Added test and new arguments to control the the input file parsing.
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