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* [svn-r20274] Purpose:Jonathan Kim2011-03-182-7/+8
| | | | | | | | | | | | | | Fixed Bug 2214 - GMQS: h5diff - memory leak in diff() Description: Memory leaks occurred when accessing symbolic links with --follow-symlink option. Test cases are in testing script. (400 - 456, 501 - 518) An example test : valgrind --leak-check=full h5diff --follow-symlinks -v h5diff_softlinks.h5 h5diff_softlinks.h5 Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Cmake - jam
* [svn-r20270] Purpose:Jonathan Kim2011-03-187-21/+60
| | | | | | | | | | | | | | | | Improve the previous fix for Bug 2216 - GMQS: h5diff - memory leak when compares vlen string in dataset or attributes Description: Improve the fix along with the previous checkin r20266. Add a new function to tool lib, h5tools_detect_vlen_data() which return TRUE if include any kind of vlen data all at once, either VLEN-data or VLEN-string and so on. Also updated h5ls and h5dump code accordingly. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Cmake - jam
* [svn-r20267] Corrected expected fail tests for use during valgrindAllen Byrne2011-03-181-25/+6
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* [svn-r20266] Purpose:Jonathan Kim2011-03-172-46/+67
| | | | | | | | | | | | | | Fixed Bug 2216 - GMQS: h5diff - memory leak when compares vlen string in dataset or attributes Description: Test for dataset : valgrind --leak-check=full ./h5diff -v h5diff_dset1.h5 h5diff_dset2.h5 /g1/VLstring Test for attr : valgrind --leak-check=full ./h5diff h5diff_attr1.h5 h5diff_attr2.h5 Both test cases are in testing script. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Cmake - jam
* [svn-r20265] Cleanup due to project file syncing with 1.8 branchAllen Byrne2011-03-175-50/+10
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* [svn-r20262] In my previous checkin (20255), I used H5Gcreate instead of ↵Raymond Lu2011-03-161-1/+1
| | | | | | | | H5Gcreate2 in my test. I just corrected it . Tested on jam.
* [svn-r20260] Windows compilers insist that variable declarations are before ↵Allen Byrne2011-03-161-5/+5
| | | | assignement statements
* [svn-r20257] Corect name of test in test propertyAllen Byrne2011-03-161-1/+1
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* [svn-r20255] Bug 2115 - add H5_VERSION_GE and H5_VERSION_LE macros. I added ↵Raymond Lu2011-03-151-1/+68
| | | | | | a new test case to show how to use them. Tested on jam and amani.
* [svn-r20254] Description:Jonathan Kim2011-03-153-6/+6
| | | | | | | | | h5ls is used to verify for the result, so change the two tests not to run h5diff like others. This is related to the previous checkin SVN r18398 for Bug#1733. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), cmake (jam)
* [svn-r20252] Add comment that indicates a "2" in the resultcode param means ↵Allen Byrne2011-03-151-0/+1
| | | | "skip h5diff" component of test
* [svn-r20251] Correct expected fail tests to check a result code of NOT 0Allen Byrne2011-03-151-2/+2
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* [svn-r20250] Enable memcheck of h5stat and h5diff toolsAllen Byrne2011-03-151-147/+0
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* [svn-r20249] Add test properties to H5LS for expected failAllen Byrne2011-03-153-27/+45
| | | | Add SKIPPED to test name if test skipped, also do not run skipped tests if doing memcheck
* [svn-r20247] Change name of new VLEN function from H5Tdetect_vlen_str to ↵Allen Byrne2011-03-144-10/+20
| | | | | | | | h5tools_detect_vlen_str to match other functions in tools lib. Added back test for H5Tdetect_class of H5T_VLEN after each instance of above function to catch all VLEN types in h5dump. Tested: local linux
* [svn-r20243] Update CMake version to 2.8.4Allen Byrne2011-03-141-1/+1
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* [svn-r20241] Corrected an error in the comments for H5Oget_comment(_by_name) ↵Raymond Lu2011-03-142-3/+3
| | | | | | | | and H5G_loc_get_comment_cb: the return value is the size of the comment excluding NULL terminator. No test is needed.
* [svn-r20239] Add HDFGroup to PACKAGE_NAME, as parent folder name for CPack ↵Allen Byrne2011-03-141-1/+1
| | | | installation configuration.
* [svn-r20231] Purpose:Jonathan Kim2011-03-117-6/+32
| | | | | | | | | | Fixed Bug 1904 - h5ls : usage of '-a' option is not clear to display expected output Description: Fixed incorrect content and improved help page for -a option of h5ls. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), Cmake (jam)
* [svn-r20228] Add tools bin folder to installation variablesAllen Byrne2011-03-101-0/+1
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* [svn-r20226] Entered known problem of --with-mpe does not work with mpich2.Albert Cheng2011-03-101-0/+2
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* [svn-r20224] Add enable-error-stack option to new features-tools section.Allen Byrne2011-03-102-258/+17
| | | | Enable h5stat tests for valgrind testing.
* [svn-r20223] Adding notes for fixing h5dump bug on -y -o options.Peter Cao2011-03-101-0/+3
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* [svn-r20222] Correct mistake by declaring indexing variable removed from for ↵Allen Byrne2011-03-101-0/+1
| | | | at top of function.
* [svn-r20221] Remove rougue 'int' inside for loop (cut-paste error) - windows ↵Allen Byrne2011-03-101-1/+1
| | | | complained.
* [svn-r20219] Description:Quincey Koziol2011-03-103-7/+7
| | | | | | | | | | | | | | | | | Tell the VFL flush call that the file will be closing, allowing the VFDs to avoid sync'ing the file (particularly valuable in parallel). Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, w/threadsafe, in production mode Linux/PPC 2.6 (heiwa) w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in debug mode
* [svn-r20218] Valgrind fix for memory leak in print_datatype which used an ↵Allen Byrne2011-03-091-1/+3
| | | | | | allocation function in a printf(). Tested: local linux and valgrind
* [svn-r20217] Valgrind indicated error in reading past end of buffer.Allen Byrne2011-03-091-1/+4
| | | | Tested: local linux and valgrind
* [svn-r20216] Valgrind fix for memory leak in h5tools_dump_xxx which is fixed ↵Allen Byrne2011-03-094-4/+90
| | | | | | | | by adding a new function; htri_t H5Tdetect_vlen_str(hid_t tid) to h5tools. This needs to be called before any H5Aread/H5Dread and if TRUE, then call vlen_reclaim function after the corresponding h5tools_dump_xxx(). Tested: local linux and valgrind
* [svn-r20211] Valgrind indicated error in writing past buffer. Contary to ref ↵Allen Byrne2011-03-091-1/+1
| | | | | | man H5O_get_comment does not return null char in size. Tested: local linux and valgrind
* [svn-r20209] add test case for -y -o for h5dumpPeter Cao2011-03-091-0/+6
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* [svn-r20208] Valgrind fix for memory leak in free_tables - 2nd malloc was ↵Allen Byrne2011-03-091-0/+4
| | | | | | freed by free_table calls but not the first malloc. Added HDfree('table') after each free_table() call. Tested: local linux and valgrind
* [svn-r20207] removed duplicate line.Peter Cao2011-03-091-1/+0
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* [svn-r20206] Updated manifest and source code for fixing h5dump -y -o problemPeter Cao2011-03-093-9/+13
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* [svn-r20205] Add tall-6.ddl from previous commit r20204.Jonathan Kim2011-03-081-0/+1
| | | | Test file for Bug 2183 - h5dump -y -o prints out attribute values
* [svn-r20204] Add test case for check -y -o optionsPeter Cao2011-03-081-0/+27
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* [svn-r20203] Purpose:Jonathan Kim2011-03-085-9/+60
| | | | | | | | | | | | | Fix Bug 2120 - h5copy: improve to copy an object into same HDF file Description: Before the fix users can't copy an object (dataset or group) with different name if input file (-i) and output file (-o) is same. This feature would be useful to clone any object with different name and reuse contents. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Cmake (jam)
* [svn-r20202] Correct order of tests DEPENDSAllen Byrne2011-03-081-7/+3
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* [svn-r20201] Order fflush tests - fflush2 DEPENDS on fflush1Allen Byrne2011-03-081-0/+1
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* [svn-r20200] Add expected fail condition to memcheck alternate tests.Allen Byrne2011-03-082-0/+18
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* [svn-r20197] Change test macro to allow control of infile and outfile parametersAllen Byrne2011-03-081-4/+8
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* [svn-r20195] Description: Fixed memory leaks (valgrind detected) in ↵Scot Breitenfeld2011-03-072-5/+9
| | | | | | field_info and make tables routines. Tested: jam (gnu and intel compilers)
* [svn-r20192] Description: Bug 1939: h5tbget_field_info_fScot Breitenfeld2011-03-064-1173/+1203
| | | | | | | | | | | | | | | | | * Fixed error in passing an array of characters with different length field names for h5tbmake_table. * Fixed error in h5tget_field_info_f with packing the C strings into a fortran array of strings. * Added optional arguement to h5tbget_field_info_f called maxlen which returns the maximum string character length in a field name element. * Uncommented out test for h5tbget_field_info_f in the test program and added additional checks for the output. Tested: jam (intel and gnu compilers)
* [svn-r20188] Purpose:Jonathan Kim2011-03-042-2/+18
| | | | | | | | | | | | Fixing Bug 2161 - GMQS: h5dump - only on Windows, skip displaying a data value every a certain lines in array type dataset Description: Fixed h5dump for skipping some values for long array type dataset on Windows. This issue only occurred on Windows due to the different return behavior from _vsnprintf() funtion. Tested: Windows, jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE)
* [svn-r20186] Verify/cleanup code due to debugging changesAllen Byrne2011-03-043-9/+10
| | | | Tested: local linux
* [svn-r20184] Enable h5dump tests in valgrindAllen Byrne2011-03-042-195/+223
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* [svn-r20180] I added 2 public macros to the H5public.h - H5_VERSION_GE and ↵Raymond Lu2011-03-022-0/+60
| | | | | | H5_VERSION_LE - and put some test cases in tfile.c. Tested on jam, heiwa, and amani.
* [svn-r20172] Add h5mkgrp utility to package listAllen Byrne2011-03-011-1/+1
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* [svn-r20171] Add HDF5_USING_MEMCHECKER guards around script mode ADD_TEST. ↵Allen Byrne2011-03-019-222/+253
| | | | | | This will replace the list of ignore tests in CTestCustom.cmake file. Tested: local linux
* [svn-r20170] Correct name of tool from hdf2gif to h52gif.Allen Byrne2011-03-011-4/+4
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