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* [svn-r13660] Minor cleanups and bug fixes.Elena Pourmal2007-04-134-6/+8
| | | | | | | | | H5Zpublic.h file didn't include H5public.h; done H5Spublic.h had ghost function H5Sset_space; deleted New source files were added to make.com for VMS. h5gget_comment_c had a small bug in calculating buffer length; fixed Platforms tested: pahra and kagiso; too minor for h5committest
* [svn-r13657] Pedro Vicente Nunes2007-04-131-1/+4
| | | | add note for gif tools
* [svn-r13656] Pedro Vicente Nunes2007-04-131-9/+0
| | | | | | remove an unnecessary file name size limit tested: linux
* [svn-r13654] Peter Cao2007-04-131-0/+5
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* [svn-r13650] Description:Quincey Koziol2007-04-124-17/+13
| | | | | | | | Clean up problems from error handling API changes in parallel and threadsafe builds. Tested on: FreeBSD/64 6.2 (liberty) w/parallel & threadsafe
* [svn-r13649] Updated Windows project files hdf5.dsp and hdf5dll.dsp to ↵Scott Wegner2007-04-122-12/+170
| | | | | | | include new source files. Tested: VS6 on WinXP
* [svn-r13648] Description:Quincey Koziol2007-04-1235-1845/+2039
| | | | | | | | | | Rename new error handling API routines from H5E<foo>_stack() to H5E<foo>2(). Tested on: Mac OS X/32 10.4.9 (amazon) FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty)
* [svn-r13647] Purpose:Albert Cheng2007-04-111-2/+9
| | | | | | | | | | | | bug fix. Description: If a non-existing or empty source file is used with -c option, the script ended up doing nothing and exit 0--a false success. Changed code so that it would do compile and end in error. Tested: Kagiso.
* [svn-r13646] Fortran/examples/testh5fc.sh.in:Albert Cheng2007-04-113-42/+28
| | | | | | | | | | | | | Most fortran compilers do not support the Preprocessing -E option. Removed the tests for preprocessing only. examples/testh5cc.sh.in: c++/examples/testh5c++.sh.in: Updated comments and some cosmetic rearrangement. No substance changes. Tested platform: Copper, kagiso.
* [svn-r13645] Purpouse:Albert Cheng2007-04-111-4/+8
| | | | | | | | | | | | | | | | Bug fix (851) Description: h5vers calls bin/reconfigure which may fail but h5vers does not check its return value. This will result in discrepency between files such as configure and configure.in. Solution: Fixed it by checking exit code of bin/reconfigure and return error if it fails. Tested: osage and kagiso.
* [svn-r13643] Pedro Vicente Nunes2007-04-111-8/+7
| | | | | | avoid hsize_t array index use tested: linux
* [svn-r13639] Description:Quincey Koziol2007-04-111-7/+10
| | | | | | | Accomodate changes in error stack for recent library code changes. Tested on: Linux/64 2.6 (chicago2) w/threadsafe
* [svn-r13638] Pedro Vicente Nunes2007-04-111-2/+31
| | | | | | | bug fix memory leaks tested: linux
* [svn-r13636] Description:Quincey Koziol2007-04-1140-1074/+1845
| | | | | | | | | | | | | | Change H5[D|G|T]<foo>_expand() "temporary" API routines to H5[D|G|T]<foo>2() "versioned" routines. Also added H5[D|G|T](create|commit)_anon() routines to continue to allow "anonymous" objects to be created in a file. Tested on: Mac OS X/32 10.4.9 (amazon) FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r13635] Description:Quincey Koziol2007-04-116-14/+17
| | | | | | | Clean up code and reduce compiler warnings... Tested on: Mac OS X/32 10.4.9 (amazon)
* [svn-r13634] Description:Quincey Koziol2007-04-111-12/+2
| | | | | | | | Remove a "//" comment from John's recent changes and clean up a few warnings. Tested on: Mac OS X/32 10.4.9 (amazon)
* [svn-r13633] PurposeAlbert Cheng2007-04-1112-7/+768
| | | | | | | | | | New feature Description: Added test scripts to test the compiler scripts (h5cc, h5fc and h5c++) Tested platform: Kagiso (serial and pp)
* [svn-r13628] Pedro Vicente Nunes2007-04-101-7/+5
| | | | | | test for a NULL pointer in free tested: linux
* [svn-r13626] Pedro Vicente Nunes2007-04-101-116/+24
| | | | | | eliminate code that was meant to have input for multiple images, that is not working tested: linux , solaris
* [svn-r13624] Pedro Vicente Nunes2007-04-102-14/+6
| | | | | | | bug fix eliminate a 64 limit size of an input file tested : linux
* [svn-r13622] Pedro Vicente Nunes2007-04-102-1/+4
| | | | make makefile to clean temporary files
* [svn-r13620] Old source file readhdf.c removed from Windows project files ↵Scott Wegner2007-04-092-16/+10
| | | | | | | h52gif and h52gifdll. Tested: VS6 and VS2005 on WinXP
* [svn-r13618] Modified metadata cache to support multiple read only protects of John Mainzer2007-04-097-226/+1579
| | | | | | | | | | cache entries. Added test code to test the new feature. Also some minor cleanum h5committested -- passed on copper and sol. Failed on osage with a configuration error that appears unrelated to my changes. Serial test (debug mode) passes on Phoenix (Linux x86 2.6 kernel), so I went ahead with the checkin.
* [svn-r13616] This check-in updates the bin/reconfigure file to point to the ↵Mike McGreevy2007-04-0945-15824/+8952
| | | | | | | | most recent versions of the autotools. Updated autotool versions are: autoconf 2.61, automake 1.10.0, and libtool 1.5.22. Tested on kagiso.
* [svn-r13615] Pedro Vicente Nunes2007-04-0912-1172/+936
| | | | | | | | | | | bug fixes substituted hize_t array index variables for int stack corruption in the h52gif reading routine, wrote a new routine shell script for gif tests, added check of program return value enabled the gif test script tested: linux pgcc, solaris, linux 64
* [svn-r13611] Removed old source file h5_trav_table.c from Windows project ↵Scott Wegner2007-04-082-30/+0
| | | | | | | files toolslib and toolslibD.dsp Tested: VS6.0 on Windows XP
* [svn-r13605] Add big file test for SEC2.Raymond Lu2007-04-061-0/+19
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* [svn-r13596] Update document and comments. No test needed.Raymond Lu2007-04-052-1/+7
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* [svn-r13595] Add the macro check of H5_HAVE_FSEEKO for STDIO test. Without itRaymond Lu2007-04-051-1/+2
| | | | | | there'll be no big file support. Tested on smirom because it's a simple change.
* [svn-r13594] Change a comment line. No test needed.Raymond Lu2007-04-051-1/+1
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* [svn-r13591] Problem:Albert Cheng2007-04-051-1/+2
| | | | | | | | | | | 4294967296LL is not supported by older C like Windows VC6. Solution: /* use <= 2**32 -1 to stay within 4 bytes integer range */ HDassert(chunk0_size <= 4294967295UL); Platforms tested: kelgia, copper and osage.
* [svn-r13590] Take out the unused header file errno.h.Raymond Lu2007-04-041-1/+0
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* [svn-r13589] Pedro Vicente Nunes2007-04-0417-280/+261
| | | | | | h5repack code cleaning (required reconfigure) tested: linux (32, 64, parallel), solaris
* [svn-r13588] A support of files bigger than 2GB for STDIO driver. Configure ↵Raymond Lu2007-04-0411-60/+181
| | | | | | | | will check if fseeko is available. Using it instead of fseek can support big files because the offset is of type off_t not long int. Also added the test for STDIO in big.c.
* [svn-r13582] Pedro Vicente Nunes2007-04-033-16/+13
| | | | | | | | Bug fix Substitute a malloc call for a calloc call while allocating a reference buffer Add a test for an empty reference case Tested linux
* [svn-r13580] Description:Quincey Koziol2007-04-0324-353/+389
| | | | | | | | | | | | Add version # and flags to external link format (as fields in a single byte), in order to accomodate future changes/expansions. Tested on: Mac OS X/32 10.4.9 (amazon) Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2) FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty)
* [svn-r13578] Pedro Vicente Nunes2007-04-031-1/+1
| | | | | | Cast a malloc call to the correct type Tested linux
* [svn-r13576] Pedro Vicente Nunes2007-04-031-1/+1
| | | | | | | | bug fix a call was made to printf instead of parallel_print tested linux parallel
* [svn-r13575] Problem:Elena Pourmal2007-04-031-1/+1
| | | | | | | | | | | dsets failed on kelgia with assertion failure in H5Ocache.c. Kelgia could not deal with the comparison of uint64_t variable with 4294967296 constant. Solution: By John's suggestions used suffix LL for the constant. Platforms tested: kelgia, kagiso, and smirom with icc compiler
* [svn-r13574] Pedro Vicente Nunes2007-04-024-10/+44
| | | | | bug fix check if a palette is to be linked and correct wrong calls in some functions with missing arguments
* [svn-r13573] Pedro Vicente Nunes2007-04-029-22/+118
| | | | | | | | | | | | Bug fixes Reset external file list slots name_offset to a state when created (0) in H5P_dcrt_copy so that it conforms to an assertion in H5D_update_entry_info that assumes the name_offset is 0 at this point this fixes the problem of h5repack and external files, add a new test and files for an external file h5diff, check for an error return in H5D_get_storage_size tested linux 32, 64
* [svn-r13570] Description:Quincey Koziol2007-03-303-1/+194
| | | | | | | | Fix error when eliminating empty chunk from "middle" of list of chunks for an object header. Tested on: Mac OS X/32 10.4.9 (amazon)
* [svn-r13561] Daily tests failed on kagiso and smirom when Intel comopiler is ↵Elena Pourmal2007-03-291-6/+6
| | | | | | | | | | | | used with "-check all" flag Solution: Initialized variables to prevent run time error Platforms tested: smirom and kagiso with Intel kagiso with PGI
* [svn-r13560] Pedro Vicente Nunes2007-03-283-18/+22
| | | | | | | | bug fix a malloc call with an incorrect length caused several memory problems that ultimately corrupted a name passed in a list of arguments in the h52gif tool allocated memory was not freed tested linux
* [svn-r13556] Pedro Vicente Nunes2007-03-275-126/+126
| | | | | | Code cleaning regarding formatting and indentation Tested linux
* [svn-r13554] Pedro Vicente Nunes2007-03-271-0/+4
| | | | update new files
* [svn-r13553] Pedro Vicente Nunes2007-03-273-2/+154
| | | | | | | | | | | New feature Add a tests script for h52gif tool. A simple script that just runs the tool from a pre-saved HDF5 file and produces a gif file. A HDF5 test generator program is also added Note: the .am file needs further development, right now it is not producing the test
* [svn-r13549] Description:Quincey Koziol2007-03-2715-203/+211
| | | | | | | | | Check in changes from Elena and I to get pgcc compiler working again. Primarily (all?) changes to move from using 'hsize_t' as array index to using something else ('size_t') mostly. Tested on: Linux/32 2.4 kagiso w/pgcc
* [svn-r13548] Tests that write/read on randomly selected chunks to check for ↵Christian Chilan2007-03-271-1/+236
| | | | potential problem in b-tree code. Tests passed on smirom, cobalt, and copper.
* [svn-r13546] Pedro Vicente Nunes2007-03-261-12/+16
| | | | | | | | Bug fix The H5TB_find_field function was not correctly finding a string field name amongst a string list of parameters of field names in cases where the name is similar up to n characters. Solution: added an extra verify condition with the string length Tested: kagiso, simple fix
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