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* Fix h5repack for variable-length datatyped datasets (#3331) (#3333)jhendersonHDF2023-08-022-2/+27
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* Fix H5Otoken_to_str call in h5dump and other minor cleanup (#3314) (#3329)jhendersonHDF2023-08-024-36/+72
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* Fix incorrect error check in H5Ofill.c for undefined fill values (#3312) (#3328)jhendersonHDF2023-08-023-4/+41
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* Switch parallel compression to use vector I/O (#3245) (#3327)jhendersonHDF2023-08-022-816/+544
| | | | Updates parallel compression feature to use vector I/O instead of creating and passing down MPI derived types to VFD
* Fix loading plugin fails with missing directory GH issue #3248 (#3323)Allen Byrne2023-08-023-3/+13
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* Update so numbers according to API changes since version 1.14.1. (#3309)Larry Knox2023-07-291-9/+9
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* Sync of src w/ develop (#3307)Dana Robinson2023-07-28289-14676/+12305
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* Bring clang-format changes from develop (#3305)Dana Robinson2023-07-283-38/+40
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* Brings an enum fix from develop (#3304)Dana Robinson2023-07-284-519/+568
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* Sync test dir w/ develop (#3303)Dana Robinson2023-07-28109-2040/+1982
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* Sync tools with develop (#3301)Dana Robinson2023-07-2884-626/+785
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* Sync testhdf5 files w/ develop (#3300)Dana Robinson2023-07-2821-532/+534
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* Sync ros3 VFD w/ develop (#3299)Dana Robinson2023-07-286-149/+583
| | | | | * Sync ros3 VFD w/ develop Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Convert H5F_addr calls to H5_addr (#3297)Dana Robinson2023-07-27146-1293/+1291
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* Sync high-level library with develop (#3298)Dana Robinson2023-07-2730-840/+835
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* Sync Fortran w/ develop (#3296)Dana Robinson2023-07-2733-210/+203
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* Misc missed things from previous merges (#3295)Dana Robinson2023-07-2787-302/+218
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* Remove "Programmer" lines (#3294)Dana Robinson2023-07-27593-19248/+107
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* Brings over most of the HD prefix removal (#3293)Dana Robinson2023-07-27651-44739/+44374
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* Misc warnings and cross-compile improvements (#3281)Dana Robinson2023-07-2710-74/+80
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* Normalizes the public headers (#3292)Dana Robinson2023-07-2763-525/+509
| | | * Also brings over the apostrophe fix
* Fix assertion failure when attempting to use IOC VFD directly (#3187) (#3288)jhendersonHDF2023-07-274-0/+66
| | | Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
* Fix some warnings in developer builds (#3247) (#3291)jhendersonHDF2023-07-2722-269/+250
| | | | | * Fix some warnings in developer builds * Switch approach to Winline flag
* Subfiling VFD source cleanup (#3241) (#3290)jhendersonHDF2023-07-2737-3293/+173
| | | | | | | | | | | | | | | | | | | | | | | | * Subfiling VFD source cleanup (#3241) * Subfiling VFD source cleanup Modularize Subfiling CMake code into separate CMakeLists.txt file Update Mercury util code to latest version and update Copyright Generate mercury_util_config.h header file instead of using pre-generated file Remove unnecessary Mercury functionality Fix minor warning in Subfiling VFD code * Remove Mercury headers from Autotools publicly-distributed header list * Fix CMake builds when Subfiling VFD isn't enabled (#3250) * Fix CMake builds when Subfiling VFD isn't enabled * Add Subfiling VFD entry to hdf5-config.cmake.in
* API test updates (#3018) (#3287)jhendersonHDF2023-07-2737-3694/+4246
| | | | | | | | | | | | | | | | | | | | | | | | | * Remove macros from api tests (#2929) * Remove macros and undefined callbacks (#2959) * Remove remaining macros from H5_api_tests_disabled.h (#2968) * Put some vol capability checks in testpar tests and remove remaining warnings (#2995) * API tests datatype generation cleanup * Clean up API tests' random datatype generation and fix bug with enum datatype generation * Init parallel API tests with MPI_THREAD_MULTIPLE * HDF5 API tests - Check VOL connector registration * Determine whether a VOL connector failed to load before running API tests * Cleanup some usages of H5VL_CAP_FLAG_CREATION_ORDER in API tests * Remove some now-unused macros from H5_api_tests_disabled.h * Enable HDF5 API tests by default * Implement CMake option to install HDF5 API tests * Check for invalid AAPL from H5Acreate * Enable building of VOL connectors alongside HDF5 in CMake * Prepend CMake VOL URL option indices with 0s so they come in order * Don't turn on API tests by default yet * Document VOL connector FetchContent functionality * Add release note for API test updates * Only install testing library if API tests are installed * Fix grammar
* Normalize C++ w/ develop (#3279)Dana Robinson2023-07-2749-990/+249
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* Fix release version for some H5Pfapl routines (#3023) (#3286)jhendersonHDF2023-07-271-3/+3
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* Normalize java w/ develop (#3283)Dana Robinson2023-07-2724-639/+638
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* Normalize mirror server code (#3289)Dana Robinson2023-07-275-211/+153
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* Add test for HDstrcasestr macro (#2115) (#3285)jhendersonHDF2023-07-273-4/+65
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* Fix warning in cache_common.c (#2952) (#3284)jhendersonHDF2023-07-271-65/+77
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* Normalize examples w/ develop (#3282)Dana Robinson2023-07-2716-31/+22
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* Bump Autoconf to 2.71 (#3280)Dana Robinson2023-07-271-1/+1
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* Brings over some H5F changes (#3278)Dana Robinson2023-07-275-373/+346
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* Sync .github directory (#3277)Dana Robinson2023-07-275-19/+148
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* Remove unused files (#3276)Dana Robinson2023-07-276-559/+0
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* sync bin dir with develop (#3269)Allen Byrne2023-07-2413-39/+26
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* Fix documentation (#3253)Allen Byrne2023-07-206-31/+27
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* Merge changes from develop (#3237)Allen Byrne2023-07-166-399/+131
| | | to support official and snapshot releases from Github.
* Fixed check for a VOL's async compatibility (#3164) (#3224)Larry Knox2023-07-061-4/+6
| | | | | | | * cap flag fix in test * added async comp. output Co-authored-by: Scot Breitenfeld <brtnfld@hdfgroup.org>
* Adjust presets timeout and fix build script VS versions (#3216)Allen Byrne2023-06-302-8/+8
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* Hdf5 1 14 release action (#3198)Allen Byrne2023-06-297-129/+241
| | | | * Update actions for release option, fix branch for daily build * Scheduled workflows run on latest commit on the develop
* Add missing space in zip command (#3168)Allen Byrne2023-06-221-1/+1
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* Update github files/workflow from develop (#3154)Allen Byrne2023-06-196-10/+37
| | | * Update github files/workflow from develop
* Some minor version text changes (#3134)Allen Byrne2023-06-154-19/+3
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* Add java options to build scripts (#3136)mattjala2023-06-155-4/+19
| | | | | | | | | | | | | | | | | Previously, cmakehdf5 turned on compiling of the java interface by default due to a value set in cacheinit.cmake. Now, consistent with how Fortran and CPP interfaces are handled, the script overwrites this default value to disable the libraries, fixing #2958. I also implemented the --enable-java/--disable java options for cmakehdf5, and -java for buildhdf5. Allen said these scripts should mention that compilers are to be specified in environment variables, but missing compilers causes errors at the CMake level, and CMake's error messages are already pretty informative (See the one in #2958 about JAVA_COMPILER).
* Sync fortran src files with develop (#3126)Allen Byrne2023-06-1513-215/+384
| | | * Sync fortran src files with develop
* merges from develop (#3115)Allen Byrne2023-06-136-93/+123
| | | | | | | | * Fix release action that allows files to be uploaded. * Add autotools h5copy help test. * Update cmake tools.cmake file for clang-tidy. * CMake build is missing H5FDsubfiling.h * Correct snapshot location * Add note for issue 3056
* Fix doxygen and actions - merge from develop (#3109)Allen Byrne2023-06-1326-441/+530
| | | | | | | * Update the workflows to changes in develop * Disable java for error only action * Fix Fortran doxygen * add fortran alias * Merge changes from develop to fix actions
* Fix the default for API_VERSION to only allow one default (#3108)Allen Byrne2023-06-131-3/+0
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