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* HDFFV-10632 separate stderr and stdout in testsAllen Byrne2018-12-13103-565/+941
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* HDFVIEW-4 add H5A read/write functions to match H5DAllen Byrne2018-12-136-281/+1450
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* Merge pull request #1359 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:hdf5_1_10 to ↵Dana Robinson2018-12-0719-352/+148
|\ | | | | | | | | | | | | hdf5_1_10 * commit '21e73fd58d64fdba5e06e73e59be30d2a4c3fd59': Moved fixes for incorrectly installed header files to 1.10.
| * Moved fixes for incorrectly installed header files to 1.10.Dana Robinson2018-12-0619-352/+148
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* | Merge pull request #1361 in HDFFV/hdf5 from ↵Binh-Minh Ribler2018-12-073-28/+13
|\ \ | |/ |/| | | | | | | | | ~BMRIBLER/hdf5_1_10_bmr:hdf5_1_10 to hdf5_1_10 * commit '1f96bda4b77efb53c4eddb5414d50e51cdc44390': Fixed typos. Platforms tested: Linux/64 (jelly)
| * Fixed typos.Binh-Minh Ribler2018-12-073-28/+13
|/ | | | | Platforms tested: Linux/64 (jelly)
* Merge pull request #1354 in HDFFV/hdf5 from ~JHENDERSON/hdf5:hdf5_1_10 to ↵Jordan Henderson2018-12-052-0/+12
|\ | | | | | | | | | | | | hdf5_1_10 * commit '8255e0f81b65cc75b4cfa12c2f77b370006abe50': Fix for HDFFV-10629
| * Fix for HDFFV-10629Jordan Henderson2018-12-052-0/+12
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* Merge pull request #1352 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:hdf5_1_10 to ↵Scot Breitenfeld2018-12-051-0/+9
|\ | | | | | | | | | | | | hdf5_1_10 * commit '63ba86519b41558d46dd9faf919d12b6c279afac': updated with HDFFV-10511
| * Merge branch 'hdf5_1_10' of ↵Scot Breitenfeld2018-12-040-0/+0
| |\ | |/ |/| | | https://bitbucket.hdfgroup.org/scm/~brtnfld/hdf5_msb into hdf5_1_10
* | Merge pull request #1350 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:hdf5_1_10 to ↵Scot Breitenfeld2018-12-046-44/+178
|\ \ | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '456e22540f6e4366a0ef9d7744ee978a6ef6b3bb': Merge pull request #1325 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:J10511 to develop
| | * updated with HDFFV-10511Scot Breitenfeld2018-12-041-0/+9
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| * Merge pull request #1325 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:J10511 to developScot Breitenfeld2018-12-046-44/+178
|/ | | | | | * commit '9bbaca66ca1f987ede2f5c7e9c5938523a47262f': fixed sp. HDFFV-10511 -- Make fortran specific subroutines names PRIVATE
* Merge pull request #1340 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:hdf5_1_10 to ↵Dana Robinson2018-11-249-53/+85
|\ | | | | | | | | | | | | hdf5_1_10 * commit '2b616c7c183592010bcfa151060f52f729d01867': Renamed h5repart's -family_to_sec2 to -family_to_single.
| * Renamed h5repart's -family_to_sec2 to -family_to_single.Dana Robinson2018-11-239-53/+85
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* Merge pull request #1333 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:hdf5_1_10 to ↵Vailin Choi2018-11-134-160/+209
|\ | | | | | | | | | | | | hdf5_1_10 * commit 'c00b6863571f6af4b3be81185a0ca35823dad7b4': Merge pull request #1314 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to develop
| * Merge pull request #1314 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2018-11-134-160/+209
|/ | | | | | | | | develop * commit '51076d40617aa6f0236809c2c919cc6921b3bbc1': Fixed exit() to HDexit() in use_append_chunk.c and use_append_mchunks.c Fixed fprintf to HDfprintf in the following routines: 1) read_uc_file() in use_common.c 2) main() of use_append_chunk.c and use_append_mchunks.c Fix for HDFFV-10554 use_append_chunks in swmr use case test failure Fix the timing issue of the test by moving the open/close of the test file for the writer to use_append_chunk.c and use_append_mchunks.c.
* Merge pull request #1330 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:hdf5_1_10 to ↵Scot Breitenfeld2018-11-131-12/+0
|\ | | | | | | | | | | | | hdf5_1_10 * commit '7445c7d61ae06b8fefe2efbb362b51fbf57e10a7': HDFFV-10537: Remove installation of Fortran test mod files
| * HDFFV-10537: Remove installation of Fortran test mod filesM. Scot Breitenfeld2018-11-121-12/+0
|/ | | | Removed from autools install, cmake does not have this issue.
* Merge pull request #1326 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2018-11-122-37/+14
|\ | | | | | | | | | | | | | | hdf5_1_10 * commit '32d4f11c9c2c92cdb70476e99a0a65adc1815f3f': Fix target for commands TRILAB copy generated files
| * Fix target for commandsAllen Byrne2018-11-091-2/+2
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| * TRILAB copy generated filesAllen Byrne2018-11-091-35/+12
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* Merge pull request #1323 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2018-11-0829-693/+697
|\ | | | | | | | | | | | | | | | | hdf5_1_10 * commit 'a9cb14740f0528060c1e6b6bc4753a33d65c265f': TRILAB-82 fix coverity high-impact issues TRILABS: Merge CMake changes from develop Correct dependency of ext-libs
| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2018-11-086-7/+7
| |\ | |/ |/| | | | | * commit '79858bfde5ccdb27cc256252ebdc51c1a9f403b0': Snapshot version 1.10 release 5 (snap1)
* | Merge pull request #1322 in HDFFV/hdf5 from ~HDFTEST/hdf5_hft:hdf5_1_10 to ↵hdftest2018-11-086-7/+7
|\ \ | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit 'cd15e7eaa2d69979e668825d483c947082a54378': Snapshot version 1.10 release 5 (snap1)
| * | Snapshot version 1.10 release 5 (snap1)hdftest2018-11-086-7/+7
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| * TRILAB-82 fix coverity high-impact issuesAllen Byrne2018-11-0819-577/+561
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| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2018-11-082-347/+13
| |\ | |/ |/| | | | | | | | | * commit 'ec72efcd4ddb17145323bf93c5cc28fc59695c55': Improved comments Removed an old comment line. Moved tests to another file
* | Merge pull request #1321 in HDFFV/hdf5 from ↵Larry Knox2018-11-082-347/+13
|\ \ | | | | | | | | | | | | | | | | | | | | | | | | ~BMRIBLER/hdf5_1_10_bmr:hdf5_1_10 to hdf5_1_10 * commit '54261d6c92a031804d4756f6fadcc49872b0753b': Improved comments Removed an old comment line. Moved tests to another file
| * | Improved commentsBinh-Minh Ribler2018-11-081-2/+6
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| * | Removed an old comment line.Binh-Minh Ribler2018-11-081-1/+0
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| * | Merge branch 'hdf5_1_10' of ↵Binh-Minh Ribler2018-11-0715-49/+95
| |\ \ | |/ / |/| | | | | https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_1_10_bmr into hdf5_1_10
| * | Moved tests to another fileBinh-Minh Ribler2018-11-071-344/+7
| | | | | | | | | | | | | | | | | | | | | | | | Description: Moved the test function test_get_chunk_info from dsets.c to chunk_info.c because chunk_info.c was created for the purpose of testing chunk information. Platforms tested: Linux/64 (jelly)
| | * TRILABS: Merge CMake changes from developAllen Byrne2018-11-079-110/+130
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| | * Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2018-11-078-40/+1307
| | |\ | |_|/ |/| | | | | | | | | | | | | | * commit '91771bdf4d6c2ddcdbc127ee2f9d29525d490757': Updated new API functions Description: - Addressed additional review comments - Moved the test function test_get_chunk_info from dsets.c to chunk_info.c because chunk_info.c was created for the purpose of testing chunk information. Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1011test) Updated new API functions Description: - Per Vailin's review, revised H5Dget_chunk_info_by_coord to handle non-existing chunk and H5Dget_num_chunks and H5Dget_chunk_info to handle dataset with no data. - Addressed other review comments - Note that additional tests will be added as we need to send users these functions asap for feedback. Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1011test) New API functions Description: Added functions to query chunk information:
* | | Merge pull request #1306 in HDFFV/hdf5 from ↵Binh-Minh Ribler2018-11-078-40/+1307
|\ \ \ | |/ / | | | | | | | | | | | | | | | | | | | | | | | | | | | ~BMRIBLER/hdf5_1_10_bmr:hdf5_1_10 to hdf5_1_10 Merged now to create tar ball today for user asap. * commit 'a1a79203b8027631061cb626a5efdd37268752c2': Updated new API functions Description: - Addressed additional review comments - Moved the test function test_get_chunk_info from dsets.c to chunk_info.c because chunk_info.c was created for the purpose of testing chunk information. Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1011test) Updated new API functions Description: - Per Vailin's review, revised H5Dget_chunk_info_by_coord to handle non-existing chunk and H5Dget_num_chunks and H5Dget_chunk_info to handle dataset with no data. - Addressed other review comments - Note that additional tests will be added as we need to send users these functions asap for feedback. Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1011test) New API functions Description: Added functions to query chunk information:
| * | Updated new API functionsBinh-Minh Ribler2018-11-064-64/+432
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: - Addressed additional review comments - Moved the test function test_get_chunk_info from dsets.c to chunk_info.c because chunk_info.c was created for the purpose of testing chunk information. Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1011test)
| * | Updated new API functionsBinh-Minh Ribler2018-11-054-87/+239
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: - Per Vailin's review, revised H5Dget_chunk_info_by_coord to handle non-existing chunk and H5Dget_num_chunks and H5Dget_chunk_info to handle dataset with no data. - Addressed other review comments - Note that additional tests will be added as we need to send users these functions asap for feedback. Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1011test)
| * | Merge branch 'hdf5_1_10' of ↵Binh-Minh Ribler2018-10-290-0/+0
| |\ \ | | | | | | | | | | | | https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_1_10_bmr into hdf5_1_10
| * | | New API functionsBinh-Minh Ribler2018-10-295-1/+748
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: Added functions to query chunk information: H5Dget_num_chunks(dset_id, fspace_id, *nchunks) Gets the number of written chunks that intersect with the given dataspace. However, in this version, the intersection is not yet completed. Thus, the number of all written chunks will be returned. H5Dget_chunk_info_by_coord(dset_id, *coord, *filter_mask, *addr, *size) Given a chunk's coordinates, returns the chunk's filter, address, and size. H5Dget_chunk_info(dset_id, fspace_id, index, *coord, *filter_mask, *addr, *size) Given a chunk's index, returns the chunk's coordinates, filter, address, and size. The chunk belongs to a set of chunks that have nonempty intersection with the specified dataspace. However, in this version, the intersection is not yet completed, and the index is of all the written chunks. Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1011test)
| | | * Correct dependency of ext-libsAllen Byrne2018-11-061-6/+6
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* | | Merge pull request #1307 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2018-10-2915-49/+95
|\ \ \ | |_|/ |/| | | | | | | | | | | | | | | | | hdf5_1_10 * commit '81b2943b6fc01b52de2048d9503d524b2780112b': Fix typo in whitespace area Merge CMake changes from develop Improved cross-compiling and toolchains
| * | Fix typo in whitespace areaAllen Byrne2018-10-291-1/+1
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| * | Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2018-10-291-40/+40
| |\ \ | |/ / |/| | | | | | | | * commit 'b81adf00bcf45f4bce1c6f1ef8ee6c703e40b945': Trial commit Description: Just committing some typo fix to see whether my changes can be merged successfully to this branch Platforms tested: Linux/64 (jelly)
* | | Merge pull request #1304 in HDFFV/hdf5 from ↵Binh-Minh Ribler2018-10-281-40/+40
|\ \ \ | | |/ | |/| | | | | | | | | | | | | ~BMRIBLER/hdf5_1_10_bmr:hdf5_1_10 to hdf5_1_10 * commit '202d7403282230e2071412237ac7ba86ccb7f3db': Trial commit Description: Just committing some typo fix to see whether my changes can be merged successfully to this branch Platforms tested: Linux/64 (jelly)
| * | Trial commitBinh-Minh Ribler2018-10-261-40/+40
|/ / | | | | | | | | | | | | | | Description: Just committing some typo fix to see whether my changes can be merged successfully to this branch Platforms tested: Linux/64 (jelly)
| * Merge CMake changes from developAllen Byrne2018-10-2314-48/+94
|/ | | Improved cross-compiling and toolchains
* Merge pull request #1279 in HDFFV/hdf5 from ~BYRN/hdf5_merge_adb:hdf5_1_10 ↵Allen Byrne2018-10-0414-162/+263
|\ | | | | | | | | | | | | | | to hdf5_1_10 * commit 'a9e9cc29184b3b19d1161246264d722d731b5ec2': Fix typos and examples versions HDFFV-10575, 10332, 10531, 10594 and TRILAB-21
| * Fix typos and examples versionsAllen Byrne2018-10-043-3/+3
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| * HDFFV-10575, 10332, 10531, 10594 and TRILAB-21Allen Byrne2018-10-0412-160/+261
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