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* [svn-r27017] Modified Percival example to have different extents for the ↵Elena Pourmal2015-05-051-0/+300
| | | | | | | | source datasets for quick testing of H5Pset_virtual_dataspace_bounds. Tested on jam that the source datasets are extended and data is added as intended.
* [svn-r26984] Add support for unlimited selection being clipped in the middle ↵Neil Fortner2015-04-303-38/+62
| | | | | | | | | of a block. Add tests for this (pure selection tests, needs testing with VDS). Various bug fixes. Tested: ummon
* [svn-r26967] Refactor VDS unlimited dimension code to correctly handle case ↵Neil Fortner2015-04-296-58/+131
| | | | | | | | | where selections have discrete blocks and the extent is set by the minimum (untested, and there is still no way to set that preference). Tested: ummon
* [svn-r26962] Add support for unlimited selections to VDS code.Neil Fortner2015-04-2916-54/+696
| | | | | | | | Not tested (except for percival-unlim example) Fix percival-unlim example Other bug fixes/cleanup Tested: Fedora 64
* [svn-r26960] Added example of unlimited VDS using Percival use case.Elena Pourmal2015-04-281-0/+293
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* [svn-r26959] Fixed ERTERN print format and remove "Files" from virtual.Allen Byrne2015-04-281-4/+4
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* [svn-r26935] Add dataset name to mapping outputAllen Byrne2015-04-271-0/+5
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* [svn-r26910] Add clarification that the files are SourceAllen Byrne2015-04-231-1/+1
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* [svn-r26909] Convert layout to switch and add virtual. Print number of maps ↵Allen Byrne2015-04-231-56/+87
| | | | | | and file names only. Tested: local linux
* [svn-r26891] Fix bug in H5S__hyper_project_intersection that could cause an ↵Neil Fortner2015-04-221-13/+13
| | | | | | | | incorrect result. Fix typos. Tested: ummon
* [svn-r26883] Fix bug in H5S__hyper_project_intersection that could cause an ↵Neil Fortner2015-04-221-2/+2
| | | | | | incorrect result. Tested: ummon
* [svn-r26880] Fix errors where unlim_dim was not initialized in several ↵Neil Fortner2015-04-221-1/+19
| | | | | | places in H5Shyper.c Tested: Home computer
* [svn-r26879] Removed printf size_t warnings from VDS examples.Dana Robinson2015-04-225-5/+5
| | | | | | | size_t parameters are now printed using lu after being cast to unsigned long (safe for C89). Tested on: 64-bit linux VM
* [svn-r26878] Fix errors in unlimited selection serialize/deserializeNeil Fortner2015-04-2111-68/+76
| | | | | | Other minor fixes Tested: jam
* [svn-r26862] Fix bug in H5D__get_storage_size where it would issue an error ↵Neil Fortner2015-04-211-0/+1
| | | | | | | | unnecessarily for virtual datasets. Tested: ummon
* [svn-r26828] Implement support for unlimited selections (not supported by ↵Neil Fortner2015-04-1617-102/+1056
| | | | | | | | | VDS code yet). Add tests for unlimited selections. Various other minor changes. Tested: ummon
* [svn-r26798] Fix other storage layout whitespaceAllen Byrne2015-04-131-0/+18
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* [svn-r26794] Fix formatting for selection. Irregular reuses blocks and ↵Allen Byrne2015-04-132-23/+20
| | | | points for datasets however indentation after line breaks are an issue.
* [svn-r26781] Merge revisions 26305 through 26780 from trunk to vds branch.Neil Fortner2015-04-10397-12658/+7004
|\ | | | | | | Tested: ummon
| * [svn-r26778] fix path to configAllen Byrne2015-04-101-2/+2
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| * [svn-r26777] - Fix usage of the internal AC global dxplsMohamad Chaarawi2015-04-1018-250/+259
| | | | | | | | | | | | - allocate sieve buffer with calloc instead of malloc tested with h5committest
| * [svn-r26776] Add missing quote char.Allen Byrne2015-04-101-1/+1
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| * [svn-r26772] Fixed wrong fapl for H5Fopen when testing H5Iget_name with ↵Scot Breitenfeld2015-04-091-1/+1
| | | | | | | | | | | | anonymously created datatype. Tested: jam (using split virtual driver)
| * [svn-r26771] - remove unused internal dxpl properties and property lists ↵Mohamad Chaarawi2015-04-082-111/+30
| | | | | | | | | | | | | | | | from the AC layer - fix warnings in H5AC.c tested with h5committest
| * [svn-r26767] Added test to address HDFFV-3065:Scot Breitenfeld2015-04-081-2/+57
| | | | | | | | | | | | H5Iget_name on datatype that is not named returns no error Tested: h5committest
| * [svn-r26757] Description:Quincey Koziol2015-04-077-79/+64
| | | | | | | | | | | | | | | | Minor typos & code cleanups Tested on: MacOSX/64 10.10.2 (amazon) w/serial & parallel (Too minor to require h5committest)
| * [svn-r26751] Updated.Albert Cheng2015-04-071-1/+0
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| * [svn-r26750] HDFFV-8667: h5repack crashes on enumerated 8-bit type nested in ↵Albert Cheng2015-04-078-25759/+14
| | | | | | | | | | | | | | | | | | compound type. Added the testing to h5repack where it belongs. Undo the tests added to h5dump. Tested: h5committested plus tested in jam by hand.
| * [svn-r26746] install_parallel updates.Mohamad Chaarawi2015-04-071-118/+1
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| * [svn-r26737] Purpose: Fix daily test failureBinh-Minh Ribler2015-04-063-8/+14
| | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: - In DataType::DataType(const PredType& pred_type), using DataType::copy will invoke DataType::close() unnecessarily, which will produce undefined behavior. Changed to call H5Tcopy directly, code reuse is not useful in this case. - Also, fixed CommonFG::childObjVersion to return expected value outside of an if/else block. Platforms tested: Linux/ppc64 (ostrich) Linux/64 (platypus) Linux/32 2.6 (jam)
| * [svn-r26721] Disable failing testAllen Byrne2015-04-031-1/+1
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| * [svn-r26719] Add HL to default componentsAllen Byrne2015-04-031-1/+1
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| * [svn-r26712] Bug fix: cmakehdf5 broken because zlib is no longer configure ↵Albert Cheng2015-04-021-0/+11
| | | | | | | | | | | | | | | | | | | | | | | | | | | | in by default. That broke the testings as some testfiles have zlib compressed datasets. Added options control to enable the linking of zlib external libarary by default and turn off the szip library linking as szip library may not be avaiable. This matches the established settings. Tested: run cmakehdf5 by hand in jam and platypus. Also tested in wren but it failed in the testing stage. Also tried "cmakehdf5 --script" in jam. It failed.
| * [svn-r26711] Recommitting revisions 26669 and 26670, removing VPATH and ↵Larry Knox2015-04-0247-204/+6
| | | | | | | | | | | | | | | | redundant /usr/include and lib in fcompile and link flags checks, now that I have run reconfigure. Also changed paths to h5cc, etc. in scripts to run installed examples from relative paths to absolute paths. Tested with h5committest.
| * [svn-r26702] HDFFV-8667: h5repack crashes on enumerated 8-bit type nested in ↵Albert Cheng2015-04-011-3/+16
| | | | | | | | | | | | | | | | | | | | | | | | | | compound type. Description: The test added failed in some machines because the data file contains infinity values that different machines print them differently as "inf", "INF", "Inf", ... Solution: Added a "ignorecase" option to TOOLTEST() to do caseless matching between generated output vs expected output. This solved most machines problem for now. Tested: h5committest, emu by hand for both development and production modes. But cmake built h5dump failed to read the data file. Using the same source to build h5dump by autotools produced a h5dump that can read the test data file. Don't know why cmake could not produce a correct binary.
| * [svn-r26699] Generators are only built staticAllen Byrne2015-04-0110-21/+21
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| * [svn-r26695] Purpose: Fixed HDFFV-7947 (cont.)Binh-Minh Ribler2015-04-018-29/+9
| | | | | | | | | | | | | | | | | | | | | | | | Description: - Put back the UNUSED parameters in dsets test because the change to remove the warning last time caused failure in setting filter, in turn, caused failure in the test with such obscure/unrelated errors! - Added incRefCount() to other constructors that missed from last time. Platforms tested: Linux/64 (platypus) Linux/32 2.6 (jam) SunOS 5.11 (emu)
| * [svn-r26693] Remove use of obsolete HDF5_USE_FILTER_{internal}Allen Byrne2015-04-013-98/+22
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| * [svn-r26691] Move attribute define out of dynamic block.Allen Byrne2015-04-011-3/+3
| | | | | | | | Tested: windows
| * [svn-r26690] Fix error in H5Sextent_copyNeil Fortner2015-04-012-0/+34
| | | | | | | | | | | | | | | | When the selection is set to all, H5Sextent_copy did not update the number of elements in the selection in the destination space. Fixed H5Sextent_copy to do this. Added tests for this functionality. Tested: jam, koala, ostrich (h5committest)
| * [svn-r26685] Add new test from test scriptAllen Byrne2015-03-311-1/+19
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| * [svn-r26683] Remove internal filter checksAllen Byrne2015-03-312-33/+17
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| * [svn-r26682] Add new test from test scriptAllen Byrne2015-03-311-0/+3
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| * [svn-r26678] add ifdef checks and setting for __attribute__ in a public ↵Mohamad Chaarawi2015-03-313-6/+10
| | | | | | | | | | | | place to allow usage in public routines.
| * [svn-r26677] HDFFV-8957: h52gif crashes when run against one of our own ↵Albert Cheng2015-03-316-1/+25760
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | examples The tool claimed it could handle 24bit images but there was no code to handle it. (or might be there were but was removed by previous revisions.) Also discovered that it does not accept multiple images nor -p for palette as its user document and online help message indicated. Solution: Added code to verify dimension sizes are within 8 bit raster images limit and added tests to verify the tools correctness. Need to update user document tool. Tested: h5committested.
| * [svn-r26675] HDFFV-9201: Create md5s for bzip, gzip and zip filesAlbert Cheng2015-03-311-11/+15
| | | | | | | | | | | | An md5 checksum is produced for each archive created and stored in the md5 file Tested: jam by hand.
| * [svn-r26671] Since cmake always redoes everything from start, I change the ↵Albert Cheng2015-03-311-1/+1
| | | | | | | | | | | | | | | | logfiles to start fresh everytime. Tested: platypus
| * [svn-r26670] Remove VPATH and LONE_COLONLarry Knox2015-03-313-120/+1
| | | | | | | | Tested with h5committest
| * [svn-r26669] Remove code to prevent duplicate includes of /usr/include and ↵Larry Knox2015-03-301-45/+0
| | | | | | | | | | | | /usr/lib. Tested h5committest
| * [svn-r26667] Purpose: Fixed HDFFV-8766Binh-Minh Ribler2015-03-303-0/+56
| | | | | | | | | | | | | | | | | | | | | | | | Description: Per user Jason Newton request, the following constructor is added: H5File(hid_t existing_id); Also, fixed H5File::openFile to close current file first before re-using the object. Platforms tested: Linux/64 (platypus) Linux/32 2.6 (jam gnu and Intel 15.0) SunOS 5.11 (emu)