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* [svn-r27325] fix some bugs introduced by merger.Mohamad Chaarawi2015-07-023-8/+8
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* [svn-r27322] merge from trunk.. parallel still not working.Mohamad Chaarawi2015-07-0222-4411/+4106
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| * [svn-r27320] Fix uninitialized memory write valgrind errors in trunk. Did ↵Neil Fortner2015-07-018-16/+46
| | | | | | | | | | | | | | | | this by modifying metadata cache clients to clear unused memory in the buffer after serializing. Tested: ummon; jam, koala, ostrich (h5committest)
| * [svn-r27313] switch internal cdash URLAllen Byrne2015-06-301-2/+2
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| * [svn-r27298] Description:Quincey Koziol2015-06-295-134/+159
| | | | | | | | | | | | | | | | | | Separate H5AC layer from using package-scoped pieces of the H5C layer, moving from including H5Cpkg.h to H5Cprivate.h. Tested on: MacOSX/64 10.10.3 (amazon) w/serial, parallel & production Linux/32 2.6.x (jam) w/serial & parallel
| * [svn-r27296] Description:Quincey Koziol2015-06-297-38/+28
| | | | | | | | | | | | | | | | | | Correct error with braces around macro (in production builds), also clean up a few warnings. Tested on: MacOSX/64 10.10.3 (amazon) w/serial, parallel & production Linux/32 2.6 (jam) w/serial & parallel
| * [svn-r27294] Description:Quincey Koziol2015-06-296-711/+320
| | | | | | | | | | | | | | | | | | | | Clean up parameters to H5C__flush_single_entry: accept cache entry instead of address, and make new flag for deleting entry from skiplist on destroy instead of a separate parameter to the routine. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial & parallel
| * [svn-r27293] Description:Quincey Koziol2015-06-2712-3512/+3666
| | | | | | | | | | | | | | | | Split parallel metadata cache code into separate source code modules. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel (too minor for h5committest)
| * [svn-r27292] Description:Quincey Koziol2015-06-276-22/+62
| | | | | | | | | | | | | | | | | | | | Bring 'fail if unknown always' object header message flag from the avoid_truncate branch, strengthen error checking for unknown messages, and try to catch object header code configurations at compile time (instead of runtime). Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel (h5committest forthcoming)
* | [svn-r27295] - move writing the superblock extension messages from ↵Mohamad Chaarawi2015-06-299-31/+228
| | | | | | | | | | | | | | preserialize to notify callback. - update notify callback to add H5F_t * parameter.. might need to add a dxpl. - parallel t_cache test still failing.
* | [svn-r27291] Description:Quincey Koziol2015-06-276-20/+60
| | | | | | | | | | | | | | | | | | | | Add test for 'fail if unknown always' object header message flag, strengthen error checking for unknown messages, and try to catch object header code configurations at compile time (instead of runtime). Tested on: MacOSX/64 10.10.3 (amazon) w/serial (h5committest not required for this branch)
* | [svn-r27289] merge from trunk.Mohamad Chaarawi2015-06-26121-13289/+20259
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| * [svn-r27283] Change generic directory in tarballs to hdfsrc.Larry Knox2015-06-251-4/+4
| | | | | | | | Remove some commented lines.
| * [svn-r27280] Add temporary file to create tarballs for buildbot (and ↵Larry Knox2015-06-242-0/+395
| | | | | | | | possibly all) daily testing. When the behavior is acceptable, the changes should be merged into the regular release script as a --revision option.
| * [svn-r27278] Merge of 27270 from trunk. Fixes HDFFV-9119 and HDFFV-9421.Dana Robinson2015-06-246-84/+110
| | | | | | | | | | | | | | | | | | | | | | | | | | Changes that allow the autotools to correctly deal with inline functions. - Inline markup schemes are now checked with AC_COMPILE_IFELSE tests instead of AC_C_INLINE. - The inline designator is now H5_INLINE instead of H5_inline. This is now set in H5private.h instead of H5pubconf.h. Tested on: h5committest
| * [svn-r27271] fix a few warnings in t_mpi.cMohamad Chaarawi2015-06-231-4/+3
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| * [svn-r27267] Combine float checks and int checks to eliminate possible conflictsAllen Byrne2015-06-221-199/+213
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| * [svn-r27262] Snapshot version 1.9 release 222HDF Tester2015-06-2213-24/+24
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| * [svn-r27252] Fix whitespaceAllen Byrne2015-06-191-15/+15
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| * [svn-r27243] fix problem with encoding/decoding external fapl for lapls.Mohamad Chaarawi2015-06-188-25/+41
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| * [svn-r27238] Add function prototype for local functionAllen Byrne2015-06-181-29/+30
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| * [svn-r27237] Description:Quincey Koziol2015-06-1889-12802/+19316
| | | | | | | | | | | | | | | | | | Merge v3 metadata cache changes to trunk. Yay! :-) Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial & parallel (daily tested on branch)
| * [svn-r27216] The comments in this example were incorrect regarding the resultingBarbara Jones2015-06-161-3/+3
| | | | | | | | dataset. They were updated to match the output of the file. (HDFFV-637)
* | [svn-r27210] merge from trunk.Mohamad Chaarawi2015-06-16317-10212/+8226
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| * [svn-r27207] use "closing" flag instead of always TRUE in the truncate call.Mohamad Chaarawi2015-06-151-1/+1
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| * [svn-r27206] fix for HDFFV-9418. Mohamad Chaarawi2015-06-151-8/+9
| | | | | | | | | | | | | | - Moving truncate to H5F_flush() where it was done a long time ago. - Add a second H5AC_flush() call after the truncate is done to make sure we write the correct EOA. tested with h5committest
| * [svn-r27204] Description:Quincey Koziol2015-06-1522-2158/+1844
| | | | | | | | | | | | | | | | | | Clean up compiler warnings before merging in v3 metadata cache changes from branch. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial & parallel
| * [svn-r27202] Except one file is used by other tests!Allen Byrne2015-06-151-1/+1
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| * [svn-r27201] Changed location of packed bits testfilesAllen Byrne2015-06-151-54/+54
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| * [svn-r27199] Description:Quincey Koziol2015-06-138-2157/+1201
| | | | | | | | | | | | | | | | | | Large code cleanups and optimizations, in preparation for the upcoming v3 metadata cache merge. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial & parallel
| * [svn-r27198] Set "entire_chunk" to false in H5D__chunk_write() for point ↵Vailin Choi2015-06-122-4/+5
| | | | | | | | | | | | selection as duplicate points are not checked to determine that it is really an "entire chunk". The bug appears from running the mdset.c test. This is a short-term fix for the problem.
| * [svn-r27196] Move pbbits file to subfolderAllen Byrne2015-06-1255-137/+137
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| * [svn-r27185] fix more instances where both mpi is_initialized and ↵Mohamad Chaarawi2015-06-103-88/+96
| | | | | | | | | | | | is_finalized need to be checked before making any MPI calls. tested with h5committest.
| * [svn-r27172] Change disable to skip big test on cygwinAllen Byrne2015-06-092-8/+10
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| * [svn-r27171] Disable big test on cygwinAllen Byrne2015-06-092-24/+29
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| * [svn-r27163] update manifest for newly added file.Mohamad Chaarawi2015-06-081-0/+1
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| * [svn-r27162] fix for HDFFV-9412:Mohamad Chaarawi2015-06-085-20/+112
| | | | | | | | | | | | | | - Check for mpi is_initialized and is_finalized before making MPI calls in init/terminate of HDF5. - Add a test to make sure we can make serial HDF5 calls from rank 0 after MPI_Finalize is called. tested with h5committest
| * [svn-r27159] Snapshot version 1.9 release 221HDF Tester2015-06-0813-24/+24
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| * [svn-r27158] missed rename if UNUSED to H5_ATTR_UNUSED in trace script.Mohamad Chaarawi2015-06-071-1/+1
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| * [svn-r27144] Description:Quincey Koziol2015-06-0337-501/+635
| | | | | | | | | | | | | | | | | | | | Normalize trunk against the metadata_cache_merge branch, in preparation for merging the branch into the trunk. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/64 2.6.x (koala) w/serial Linux/32 2.6.x (jam) w/serial & parallel
| * [svn-r27142] Add optional variable for version extensionAllen Byrne2015-06-031-23/+24
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| * [svn-r27133] - Add a new attribute function characterstic for format:Mohamad Chaarawi2015-06-01172-1266/+1279
| | | | | | | | | | | | | | | | * H5_ATTR_FORMAT(X,Y,Z) __attribute__((format(X, Y, Z))) - Rename UNUSED attribute characterstic to H5_ATTR_UNUSED. - Rename NORETURN attribute characterstic to H5_ATTR_NORETURN tested with h5committest.
| * [svn-r27130] Fix warnings in H5TconvJerome Soumagne2015-06-011-91/+132
| | | | | | | | | | | | Remove H5T_INIT_INTERFACE from H5Tconv Add macro in H5Tconv to check overflow when using H5T_CONV_uS
| * [svn-r27129] Fix warnings in H5TbitJerome Soumagne2015-06-011-5/+7
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| * [svn-r27128] Fix warnings in H5TdbgJerome Soumagne2015-06-011-2/+44
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| * [svn-r27127] Snapshot version 1.9 release 220HDF Tester2015-06-0113-24/+24
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| * [svn-r27114] Fixed spelling and which file is created with the program.Scot Breitenfeld2015-05-271-1/+1
| | | | | | | | Tested: none -- comments only.
| * [svn-r27111] move undef of __attribute__ back to private and remove its ↵Mohamad Chaarawi2015-05-264-11/+6
| | | | | | | | usage from public routines.
| * [svn-r27110] Snapshot version 1.9 release 219HDF Tester2015-05-2413-24/+24
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| * [svn-r27097] Fixed a typo in test/th5o.c that caused the wrong property listDana Robinson2015-05-181-2/+2
| | | | | | | | | | | | ID to be checked. Tested on: h5committest
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