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| | * | | | | | | | | | | | | [svn-r27547] Fill in public function descriptions from RM entries.Neil Fortner2015-08-212-15/+94
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested: ummon
| | * | | | | | | | | | | | | [svn-r27546] Add tests for H5O__dset_bh_info (H5Oget_info) and unlimited ↵Neil Fortner2015-08-214-13/+73
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | selections in a region reference. Tested: ummon
| | * | | | | | | | | | | | | [svn-r27543] Add tests to cover remaining code coverage assertions in ↵Neil Fortner2015-08-203-29/+702
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | H5Shyper.c. Add more tests for unlimited selections. Fix bug related to empty unlimited source dataset. Tested: ummon
| | * | | | | | | | | | | | | [svn-r27538] Add tests to cover remaining code coverage assertions in src ↵Neil Fortner2015-08-206-33/+418
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | directory except for those in H5Doh.c and H5Shyper.c. Tested: ummon
| | * | | | | | | | | | | | | [svn-r27528] Modify printf implementation to not open source datasets that ↵Neil Fortner2015-08-192-4/+13
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | were previously opened when calculating the VDS extent, instead assuming they still exist. Tested: ummon
| | * | | | | | | | | | | | | [svn-r27527] Add tests to hit code coverage assertions in H5Olayout.c.Neil Fortner2015-08-193-13/+54
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Fix issue in VDS delete routine. Tested: ummon
| | * | | | | | | | | | | | | [svn-r27520] Add new test for all 3 selection types in the same VDS.Neil Fortner2015-08-182-42/+1097
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Minor cleanup in the tests. Tested: ummon
| | * | | | | | | | | | | | | [svn-r27506] H5Dset_extent no longer holds all printf source datasets open.Neil Fortner2015-08-148-908/+925
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Other items identified during reviews. Tested: ummon
| | * | | | | | | | | | | | | [svn-r27505] Add support for H5Dset_extent for VDS.Neil Fortner2015-08-144-61/+420
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Add tests for this. Other bug fixes/cleanup Tested: Kubuntu 64 (home computer)
| | * | | | | | | | | | | | | [svn-r27504] Change comments/code around to reflect decision to have virtual ↵Neil Fortner2015-08-134-8/+17
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | datasets always return TRUE when their is_alloc function is called. Tested: ummon
| | * | | | | | | | | | | | | [svn-r27501] Add mapping validity checking to VDS open.Neil Fortner2015-08-124-78/+157
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Other minor fixes/cleanup. Tested: ummon
| | * | | | | | | | | | | | | [svn-r27498] Add support for I/O after reopening a VDS with unlimited and/or ↵Neil Fortner2015-08-122-73/+449
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | printf mappings without calling H5Dget_space first. Add tests for this. Other minor fixes/cleanup. Tested: ummon
| | * | | | | | | | | | | | | [svn-r27481] Add support for offset selections passed to H5Pset_virtual.Neil Fortner2015-08-072-6/+207
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Add test for this. Tested: ummon
| | * | | | | | | | | | | | | [svn-r27479] Add checking for invalid inputs to H5Dset_virtual: point ↵Neil Fortner2015-08-0711-42/+306
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | selections, incorrect numbers of elements selected, incorrect "slice" through limited dimensions, incorrect number of printf substitutions. Patch source selection space extent with bounds of selection if extent is unknown before returning via H5Pget_virtual_srcspace. Write updated VDS dataspace to file when it changes due to unlimited selections. Other minor fixes/cleanup. Tested: ummon
| | * | | | | | | | | | | | | [svn-r27453] Merge revisions 27418 through 27452 from trunk to vds branch.Neil Fortner2015-08-0324-24/+637
| | |\ \ \ \ \ \ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested: ummon
| | * | | | | | | | | | | | | | [svn-r27450] Add descriptions for all non-public functions.Neil Fortner2015-07-317-45/+156
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Other comments. Add some input checking. Tested: ummon
| | * | | | | | | | | | | | | | [svn-r27425] Implement support for H5Pequal with VDS properties.Neil Fortner2015-07-222-1/+54
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Testing for H5Pequal with VDS. Tested: ummon
| | * | | | | | | | | | | | | | [svn-r27424] Implement support for h5debug for VDS.Neil Fortner2015-07-226-50/+250
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Implement support for H5Pencode/decode with VDS properties. Testing for H5Pencode/decode with VDS. Relax assertion check for number of elements written to buffer as we do not check for overlaps in mappings. Other minor fixes/cleanup. Tested: ummon
| | * | | | | | | | | | | | | | [svn-r27420] Fixed VDS test to handle the family driver correctly.Neil Fortner2015-07-213-44/+79
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested: ummon
| | * | | | | | | | | | | | | | [svn-r27419] Merge revisions 27394 through 27418 from trunk to vds branch.Neil Fortner2015-07-2123-247/+969
| | |\ \ \ \ \ \ \ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested: ummon
| | * | | | | | | | | | | | | | | [svn-r27398] Fixed potential issue layouts with compilers that do not ↵Neil Fortner2015-07-151-0/+3
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | support designated initializers. Tested: ummon
| | * | | | | | | | | | | | | | | [svn-r27397] Merge revisions 27255 through 27393 from trunk to vds branch.Neil Fortner2015-07-1568-4622/+4921
| | |\ \ \ \ \ \ \ \ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested: ummon
| | * | | | | | | | | | | | | | | | [svn-r27324] Remove extra character on end of file nameAllen Byrne2015-07-021-1/+1
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| | * | | | | | | | | | | | | | | | [svn-r27323] Implement support for H5Dflush for VDS.Neil Fortner2015-07-025-139/+350
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Implement support for H5Ocopy on VDS. Testing for H5Ocopy on VDS. Fix check-vfd failure. Other minor fixes/cleanup. Note there is a preexisting failure in h5repack testing. Tested: ummon
| | * | | | | | | | | | | | | | | | [svn-r27321] Fixed VDS test framework to check for zlib,Allen Byrne2015-07-024-30/+51
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | and fix file copy list paths
| | * | | | | | | | | | | | | | | | [svn-r27317] switch internal cdash URLAllen Byrne2015-06-301-1/+1
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| | * | | | | | | | | | | | | | | | [svn-r27309] switch public cdash URLAllen Byrne2015-06-301-1/+1
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| | * | | | | | | | | | | | | | | | [svn-r27300] Add h5repack and h5diff VDS testsAllen Byrne2015-06-302-167/+240
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| | * | | | | | | | | | | | | | | | [svn-r27284] Modify VDS implementation to always use FAPL and DAPL from VDS ↵Neil Fortner2015-06-256-55/+118
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | file and dataset to open source files and datasets, instead of using the default property lists. Modify VDS to reject attempts at parallel I/O, fix parallel compile error. Modify VDS to not write fill value to memory buffer if the fill value is undefined. Other minor fixes/cleanup. Tested: ummon
| | * | | | | | | | | | | | | | | | [svn-r27266] Change tests to use simple mode - eliminates native type use.Allen Byrne2015-06-229-161/+165
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Combine float checks and int checks to eliminate possible conflicts
| | * | | | | | | | | | | | | | | | [svn-r27265] corrected test paramsAllen Byrne2015-06-221-6/+6
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| | * | | | | | | | | | | | | | | | [svn-r27256] Merge revisions 27102 through 27255 from trunk to vds branch.Neil Fortner2015-06-19114-17072/+22334
| | |\ \ \ \ \ \ \ \ \ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested: ummon
| | * | | | | | | | | | | | | | | | | [svn-r27249] Used versioned APIs to fix the daily tests errors with the ↵Elena Pourmal2015-06-198-24/+24
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | --with-default-api-version=v16 builds. Tested on jam.
| | * | | | | | | | | | | | | | | | | [svn-r27248] Daily tests in the VDS brnach reported missing file in ↵Elena Pourmal2015-06-191-0/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | MANIFEST. Fixed.
| | * | | | | | | | | | | | | | | | | [svn-r27246] Remove "clipped" status from unlimited selections, decoupling ↵Neil Fortner2015-06-188-607/+392
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | them from the extent. Improve algorithm for calculation of VDS extent by removing the need for a temporary copy of a dataspace. Other minor fixes/cleanup. Tested: ummon
| | * | | | | | | | | | | | | | | | | [svn-r27245] Maintenance: Eiger example had wrong printf type of name (had ↵Elena Pourmal2015-06-181-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | dimension number in it). Fixed. Tested on jam.
| | * | | | | | | | | | | | | | | | | [svn-r27239] Add function prototype for local functionAllen Byrne2015-06-181-29/+30
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| | * | | | | | | | | | | | | | | | | [svn-r27236] The vds h5diff filesAllen Byrne2015-06-173-0/+29
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| | * | | | | | | | | | | | | | | | | [svn-r27235] Add vds h5diff testsAllen Byrne2015-06-172-43/+93
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| | * | | | | | | | | | | | | | | | | [svn-r27234] Add layout test from virtual to Contiguous and Compact ↵Allen Byrne2015-06-171-1/+30
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | generated files to clearall
| | * | | | | | | | | | | | | | | | | [svn-r27233] Add layout test from virtual to Contiguous and CompactAllen Byrne2015-06-171-35/+85
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| | * | | | | | | | | | | | | | | | | [svn-r27231] Fix bug in configure that prevented running make.Neil Fortner2015-06-172-2/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested: ummon
| | * | | | | | | | | | | | | | | | | [svn-r27229] remove copy-paste errors from listAllen Byrne2015-06-172-12/+0
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| | * | | | | | | | | | | | | | | | | [svn-r27224] Fix bug that prevented reading from datasets with unlimited ↵Neil Fortner2015-06-171-31/+41
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | mappings with missing source datasets. Decided not to attempt to open the source dataset in this case, as doing so could create issues related to the sizing of the VDS. Users should call H5Dget_space to open these datasets. No regression test yet. Tested: ummon
| | * | | | | | | | | | | | | | | | | [svn-r27220] Maintenance: Added copyrigth; removed read buffer ↵Elena Pourmal2015-06-161-5/+15
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | initialization since fill value feature works now. Tested on jam.
| | * | | | | | | | | | | | | | | | | [svn-r27219] Add h5dump and h5 ls VDS test scripts to autools configureAllen Byrne2015-06-166-89/+98
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| | * | | | | | | | | | | | | | | | | [svn-r27218] Add VDS tests to h5lsAllen Byrne2015-06-1610-1/+503
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| | * | | | | | | | | | | | | | | | | [svn-r27215] Fix issue where % characters could not be used in non-printf ↵Neil Fortner2015-06-165-74/+174
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | mappings. Other minor fixes/cleanup. Tested: ummon
| | * | | | | | | | | | | | | | | | | [svn-r27214] Fixed a bug on Windows where dcpls were set to be chunked and ↵Dana Robinson2015-06-162-3/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | not virtual. This was due to a simple copy-paste issue in the initializer that is used when C99 initializers are not available. Also fixed a dims array size error in the vds test. Tested on: 64-bit Win7 with VS2013
| | * | | | | | | | | | | | | | | | | [svn-r27197] Improve performance of "printf" VDS with selections in the file ↵Neil Fortner2015-06-124-20/+97
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | space - the library no longer iterates over all source datasets in the printf mapping, it now only looks at the ones that could be involved in I/O (the ones whose bounds overlap with the selection in the unlimited dimension). Tested: ummon