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* [svn-r27768] Description:Quincey Koziol2015-09-14382-4500/+4932
| | | | | | | | | | | | | | | | | | | | | | Complete revamp of package initialization/shutdown mechanism in the library. Each package now has a single init/term routine. This new way should avoid packages being re-initialized during library shutdown and is also be _much_ more proactive about giving feedback for resource leaks internal to the library. Introduces a new "module" header file for packages in the library (e.g src/H5Fmodule.h) which sets up some necessary package configuration macros for the FUNC_ENTER/LEAVE macros. (The VFL drivers have their own slightly modified version of this header, src/H5FDdrvr_module.h) Also cleaned up a bunch of resources leaks all across the library and tests, along with addressing many warnings, as I encountered them. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel Linux/64 3.10.x (kituo) w/serial & parallel Linux/64 2.6.x (ostrich) w/serial
* [svn-r27767] Snapshot version 1.9 release 231HDF Tester2015-09-1413-24/+24
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* [svn-r27755] Changed direct VFD default to OFF in CMake to match Autotools.Dana Robinson2015-09-111-1/+1
| | | | Tested on: jam w/ CMake
* [svn-r27754] HDFFV-548:H5LT patches for F90 Lite API in 1.8.0 BetaScot Breitenfeld2015-09-103-576/+910
| | | | tested: h5committest
* [svn-r27753] Removed duplicated attribute macro checks. Moved canonical ↵Dana Robinson2015-09-102-25/+14
| | | | | | | | | attribute macro checks from src/H5api_adapt.h to H5private.h, which is where they belong anyway. Tested on: h5committest (manually inspected for attribute warnings)
* [svn-r27752] Merge of r27751 from 1.8 branchDana Robinson2015-09-101-0/+3
| | | | | | | Added a comment to config/ibm-flags that describes the purpose of the -qflag=w:w compiler flag. Tested on: N/A (no access to AIX, comment only)
* [svn-r27747] Correct name of targetAllen Byrne2015-09-101-1/+1
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* [svn-r27734] Fixed MANIFESTDana Robinson2015-09-101-1/+0
| | | | Tested on: bin/chkmanifest
* [svn-r27731] Removed the obsolete config/powerpc-ibm-aix5.x file.Dana Robinson2015-09-101-21/+0
| | | | Tested on: Nothing. I have no access to an AIX machine.
* [svn-r27728] Merge of r27713 from revise_chunksDana Robinson2015-09-091-1/+1
| | | | | | | | Added -qflag=w:w to config/ibm-flags. This will suppress informational messages on AIX, suppressing thousands of "__attribute__ is non-portable" messages in the AIX nightly test output. Tested on: Nothing. I have no access to an AIX machine.
* [svn-r27722] Updated the gnu config to cover gcc 5.2*.Dana Robinson2015-09-091-1/+1
| | | | Tested on: jam w/ gcc 5.2.0
* [svn-r27720] Merge changes from masterAllen Byrne2015-09-091-9/+13
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* [svn-r27716] Publish both static and shared mod files in binaries.Allen Byrne2015-09-091-7/+11
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* [svn-r27710] Description:Quincey Koziol2015-09-0913-671/+1520
| | | | | | | | | Bring the "metadata rings" code from its branch (mdc_rings_v2) to the trunk. (This change will support the page buffering feature) Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r27707] Description:Quincey Koziol2015-09-094-157/+97
| | | | | | | | | Misc. minor cleanups in preparation for merging "metadata rings" branch to trunk. Tested on: MacOSX/64 10.10.5 (amazon) w/serial (Too minor to require h5committest)
* [svn-r27703] Publish both static and shared mod files in binaries.Allen Byrne2015-09-082-11/+71
| | | | Tested: local linux
* [svn-r27699] Removed some configure checks for obsolete Unix variants.Dana Robinson2015-09-084-105/+22
| | | | | | The H5pubconf.h.in file that CMake uses was also updated. Tested on: h5committest
* [svn-r27692] Changed the autotools files so that the high-level library is ↵Dana Robinson2015-09-072-5/+25
| | | | | | | | | | | | | | | unsupported when building the thread-safe library. Configure will quit with an error when --disable-hl or --enable-unsupported is not used with --enable-threadsafe. Fixes HDFFV-8719 Tested on: h5committest configure w/ various combinations of --enable-threadsafe, --disable-hl, and --enable-unsupported
* [svn-r27690] Snapshot version 1.9 release 230HDF Tester2015-09-0713-24/+24
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* [svn-r27686] Merge of r27684 from autotools_reworkDana Robinson2015-09-062-30/+0
| | | | | | | Removed _BSD_SOURCE and _DEFAULT_SOURCE from the autotools C flags. They are no longer needed by the library. Fixes HDFFV-9079. Tested on: h5committest
* [svn-r27682] Restored commented-out _POSIX_C_SOURCE line in configure.ac.Dana Robinson2015-09-052-2/+2
| | | | Tested on: h5committest
* [svn-r27676] Fix dependencies of generated fileAllen Byrne2015-09-041-17/+20
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* [svn-r27675] Removed library checks for nsl and socket from the autotools ↵Dana Robinson2015-09-045-134/+1
| | | | | | | | | | | | configure on Solaris. The nsl and socket libraries are no longer used by the library. Fixes HDFFV-9118. Tested on: h5committest (CMake fortran fails due to an unrelated error) jam w/ CMake
* [svn-r27674] Attempt to fix race condition on windowsAllen Byrne2015-09-031-28/+44
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* [svn-r27671] Move fortran id check to fortran sectionAllen Byrne2015-09-031-16/+13
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* [svn-r27670] Remove SYMBOLS option - includes default checks. Pulled from ↵Allen Byrne2015-09-031-3/+2
| | | | master.
* [svn-r27668] Increase timeout for objcopyAllen Byrne2015-09-031-0/+2
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* [svn-r27663] Removed the lines:Scot Breitenfeld2015-09-022-114/+6
| | | | | | | | | | | # Source files are used for both the library and fortranlib_test. # Automake will complain about this without the following workaround. fortranlib_test_FCFLAGS=$(AM_FCFLAGS) fortranlib_test_CFLAGS=$(AM_CFLAGS) because they caused Fortran build rules (.f90.o, .F90.o) to be ignored, causing the CPP flags to be passed to the Fortran compiler, causing the xlf compiler to fail. Tested: ostrich (xlf), h5committest
* [svn-r27661] Always use static mod files.Allen Byrne2015-09-012-16/+4
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* [svn-r27656] HDFFV-9515: repack failed with 5 digit filter ids because a ↵Allen Byrne2015-09-011-478/+478
| | | | | | local variable in the parse routine was not large enough. Tested: local linux and windows
* [svn-r27653] Merge of r27645 from the autotools branch.Dana Robinson2015-09-014-17/+5
| | | | | | | | | | | | | | Updates to older special config files in configure.ac: - solaris2.x renamed to solaris. There are recent changes to this file but the "2.x" is misleading since the changes are applied to all versions. - Removed support for OSF 4.x/5.x (Digital and Tru64 Unix). We no longer have the config files for these. Tested on: h5committest
* [svn-r27648] Fortran executables depend on modules created by test library, ↵Allen Byrne2015-09-011-1/+16
| | | | add command to explictly enforce the building of the library before building executables.
* [svn-r27647] Added compiler check for PGI and CMake version.Scot Breitenfeld2015-09-012-0/+15
| | | | | CMake must be > v3.3 to compile with PGI due to CMake bug in earlier versions.
* [svn-r27642] Removed comments from MANIFEST regarding distributing theDana Robinson2015-09-011-2/+0
| | | | | | | | | gen_* files in test/. These files will remain distributable since they are needed if a user specifies --enable-build-all. Fixes HDFFV-8236 Tested on: jam (bin/chkmanifest only)
* [svn-r27641] Merge of r27616 from autotools_reworkDana Robinson2015-09-011-1/+1
| | | | | | | | | Replaced AC_CONFIG_HEADER (obsolete macro) with AC_CONFIG_HEADERS followed by bin/reconfigure (which changed nothing at this time). Fixes HDFFV-9284 Tested on: jam
* [svn-r27631] Description:Quincey Koziol2015-08-316-49/+59
| | | | | | | | Make error values from hyperslab operations clearer. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (Too minor to require h5committest)
* [svn-r27627] Change hardcoded HDF5TESTEXPRESS value to use a CMake variable ↵Allen Byrne2015-08-313-16/+25
| | | | HDF_TEST_EXPRESS.
* [svn-r27626] Various minor warning fixes before major SWMR and VDS merges.Dana Robinson2015-08-3150-653/+948
| | | | | | | | | | | gcc 4.9.2 was used to create the warning list - implicit casts - shadowed variables - various enum issues - other minor fixes (comments, unused macros, etc.) Tested on: h5committest
* [svn-r27625] Added preprocessor commands for PGI compiler.Scot Breitenfeld2015-08-3180-199/+252
| | | | tested: h5committest
* [svn-r27624] Update bin/bbrelease to handle changed output of 'svn info' ↵Larry Knox2015-08-311-1/+1
| | | | | | with svn version 1.8. Change to experimental release script bbrelease for buildbot to eliminate extra line in version output.
* [svn-r27623] Added some parallel #ifdefs to H5Ocache.c to quiet compilerDana Robinson2015-08-311-1/+21
| | | | | | warnings. tested on: h5committest
* [svn-r27622] Snapshot version 1.9 release 229HDF Tester2015-08-3113-24/+24
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* [svn-r27618] Description:Quincey Koziol2015-08-292-6/+4
| | | | | | | | | | Align w/vds branch: Remove extraneous sieve buffer flush in chunk flush callback, and move error check out of the middle of retrieving properties for dataset. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r27615] Description:Quincey Koziol2015-08-292-40/+48
| | | | | | | | | Protect dataset that's closing from being flushed again, if it's the last one holding a file open. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r27614] Description:Quincey Koziol2015-08-291-12/+28
| | | | | | | | | Align w/vds branch: Change code in H5O_layout_copy() to use switch for different types of dataset layouts. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r27613] Description:Quincey Koziol2015-08-294-67/+82
| | | | | | | | | Align w/vds branch: Move code for initializing contiguous datasets into layout 'init' callback. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r27612] Description:Quincey Koziol2015-08-2911-161/+180
| | | | | | | | | Align w/vds branch: Whitespace cleanup, move common code for opening a dataset into a new routine, misc. style cleanups. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest upcoming)
* [svn-r27605] Fix potential memory error when using a dataspace that was ↵Neil Fortner2015-08-282-1/+44
| | | | | | | | created with H5Screate and had its extent set by H5Sextent_copy. Tested: jam, ostrich (h5committest)
* [svn-r27601] Removed the H5TSprivate.h include from H5.c. It's not needed ↵Dana Robinson2015-08-271-1/+0
| | | | | | | | and causes problems on Windows. Tested on: jam, with and without --enable-threadsafe
* [svn-r27597] Update text files to match 1.8 changesAllen Byrne2015-08-274-1439/+362
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