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* [svn-r27324] Remove extra character on end of file nameAllen Byrne2015-07-021-1/+1
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* [svn-r27323] Implement support for H5Dflush for VDS.Neil Fortner2015-07-025-139/+350
| | | | | | | | | | Implement support for H5Ocopy on VDS. Testing for H5Ocopy on VDS. Fix check-vfd failure. Other minor fixes/cleanup. Note there is a preexisting failure in h5repack testing. Tested: ummon
* [svn-r27321] Fixed VDS test framework to check for zlib,Allen Byrne2015-07-024-30/+51
| | | | and fix file copy list paths
* [svn-r27317] switch internal cdash URLAllen Byrne2015-06-301-1/+1
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* [svn-r27309] switch public cdash URLAllen Byrne2015-06-301-1/+1
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* [svn-r27300] Add h5repack and h5diff VDS testsAllen Byrne2015-06-302-167/+240
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* [svn-r27284] Modify VDS implementation to always use FAPL and DAPL from VDS ↵Neil Fortner2015-06-256-55/+118
| | | | | | | | | | | | file and dataset to open source files and datasets, instead of using the default property lists. Modify VDS to reject attempts at parallel I/O, fix parallel compile error. Modify VDS to not write fill value to memory buffer if the fill value is undefined. Other minor fixes/cleanup. Tested: ummon
* [svn-r27266] Change tests to use simple mode - eliminates native type use.Allen Byrne2015-06-229-161/+165
| | | | Combine float checks and int checks to eliminate possible conflicts
* [svn-r27265] corrected test paramsAllen Byrne2015-06-221-6/+6
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* [svn-r27256] Merge revisions 27102 through 27255 from trunk to vds branch.Neil Fortner2015-06-19114-17072/+22334
|\ | | | | | | Tested: ummon
| * [svn-r27252] Fix whitespaceAllen Byrne2015-06-191-15/+15
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| * [svn-r27243] fix problem with encoding/decoding external fapl for lapls.Mohamad Chaarawi2015-06-188-25/+41
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| * [svn-r27238] Add function prototype for local functionAllen Byrne2015-06-181-29/+30
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| * [svn-r27237] Description:Quincey Koziol2015-06-1889-12802/+19316
| | | | | | | | | | | | | | | | | | Merge v3 metadata cache changes to trunk. Yay! :-) Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial & parallel (daily tested on branch)
| * [svn-r27216] The comments in this example were incorrect regarding the resultingBarbara Jones2015-06-161-3/+3
| | | | | | | | dataset. They were updated to match the output of the file. (HDFFV-637)
| * [svn-r27207] use "closing" flag instead of always TRUE in the truncate call.Mohamad Chaarawi2015-06-151-1/+1
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| * [svn-r27206] fix for HDFFV-9418. Mohamad Chaarawi2015-06-151-8/+9
| | | | | | | | | | | | | | - Moving truncate to H5F_flush() where it was done a long time ago. - Add a second H5AC_flush() call after the truncate is done to make sure we write the correct EOA. tested with h5committest
| * [svn-r27204] Description:Quincey Koziol2015-06-1522-2158/+1844
| | | | | | | | | | | | | | | | | | Clean up compiler warnings before merging in v3 metadata cache changes from branch. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial & parallel
| * [svn-r27202] Except one file is used by other tests!Allen Byrne2015-06-151-1/+1
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| * [svn-r27201] Changed location of packed bits testfilesAllen Byrne2015-06-151-54/+54
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| * [svn-r27199] Description:Quincey Koziol2015-06-138-2157/+1201
| | | | | | | | | | | | | | | | | | Large code cleanups and optimizations, in preparation for the upcoming v3 metadata cache merge. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial & parallel
| * [svn-r27198] Set "entire_chunk" to false in H5D__chunk_write() for point ↵Vailin Choi2015-06-122-4/+5
| | | | | | | | | | | | selection as duplicate points are not checked to determine that it is really an "entire chunk". The bug appears from running the mdset.c test. This is a short-term fix for the problem.
| * [svn-r27196] Move pbbits file to subfolderAllen Byrne2015-06-1255-137/+137
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* | [svn-r27249] Used versioned APIs to fix the daily tests errors with the ↵Elena Pourmal2015-06-198-24/+24
| | | | | | | | | | | | --with-default-api-version=v16 builds. Tested on jam.
* | [svn-r27248] Daily tests in the VDS brnach reported missing file in ↵Elena Pourmal2015-06-191-0/+1
| | | | | | | | MANIFEST. Fixed.
* | [svn-r27246] Remove "clipped" status from unlimited selections, decoupling ↵Neil Fortner2015-06-188-607/+392
| | | | | | | | | | | | | | | | | | | | | | them from the extent. Improve algorithm for calculation of VDS extent by removing the need for a temporary copy of a dataspace. Other minor fixes/cleanup. Tested: ummon
* | [svn-r27245] Maintenance: Eiger example had wrong printf type of name (had ↵Elena Pourmal2015-06-181-1/+1
| | | | | | | | | | | | dimension number in it). Fixed. Tested on jam.
* | [svn-r27239] Add function prototype for local functionAllen Byrne2015-06-181-29/+30
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* | [svn-r27236] The vds h5diff filesAllen Byrne2015-06-173-0/+29
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* | [svn-r27235] Add vds h5diff testsAllen Byrne2015-06-172-43/+93
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* | [svn-r27234] Add layout test from virtual to Contiguous and Compact ↵Allen Byrne2015-06-171-1/+30
| | | | | | | | generated files to clearall
* | [svn-r27233] Add layout test from virtual to Contiguous and CompactAllen Byrne2015-06-171-35/+85
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* | [svn-r27231] Fix bug in configure that prevented running make.Neil Fortner2015-06-172-2/+2
| | | | | | | | Tested: ummon
* | [svn-r27229] remove copy-paste errors from listAllen Byrne2015-06-172-12/+0
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* | [svn-r27224] Fix bug that prevented reading from datasets with unlimited ↵Neil Fortner2015-06-171-31/+41
| | | | | | | | | | | | | | | | | | | | mappings with missing source datasets. Decided not to attempt to open the source dataset in this case, as doing so could create issues related to the sizing of the VDS. Users should call H5Dget_space to open these datasets. No regression test yet. Tested: ummon
* | [svn-r27220] Maintenance: Added copyrigth; removed read buffer ↵Elena Pourmal2015-06-161-5/+15
| | | | | | | | | | | | initialization since fill value feature works now. Tested on jam.
* | [svn-r27219] Add h5dump and h5 ls VDS test scripts to autools configureAllen Byrne2015-06-166-89/+98
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* | [svn-r27218] Add VDS tests to h5lsAllen Byrne2015-06-1610-1/+503
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* | [svn-r27215] Fix issue where % characters could not be used in non-printf ↵Neil Fortner2015-06-165-74/+174
| | | | | | | | | | | | | | | | mappings. Other minor fixes/cleanup. Tested: ummon
* | [svn-r27214] Fixed a bug on Windows where dcpls were set to be chunked and ↵Dana Robinson2015-06-162-3/+2
| | | | | | | | | | | | | | | | not virtual. This was due to a simple copy-paste issue in the initializer that is used when C99 initializers are not available. Also fixed a dims array size error in the vds test. Tested on: 64-bit Win7 with VS2013
* | [svn-r27197] Improve performance of "printf" VDS with selections in the file ↵Neil Fortner2015-06-124-20/+97
| | | | | | | | | | | | | | | | | | | | space - the library no longer iterates over all source datasets in the printf mapping, it now only looks at the ones that could be involved in I/O (the ones whose bounds overlap with the selection in the unlimited dimension). Tested: ummon
* | [svn-r27195] Add h5dump cmake tests and files.Allen Byrne2015-06-1298-268/+2760
| | | | | | | | | | | | | | Add tools gen cmake files move testfiles for pbits to subdir as well as vds Tested: local linux
* | [svn-r27192] Improve support for printf selections (support partial blocks withNeil Fortner2015-06-128-261/+1108
| | | | | | | | | | | | | | | | | | | | H5_VDS_FIRST_MISSING) Add test for this Rework VDS code to not depend on unlimited selections having a "clipped" state in preparation for removing the clipped state from unlimited selections. Other bug fixes/cleanup Tested: Kubuntu 64 (home computer)
* | [svn-r27191] Merged r26781 to r27185 from trunkDana Robinson2015-06-11224-2087/+2457
|\ \ | |/ | | | | | | Tested on: 64-bit Ubuntu Linux VM w/ gcc 4.8.2 (C++ and Fortran 2003 also tested)
| * [svn-r27185] fix more instances where both mpi is_initialized and ↵Mohamad Chaarawi2015-06-103-88/+96
| | | | | | | | | | | | is_finalized need to be checked before making any MPI calls. tested with h5committest.
| * [svn-r27172] Change disable to skip big test on cygwinAllen Byrne2015-06-092-8/+10
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| * [svn-r27171] Disable big test on cygwinAllen Byrne2015-06-092-24/+29
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| * [svn-r27163] update manifest for newly added file.Mohamad Chaarawi2015-06-081-0/+1
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| * [svn-r27162] fix for HDFFV-9412:Mohamad Chaarawi2015-06-085-20/+112
| | | | | | | | | | | | | | - Check for mpi is_initialized and is_finalized before making MPI calls in init/terminate of HDF5. - Add a test to make sure we can make serial HDF5 calls from rank 0 after MPI_Finalize is called. tested with h5committest
| * [svn-r27159] Snapshot version 1.9 release 221HDF Tester2015-06-0813-24/+24
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