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* [svn-r16271] Bug fix.Albert Cheng2009-01-061-37/+12
| | | | | | | | | The Tail command in jam (a newer linux) does not accept the +2l option. It ended up wiping most of the release_doc/RELEASE.txt file contents. Replaced the "tail +2l" by "sed -e 1d". Tested: Tested in Jam to verify it functions properly again.
* [svn-r16266] Revert RELEASE.txt to the version before it was mostly deleted ↵Neil Fortner2009-01-061-1/+617
| | | | | | | | by hdftest. Update version number listed at the top. Tested: vim
* [svn-r16262] Description:Scot Breitenfeld2009-01-051-1/+1
| | | | | | | | added missing reference in h5lget_name_by_idx_f: !DEC$ATTRIBUTES reference :: for character strings being passed in to C to fix bug in VMS.
* [svn-r16235] Description:Scot Breitenfeld2008-12-301-2/+0
| | | | | | | Cosmetic changes, Also tested -r16231 on: Jam (intel 10.1) Smirom (intel 10.1)
* [svn-r16231] Description:Scot Breitenfeld2008-12-301-1/+4
| | | | Added chunk property to the data set because changes in the cC function H5Dset_extent now require/check that the data set is chunked.
* [svn-r16229] merge 16228Pedro Vicente Nunes2008-12-291-20/+20
| | | | | cleaned more linux warnings tested: linux
* [svn-r16227] cleaned some linux warningsPedro Vicente Nunes2008-12-291-3/+1
| | | | tested: linux
* [svn-r16225] removed some debug messagesPedro Vicente Nunes2008-12-291-18/+0
| | | | tested: windows, linux
* [svn-r16223] Modified H5Dset_extent so that it fails when called for compact ↵Pedro Vicente Nunes2008-12-292-159/+1707
| | | | | | | | datasets and contiguous with no external storage new test program: It adds tests for several ranks, use of fill value or not, compression, different fill value allocation times, use of different storage layouts, and external files tested: windows, linux
* [svn-r16220] Snapshot version 1.9 release 26HDF Tester2008-12-289-678/+34
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* [svn-r16217] Bug fixPedro Vicente Nunes2008-12-236-2016/+2106
| | | | | | | PG compiler complains about array out of bounds (a rank of zero was not checked) Adding a scalar dataset to the test generator program. this case is run on a previous existing run, the case was added to 2 existing files Tested: windows, linux
* [svn-r16214] Added HDlseek to the H5FD_core_truncate function in H5FDcore.c ↵Raymond Lu2008-12-222-1/+8
| | | | | | | | | to rewind the file pointer to the beginning of the file. Otherwise, the file might be re-extended later on Open VMS. Also updated the return value for the HDlseek to be more appropriate. Tested 1.8 on Open VMS.
* [svn-r16209] Purpose:Choonghwan Lee2008-12-193-6/+10
| | | | | | | | | | | | | | Bug fix (#1357) Description: Three filters have not assigned correct value to one value-result argument, "buf_size". N-bit, szip, and scale offset filter have had this problem. However, I don't think this problem has been making buffer overrun because those filters were informing the caller that the "buf", another value-result argument, is smaller than it actually is. If there was actual buffer overrun, I believe another problem exists although I don't know. Tested: jam, smirom, linew Although all test were passed, I'm concerned about valgrind memcheck error. There can be another miscommunication between filter and the caller.
* [svn-r16207] Added new file H5Bdbg.c to windows project file. Will test ↵Allen Byrne2008-12-184-44/+195
| | | | using VS2008 Express.
* [svn-r16204] Description:Quincey Koziol2008-12-186-258/+302
| | | | | | | | | | | | | | | | | | | | | Moved v1 B-tree debugging routines into separate module and thinned out header files a bit. Tested on: Mac OS X/32 10.5.5 (amazon) in debug mode Mac OS X/32 10.5.5 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/Intel compilers w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
* [svn-r16202] Added HDlseek in front of the truncate function in ↵Raymond Lu2008-12-151-1/+7
| | | | | | | | | H5FD_sec2_truncate for VMS only. On Open VMS, if the last read or write put the file pointer beyond the current file size (it happens when an object is deleted), the file can be extended when it's truncated. Tested v1.8 on VMS.
* [svn-r16196] Description:Scot Breitenfeld2008-12-157-6/+32
| | | | | | | | added: !DEC$ATTRIBUTES reference :: for character strings being passed in to C to fix bug in VMS.
* [svn-r16194] Purpose:Mike McGreevy2008-12-154-31/+10
| | | | | | | | | | | | | | | | | | | | | | | Bug Fix Description: Resolved issues with broken sanity checks that were failing when the 'b2' debugging package was enabled (v2 b-tree debugging): - Fixed outdated assertions that would not compile. They now compile and function correctly. - Removed too far outdated assertions that would require too much unnecessary refactoring of code in order to satisfy their initial purpose. - Re-enabled b2 debugging package when "--enable-debug=all" is specified on the configure line. Tested: jam, smirom, linew
* [svn-r16189] Changed references of H5Distore to H5Dbtree in project files. ↵Allen Byrne2008-12-124-4/+4
| | | | (Related to revision 16180)
* [svn-r16187] Description:Quincey Koziol2008-12-113-4/+4
| | | | | | | Change a few more "istore" references in comments to "chunk" or "btree". Tested on: None, just comments
* [svn-r16182] Description:Quincey Koziol2008-12-1115-401/+396
| | | | | | | | | | | | | | | | | | | | | | Rename internal routines, variables, macros, typedefs, etc. for chunked dataset storage from "istore" to some variant of "chunk" or "btree". Tested on: Mac OS X/32 10.5.5 (amazon) in debug mode Mac OS X/32 10.5.5 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/Intel compilers w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode
* [svn-r16180] Description:Quincey Koziol2008-12-114-6/+6
| | | | | | | | | | Rename the current chunk indexing routines module for B-tree indices to better reflect their purpose, and to make the upcoming extensible array index module fit in better. Tested: FreeBSD/32 6.3 Too minor to require h5committest
* [svn-r16179] Description:Quincey Koziol2008-12-111-2/+2
| | | | | | | | Use the H5F_KVALUE macro in a couple more places, to make the code easier to read. Tested on: Mac OS X only (very minor)
* [svn-r16176] Remove terminal whitespace in links.c, H5Lexternal.c, H5Pfapl.cNeil Fortner2008-12-093-29/+29
| | | | Tested: jam
* [svn-r16173] Updated fix of the missing argument of open() in zip_perf.c.Albert Cheng2008-12-091-0/+2
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* [svn-r16170] Code clean up.Albert Cheng2008-12-091-13/+12
| | | | | | | Function get_unique_name() had potential string overflow problem. Fixed. Also removed some unused macros. Tested by h5committest.
* [svn-r16167] Bug fix: 1089Albert Cheng2008-12-091-3/+3
| | | | | | | | | | | | Description: One open() call with O_CREAT flag did not have the third required argument. Solution: Added the right third argument. Also changed all open() calls to HDopen macros for more portable coding. Tested: h5committested.
* [svn-r16166] Description:Frank Baker2008-12-081-6/+6
| | | | Change all occurrences of 'THG' to 'The HDF Group'.
* [svn-r16161] Purpose: Add new source file to WindowsScott Wegner2008-12-052-0/+8
| | | | | | | | | | Description: Recently the new source file H5EAdbkpage.c was added to the main library source code. This checkin also adds it to the Windows project files. Note: Windows builds are still failing on the earray test, although for other reasons. I'm also looking into this. Tested: VS2005 on WinXP
* [svn-r16158] Test the non deletion of a chunk for the case chunk_offset == ↵Pedro Vicente Nunes2008-12-041-2/+240
| | | | | | dimension by shrinking first, then expanding to original size and compare buffers of initialized values Tested: windows, linux
* [svn-r16156] close & re-open the file for the test of non-default B-tree ↵Pedro Vicente Nunes2008-12-041-0/+29
| | | | | | | internal 'K' value (There was a bug where a non-default B-tree internal 'K' value was not being stored in the file) this is a rewrite of the old set_extent.c test program tested: windows, linux
* [svn-r16152] added comments and removed unnecessary codePedro Vicente Nunes2008-12-021-16/+63
| | | | tested: windows, linux
* [svn-r16150] Change a call to H5FL_fac_free to H5FL_FAC_FREE so it works ↵Neil Fortner2008-12-021-1/+1
| | | | | | | | correctly when free lists are disabled. Tested: jam
* [svn-r16148] reorganized the set_extent test to be more modularPedro Vicente Nunes2008-12-021-83/+116
| | | | tested: windows, linux
* [svn-r16144] Removed the check of H5Dset_extent for the space to be ↵Pedro Vicente Nunes2008-12-012-4/+12
| | | | | | chunked, since external datasets can be extended Tested: windows, linux
* [svn-r16143] add a test for recent fixes of H5Dset_extentPedro Vicente Nunes2008-12-011-625/+541
| | | | tested: windows, linux
* [svn-r16142] Added a check to H5Dset_extent for the space to be chunked, ↵Pedro Vicente Nunes2008-12-012-19/+11
| | | | | | | | exit with error otherwise A call to H5Dset_extent in the external test was removed Tested: windows, linux
* [svn-r16138] Snapshot version 1.9 release 25HDF Tester2008-11-309-24/+24
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* [svn-r16137] Description:Quincey Koziol2008-11-2818-145/+1092
| | | | | | | | | | | | | | | | | | | | | | | | | | Add support for paging large data blocks to extensible arrays Clean up allocation/destroy code for extensible array index, super and data blocks Add a couple of routines to set/get bit values in memory buffers Tested on: Mac OS X/32 10.5.5 (amazon) in debug mode Mac OS X/32 10.5.5 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/Intel compilers w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode
* [svn-r16133] H5TBdelete_record was not handlong correctly records at the end ↵Pedro Vicente Nunes2008-11-252-56/+90
| | | | | | | | of the table added a ckeck that avoids to read these records if they are not needed (for pushing down the table) tested: windows, linux
* [svn-r16132] some chunks were not deleted for some cases, the comparison to ↵Pedro Vicente Nunes2008-11-251-1/+1
| | | | | | | | | | check for chunk offsets outside of the new dimensions was chunk_offset[ i ] > dimension [ i ] and it must be chunk_offset[ i ] >= dimension [ i ] tested: windows, linux
* [svn-r16128] revised test tablePedro Vicente Nunes2008-11-241-1476/+1486
| | | | tested windows linux
* [svn-r16125] add mention to Table changePedro Vicente Nunes2008-11-241-0/+2
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* [svn-r16124] In version 3.0 of Table, "NROWS" was deprecatedPedro Vicente Nunes2008-11-243-2991/+2879
| | | | tested: windows, linux
* [svn-r16121] Snapshot version 1.9 release 24HDF Tester2008-11-239-23/+23
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* [svn-r16119] h5repack: Define a default chunk whose size is manageable. (PVN ↵Pedro Vicente Nunes2008-11-211-0/+2
| | | | - 2008/11/21)
* [svn-r16114] remove commented codePedro Vicente Nunes2008-11-211-13/+0
| | | | tested: windows, linux
* [svn-r16112] #1375. Define a default chunk whose size is manageable. Defined ↵Pedro Vicente Nunes2008-11-213-13/+55
| | | | | | currently as the same size of hyperslab (that compares the dimension sizes against a predefined constant size and chooses the minimum between the two) Tested : linux, windows
* [svn-r16110] VMS maintenance: Brought command files up-to-dateElena Pourmal2008-11-192-2/+13
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* [svn-r16107] Maintenance: Brought up command file up-to-date.Elena Pourmal2008-11-191-7/+7
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