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* [svn-r9250] Purpose:Quincey Koziol2004-09-146-20/+20
| | | | | | | | | | | | | | | | | | | | Bug fix Description: Correct typedef for dataset region references to avoid struct alignment issues on Crays. Solution: Change the typedef for hdset_reg_ref_t from a struct to an array of unsigned char's of the correct size and propagate the appropriate adjustments around the code. Platforms tested: FreeBSD 4.10 (sleipnir) Linux 2.4 (verbena) w/fortran Cray T90 (subzero) w/fortran Cray SV1 (wind) w/fortran & parallel Cray T3E (cyclone) w/fortran & parallel
* [svn-r9243] Snapshot version 1.7 release 37HDF Admin2004-09-127-16/+20
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* [svn-r9239] Purpose:Xuan Bai2004-09-101-0/+0
| | | | | | | | | | | | | | | Bug fix. Description: Last time, I renamed the SZIP-encode-checking environment variable from H5_SZIP_CAN_ENCODE to HDF5_SZIP_ENCODE. But I forgot to update the repacktest.bat batch file. This time, repacktest.bat is updated. Solution: Platforms tested: Not necessary. (Already tested with Visual C++ 6.0 on XP, but forgot to update it into all.zip last time). Misc. update:
* [svn-r9234] Purpose:Quincey Koziol2004-09-0916-147/+192
| | | | | | | | | | | | | | | | | | | | | | | Code cleanup Description: Tweak recent "forward compatibility" changes to the H5E* API (which allowed for the old H5E API functions to remain unchanged) by allowing for the error stack callback function (H5E_auto_t) to also remain unchanged from the 1.6 branch. This required changing the H5E{get|set}_auto routines to have the old style H5E_auto_t type (which didn't have a stack ID parameter) and the new H5E{get|set}_auto_stack routines to have a newer "H5E_auto_stack_t" type (which has a stack ID parameter). This should make the H5E API changes as forwardly compatible as possible. One side-affect of this change was that it was impossible to determine if the current auto error callback was the old style (H5E_auto_t) or the new style (H5E_auto_stack_t) of callback, so a new API function (H5Eauto_is_stack) was adde to query this. Platforms tested: FreeBSD 4.10 (sleipnir) IRIX64 6.5 (modi4) h5committest
* [svn-r9231] Frank Baker2004-09-081-4/+4
| | | | | | | | | Description: H5T_conv_t (appears in H5Tregister description) -- changed datatype of the nelmts parameter H5Tconvert -- changed datatype of the nelmts parameter Platforms tested: Mozilla
* [svn-r9229] Purpose:Xuan Bai2004-09-081-0/+0
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | New feature and Update. Description: 1. Updated installhdf5lib.bat file so that libtest_fortran.lib and libtest_fortrand.lib will NOT be installed; 2. Updated the project settings for projects in HDF5 C examples: To be consistant with other HDF5 windows project settings: 1) replaced zlib.lib in Object/library modules with environment variable HDF5_EXT_ZLIB 2) replaced szlib.lib in Object/library modules with environment variable HDF5_EXT_SZIP Also, to prevent the compiler from failing to find hdf5.lib/hdf5d.lib when HDF5 library has been removed from the original folders, added the installed library hdf5lib path in the Additional library path. 3. Added a new batch file testExamples.bat under hdf5\examples directory for the purpose of testing HDF5 C examples. An expected C examples tests output file testExample_exp_output.txt was aslo added. 4. h5repack testing batch file repacktest.bat has a minor bug. This minor bug causes some HDF5 repack testing failures when only gzip is disabled. The failure reasons is that we only checked whether szip or szip encoder is enabled for the following two tests: h5repack test_deflate.h5 -f dset_deflate:SZIP=8,NN h5repack test_szip.h5 -f dset_szip:GZIP=1 These two tests should also be skipped when gzip is disabled. 5. As HDF5 Fortran DLL does not work with DEC Fortran 6.0, so we do not need to build HDF5 Fortran DLL related projects anymore. Solution: Added Checking whether gzip is disabled for the above two h5repack tests. If gzip is disabled, skip these tests. Modified hdf5build.bat batch file so HDF5 Fortran DLL related projects will not be built. Platforms tested: installhdf5lib.bat, hdf5build.bat, repacktest.bat and testExamples.bat batch files are same in branch 1.6 and 1.7. These batch files have already been tested in branch 1.6. So it is not necessary to test for branch 1.7 again. For the HDF5 C examples, tested in Visual C++ 6.0 in Windows XP. Misc. update:
* [svn-r9224] Frank Baker2004-09-081-2/+12
| | | | | | | Purpose: Add h5iget_file_id_f Platforms tested: Mozilla
* [svn-r9221] Purpose: Bug fixRaymond Lu2004-09-081-1/+1
| | | | | | | | Description: One place was left out for update after the Error API was modified. Changed it from H5Eset_auto to H5Eset_auto_stack. Platforms tested: sleipnir(with threadsafe) - simple change.
* [svn-r9220] Purpose:John Mainzer2004-09-071-2/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | Fix configure bug that appears on SDSC DataStar. Description: Two cached "sizeof"s in ./config/powerpc-ibm-aix5.x cause builds on SDSC Datastar to choke. Solution: Commented out the offending "sizeof"s. Included comments indicating the reason for the change. Platforms tested: copper Misc. update: n/a
* [svn-r9218] Purpose:Pedro Vicente Nunes2004-09-071-12/+16
| | | | | | | | | | | | | | | | | | bug fix Description: The H5O_mtime_decode function was not handling properly the case for the Code Warrior compiler Solution: Platforms tested: Code Warrior Misc. update:
* [svn-r9215] Purpose:Pedro Vicente Nunes2004-09-071-0/+4
| | | | | | | | | | | | added a nore about the get_native_integer Description: Solution: Platforms tested: Misc. update:
* [svn-r9213] Purpose:Pedro Vicente Nunes2004-09-071-1/+206
| | | | | | | | | | | | | | | | | | | | | | | | | new test for the native types test Description: on the Cray SV1 an INT type was wrongly converted to a SHORT type by the get_native_integer function Choose the type based on the precision; this is to support cases like the Cray SV1, where the size of short is 8 but precision is 32 (e.g an INT (size 8, prec 64) would be converted to a SHORT (size 8, prec 32) if the size was the deciding factor) Solution: Platforms tested: linux solaris aix Misc. update:
* [svn-r9212] Purpose:Pedro Vicente Nunes2004-09-071-77/+86
| | | | | | | | | | | | | | | | | | | | | | | | | bug fix Description: on the Cray SV1 an INT type was wrongly converted to a SHORT type by the get_native_integer function Choose the type based on the precision; this is to support cases like the Cray SV1, where the size of short is 8 but precision is 32 (e.g an INT (size 8, prec 64) would be converted to a SHORT (size 8, prec 32) if the size was the deciding factor) Solution: Platforms tested: linux solaris aix Misc. update:
* [svn-r9209] Snapshot version 1.7 release 36HDF Admin2004-09-056-15/+24
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* [svn-r9208] Purpose: Bug fixRaymond Lu2004-09-046-9/+28
| | | | | | | | Description: A few items were left out when tried to restore the old Error API. There are also a few minor bug fixes. Platforms tested: arabica fuss h5committest.
* [svn-r9204] Purpose:Pedro Vicente Nunes2004-09-031-118/+6
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | bug fix changed some datset names for h5repack etsts Description: Description: the dataset region reference data was not portable between the Cray T3E and other machines Solution: this was due to the fact that the buffer to store the heap ID and index was using a sizeof(int) for its size 4 is used instead of sizeof(int) to permit portability between the Crays and other machines (the heap ID is always encoded as an int32 anyway) Solution: Platforms tested: linux aix solaris Misc. update:
* [svn-r9203] Purpose:Pedro Vicente Nunes2004-09-031-2/+5
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | bug fix Description: Description: the dataset region reference data was not portable between the Cray T3E and other machines Solution: this was due to the fact that the buffer to store the heap ID and index was using a sizeof(int) for its size 4 is used instead of sizeof(int) to permit portability between the Crays and other machines (the heap ID is always encoded as an int32 anyway) Solution: Platforms tested: linux aix solaris Misc. update:
* [svn-r9200] MuQun Yang2004-09-031-10/+7
| | | | | | | | | | | | | | | | | | | Purpose: Shrink HDF5 parallel test Description: Previously the collective chunk IO tests created and opened four HDF5 files; it turned out that all collective chunk IO tests can use one file for testing. Solution: To use one file for all collective chunk IO tests with trunc option to be set in H5Fcreate. Platforms tested: copper(no need to use h5committest) Misc. update:
* [svn-r9198] Purpose:Pedro Vicente Nunes2004-09-031-0/+0
| | | | | | | | | | | | | | inserted new code warrior project Description: Solution: Platforms tested: Misc. update:
* [svn-r9197] Purpose:MuQun Yang2004-09-031-0/+0
| | | | | | | | | | | | | | Code warrior support erased previous change of object settings, we need to resume the old change. Description: Xuan checked in the recent change for windows settings(many of them) on Sep. 1st and it was wiped out by code warrior support that used the old all.zip modified on Aug. 27th. In order to maintain the release for windows, we have to resume it. Solution: Platforms tested: Misc. update:
* [svn-r9192] Frank Baker2004-09-021-12/+132
| | | | | | | | Purpose: Add H5Zget_filter_info and h5zget_filter_info_f. Other minor edits. Platforms tested: Mozilla
* [svn-r9191] Purpose:Pedro Vicente Nunes2004-09-021-0/+0
| | | | | | | | | | | | | added a new project file for CodeWarrior (the files in the library changed since the last version ) Description: Solution: Platforms tested: Misc. update:
* [svn-r9187] Purpose:Xuan Bai2004-09-011-0/+0
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | New feature. Description: Before this update, we use per_hdf_library convention to set environment variables for gzip and szip compression libraries, for example, HDF5_EXT_LIBS = zlib.lib szlib.lib. As some of HDF5 dump and repack tests should be skipped when gzip/szip are disabled. But we found it was very complicated to check whether gzip/szip were disabled in Windows with the per_hdf_library convention. Using per_external_library naming convention makes the checking much easier. So we decide to convert to per_external_library naming convention. A new environment variable H5_SZIP_CAN_ENCODE is added to check whether szip encoding is enabled. dumptest.bat and repacktest.bat batch files are also updated so these tests which use gzip/szip filters will be skipped when gzip/szip are disabled and will be tested when gzip/szip are enabled. Solution: Now we should set the following environment variables: HDF5_EXT_ZLIB = zlib.lib HDF5_EXT_SZIP = szlib.lib HDF5_EXT_ZLIB_DLL = c:\zlib114\dll\zlib.lib HDF5_EXT_SZIP_DLL = szlibdll.lib when we want to enable gzip/szip. Set H5_SZIP_CAN_ENCODE as 1 when szip encoding is enabled and as 0 when szip encoding is disabled. Platforms tested: Visual C++ 6.0 on Windows 2000/XP. (Will test with .NET after this check-in). Misc. update:
* [svn-r9183] Purpose: New featureRaymond Lu2004-09-0142-806/+305
| | | | | | | | | | | | Description: Restore 6 old error API functions back to the library to be backward compatible with v1.6. They are H5Epush, H5Eprint, H5Ewalk, H5Eclear, H5Eset_auto, H5Eget_auto. These functions do not have error stack as parameter. Solution: Internally, these functions use default error stack. Platforms tested: h5committest and fuss. Misc. update: RELEASE.txt
* [svn-r9179] Purpose:Albert Cheng2004-09-011-24/+24
| | | | | | | | | | | | | Text display change Description: Changed the test names to much shorter strings for easier use. Platforms tested: No h5committed test. Only test parallel in eirene. Misc. update:
* [svn-r9173] Purpose:Xuan Bai2004-08-271-0/+0
| | | | | | | | | | | | | | | Bug fix. Description: There was a minor bug in the hdf5check.bat I checked in last night. We should check check_results.txt (not hdf5_results.txt) to find out whether there are any failed tests. Solution: Change hdf5_results.txt to check_results.txt. Platforms tested: Minor fix, Kent tested the fix on Windows XP. Misc. update:
* [svn-r9172] Purpose:Albert Cheng2004-08-271-2/+2
| | | | | | | | | | | | | | | | | | | | | "bug fix" sort of. Description: The current mpicc at TG-NCSA recognizes uint64_t but not int64_t. hdf5 code rightly assumes when the unsigned type is defined, the corresponding signed type should be valid too. So, when it detected uint64_t is valid, it went ahead using int64_t which ended in compiling failure. Solution: Changed the detection to check on int64_t instead. This does not change any logic, just goes around the mpicc compiler error at TG-NCSA. Platforms tested: h5committested and tested at TG-NCSA (pp) too. Misc. update:
* [svn-r9168] Purpose:Xuan Bai2004-08-271-0/+0
| | | | | | | | | | | | | | | Update. Description: Add HDF5 timing tests into hdf5check.bat batch file. hdf5check.bat batch file will generate a new file tests_results under HDF5 directory to dispaly whether all HDF5 tests passed or not, if failed, which tests failed (the check_results.txt which includes detailed HDF5 libraries and tools tests results will also be generated at the same time). Solution: Platforms tested: Windows 2000/XP. Misc. update:
* [svn-r9164] Frank Baker2004-08-261-2/+2
| | | | | | | Purpose: H5Pset_fapl_multi -- syntax has changed in (one parameter datatype) Platforms tested: Mozilla
* [svn-r9162] Purpose:Albert Cheng2004-08-261-4/+19
| | | | | | | | | | | | | | | | | | | | | Bug fix. Description: $CXX_BASENAME was not set yet if $CXX was pre-set to g++. In turn, CXX_flags are not picking up the g++ values. Solution: The correct solution should be done in configure which should have setup CXX_BASENAME if $CC is set before sourcing this file. Put a special patch here for g++ for now. (Also added the recognization of icc as another name for Intel compilers.) Platforms tested: No h5committest but tested in TG-NCSA since these changes affected the IA64 platform only. Misc. update:
* [svn-r9161] Frank Baker2004-08-261-50/+63
| | | | | | | | | | | | | | | | | | | Purpose: Revise H5Premove_filter H5Pset_chunk bug fix Correct H5Premove signature Formatting fix Description: H5Premove_filter -- editorial and technical revisions replaced F90 description H5Pset_chunk -- specified units of chunk size as "dataset elements" fixes Bugzilla #110 H5Premove -- corrected signature, removing duplicate mention of parameters Corrected "electronic versus print" formatting error in functions index Platforms tested: Mozilla Misc. update:
* [svn-r9158] Purpose:Xuan Bai2004-08-261-0/+0
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | New feature. Description: Before this update, to link HDF5 with zlib and szip libraries and DLLs, zlib.lib szlib.lib were added into Object/library modules in more than 50 windows projects settings; c:\zlib114\dll\zlib.lib szlibdll.lib were added into Object/library modules in hdf5dll project settings. With the above settings, if we want to disable zlib and/or szip libraries and DLLs from HDF5, we have to remove zlib.lib szlib.lib from Object/library modules in more than 50 projects settings; c:\zlib114\dll\zlib.lib szlibdll.lib also need to remove from hdf5dll project settings. The above operations should be done for both release and debug versions. So it is really very unconvenient to disable zlib and/or szip libraries and DLLs. Solution: Add HDF5_EXT_LIBS environment variable and replace zlib.lib szlib.lib in Object/library modules with $(HDF5_EXT_LIBS) Add HDF5_EXT_LIBS_DLL environment variable and replace c:\zlib114\dll\zlib.lib szlibdll.lib in Oject/library modules with $(HDF5_EXT_LIBS_DLL). If we want to enable both zlib and szip, set HDF5_EXT_LIBS = zlib.lib szlib.lib HDF5_EXT_LIBS_DLL = c:\zlib114\dll\zlib.lib szlibdll.lib If we want to enable zlib and disable szip, set HDF5_EXT_LIBS = zlib.lib HDF5_EXT_LIBS_DLL = c:\zlib114\dll\zlib.lib If we want to disable zlib and enable szip, set HDF5_EXT_LIBS = szlib.lib HDF5_EXT_LIBS_DLL = szlibdll.lib If we want to disable both zlib and szip, set HDF5_EXT_LIBS = HDF5_EXT_LIBS_DLL = Platforms tested: Tested with Microsoft Visual C++ 6.0/DEC Fortran 6.0 and .NET on Windows XP and Visual C++ 6.0/DEC Fortran 6.0 on Windows 2000 for all the possible 4 zlib/szip enable/disable combinations: 1. Enable both 2. Enable zlib and disable szip 3. Disable zlib and enable szip 4. Disable both Misc. update:
* [svn-r9155] Purpose:Quincey Koziol2004-08-254-9/+196
| | | | | | | | | | | | | | | Bug fix (sorta) Description: Change reading of "missing" chunks from datasets with undefined fill values to not overwrite the application buffer with random garbage from memory. Note that this is almost the same, since whatever garbage the application had in those locations will still be there... Platforms tested: FreeBSD 4.10 (sleipnir) IRIX64 6.5 (modi4) h5committested
* [svn-r9154] Elena Pourmal2004-08-259-6/+109
| | | | | | | | | | | | Purpose: Maintenance/bug fixes (OSF1 C++ and missing Fortran APIs) Description: bringing 1.6 changes to 1.7 Solution: Platforms tested: OSF1, Solaris 2.8, AIX5.1 Misc. update:
* [svn-r9149] Purpose:John Mainzer2004-08-241-90/+282
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Fix of bug/feature which caused testphdf5 to fail when run with more than 32 processes. This fix was originally applied to the 1.6 branch, and is now ported to the 1.7 branch. Description: 32 process limit was a hard coded constant. Solution: Modified most of the routines in t_mdset.c to adapt dynamically to the current number of processes. In passing, I also tidied up a few memory leaks. Note that one new routine had been added to the 1.7 version of t_mdset.c since the 1.6/1.7 split. I applied changes to this routine as well. Platforms tested: h5committested Tested on eirene with 4 and 8 processes. Couldn't go higher. I would have like to repeat my 32 - 64 process tests on copper, but was unable to do so as I don't have access to cu12t at present. Perhaps I will be able to manage this in the next few days. However, Albert wanted these changes checked in to the 1.7 branch so he could work with them. Misc. update:
* [svn-r9148] Frank Baker2004-08-241-36/+46
| | | | | | | | Purpose: Heavy edit to existing H5Iget_file_id entry Restructure function index at top of page Platforms tested: Mozilla
* [svn-r9146] Purpose:Pedro Vicente Nunes2004-08-2412-38/+22
| | | | | | | | | | | | | | | | | | | h5repack test Description: modified a test file generation contents, for more easy debugging (generated just one reference dataset and one region reference ) Solution: Platforms tested: linux aix solaris Misc. update:
* [svn-r9143] Frank Baker2004-08-241-7/+143
| | | | | | | | | Purpose: Add H5Fget_name Add H5Fget_filesize Minor correction in HTML coding of H5Fget_freespace Platforms tested: Mozilla
* [svn-r9141] Purpose:Albert Cheng2004-08-242-72/+30
| | | | | | | | | | | Code cleanup. Removed bunch of old options (r,w,v,i,b,e) that are no longer valid or useful after adopting the general test interface. Moved the test of sizeof MPI_Offset into the test routine itself. Platforms tested: Eirene and Sol using pp mode.
* [svn-r9139] Purpose:Albert Cheng2004-08-231-1/+5
| | | | | | | | | | | | | | | Bug fix. Description: The return value of TestPrivateParser() was not tested, thus program would keep on going incorrectly even if errors were detected in TestPrivateParser. Solution: Check the return and exit accordingly. Platforms tested: Tested in Eirene and Sol in both serial and pp modes.
* [svn-r9137] Purpose:Pedro Vicente Nunes2004-08-236-30/+92
| | | | | | | | | | | | | | | | | | new test Description: added a test that generates and copies a file with a dataset with fill value (this is to test the property list function H5Pequal) Solution: Platforms tested: linux solaris aix Misc. update:
* [svn-r9134] Snapshot version 1.7 release 35HDF Admin2004-08-226-15/+18
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* [svn-r9133] Purpose: Clean up codeBinh-Minh Ribler2004-08-214-31/+1
| | | | | | | | | | | Description: The private function p_close was removed previously, but I inadvertently put it back in a few places, while transferring the changes from 1.6 branch. These are removed now. Platforms tested: SunOS 5.7 (arabica) Linux 2.4 (eirene)
* [svn-r9130] Purpose:Albert Cheng2004-08-202-32/+67
| | | | | | | | | | | | | | | | | | | | | bug fix. Description: The test routines only print error messages but not all of them return number of errors detected back to the main routine which always exit with a 0 status. Thus make or shell commands could not detect there were errors. Solution: Changed the test routines to return appropriate number of errors to main routine which in turn exit with the appropriate exit code if errors found. Platforms tested: Tested in Sol and eirene (pp). Misc. update:
* [svn-r9129] Purpose: Updating documentationBinh-Minh Ribler2004-08-2038-688/+843
| | | | | | | | | | Description: Updated various function headers for the RM as reviewing progresses. Rearranged functions in header files for more sensible look of the RM. Platforms tested: SunOS 5.7 (arabica) Linux 2.4 (eirene)
* [svn-r9128] Purpose: Code updatingBinh-Minh Ribler2004-08-202-109/+104
| | | | | | | | | Description: Renamed some private members and member functions appropriately. Platforms tested: SunOS 5.7 (arabica) Linux 2.4 (eirene)
* [svn-r9127] Purpose: Adding wrapper for new C API and other updatesBinh-Minh Ribler2004-08-208-167/+356
| | | | | | | | | | | | | Description: Added wrappers for H5Fget_name: H5File::getFileName H5Object::getFileName Moved some functions from Group into the base class CommonFG for H5File too. Platforms tested: SunOS 5.7 (arabica) Linux 2.4 (eirene)
* [svn-r9126] Purpose: Updating RMBinh-Minh Ribler2004-08-201-8/+29
| | | | | | | | | | Description Added the rest of the C++ examples to the RM. Platforms tested: Verified on Windows Misc. update:
* [svn-r9124] Purpose: MaintenanceElena Pourmal2004-08-202-0/+17
| | | | | | | | | | | Description: Added PGI Fortran support for Linux64 systems (x86_64) Solution: Platforms tested: AMD Opteron box at AMD Sunnyvale and verbena with PGI and gcc compilers. Misc. update:
* [svn-r9122] Purpose:Xuan Bai2004-08-191-0/+0
| | | | | | | | | | | | | | Update. Description: Minor update on hdf5check.bat. Solution: Platforms tested: Windows 2000/XP. Misc. update:
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