Commit message (Collapse) | Author | Age | Files | Lines | |
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* | [svn-r26567] h5dump was nopt displaying source selection correctly due to a ↵ | Elena Pourmal | 2015-03-24 | 1 | -1/+1 |
| | | | | type; fixed. | ||||
* | [svn-r26566] Fix error in H5S__hyper_project_intersection algorithm. | Neil Fortner | 2015-03-24 | 2 | -6/+171 |
| | | | | | | | | Note there are still some code coverage assertions in the selection matching algorithm - if you hit these try taking them out. Note make check still fails in h5dump test (unrelated to this checkin). Tested: ummon | ||||
* | [svn-r26565] Since fill values for VDS do not work at this point initialized ↵ | Elena Pourmal | 2015-03-24 | 1 | -0/+5 |
| | | | | | | | | the read buffer to show that VDS data is read correctly, leaving unmapped data untouched. Tested on jam. | ||||
* | [svn-r26564] Modified related files after adding example/h5_vds-percival.c | Elena Pourmal | 2015-03-24 | 5 | -4/+13 |
| | | | | Tested on jam. | ||||
* | [svn-r26563] Added new percival example to MANFEST. | Elena Pourmal | 2015-03-24 | 1 | -0/+1 |
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* | [svn-r26562] Added examples for percival use case. | Elena Pourmal | 2015-03-24 | 1 | -0/+245 |
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* | [svn-r26559] Fix error in H5S_extent_copy (needs testing) - would not patch ↵ | Neil Fortner | 2015-03-24 | 2 | -4/+14 |
| | | | | | | | | | | | | number of elements selected with "all" slections nor reset sharing state. Fix error in H5S__hyper_project_intersection algorithm. Note there are still some code coverage assertions in the selection matching algorithm - if you hit these try taking them out. Note make check still fails in h5dump test (unrelated to this checkin). Tested: ummon | ||||
* | [svn-r26557] Removed commented VDS read code. tested on jam. | Elena Pourmal | 2015-03-24 | 1 | -2/+0 |
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* | [svn-r26482] Opening source files now reuses the flags from the virtual file. | Neil Fortner | 2015-03-19 | 3 | -9/+33 |
| | | | | | | | | | Added tests for I/O on virtual dataset with source datasets in unopened files. Note there are still some code coverage assertions in the selection matching algorithm - if you hit these try taking them out. Note make check still fails in h5dump test (unrelated to this checkin). Tested: ummon | ||||
* | [svn-r26476] Add support for I/O in all cases with fixed size datasets and ↵ | Neil Fortner | 2015-03-18 | 8 | -151/+279 |
| | | | | | | | | | | | | | no point selections. Add source dataspace extent patching (should allow closing the source file). Note fill values and various other features are not yet supported. Note there are still some code coverage assertions in the selection matching algorithm - if you hit these try taking them out. Note make check still fails in h5dump test (unrelated to this checkin). Tested: ummon | ||||
* | [svn-r26469] INCOMPLETE, UNWORKING CODE | Neil Fortner | 2015-03-17 | 9 | -86/+535 |
| | | | | Commit progress through 3/17/15 | ||||
* | [svn-r26442] Removed blank line and fixed ALL output | Allen Byrne | 2015-03-12 | 1 | -12/+30 |
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* | [svn-r26440] Added new structure, removed ";", used static hyperslab arrays. | Allen Byrne | 2015-03-12 | 3 | -30/+48 |
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* | [svn-r26431] Add new example (reorder to match closer to makefile) | Allen Byrne | 2015-03-11 | 1 | -12/+13 |
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* | [svn-r26421] This is Neils' change exposed when I ran bin/reconfigure for ↵ | Elena Pourmal | 2015-03-10 | 1 | -1/+1 |
| | | | | examples. | ||||
* | [svn-r26420] Added new example for simple I/O. Modified other examples ↵ | Elena Pourmal | 2015-03-10 | 9 | -31/+229 |
| | | | | according to the suggestion in H5VDS-7 (see VDS-178) | ||||
* | [svn-r26418] Fix initial indent for selection_all | Allen Byrne | 2015-03-10 | 1 | -0/+3 |
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* | [svn-r26411] Add support for I/O in very simple cases (virtual mapping and ↵ | Neil Fortner | 2015-03-09 | 10 | -58/+626 |
| | | | | | | | | | file space are both H5S_ALL). Note make check fails in h5dump test (unrelated to this checkin). Tested: ummon | ||||
* | [svn-r26383] Add MAPPING to VDS output | Allen Byrne | 2015-03-06 | 2 | -1/+2 |
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* | [svn-r26376] Added new examples for fixed-size Excalibur and for Eiger use ↵ | Elena Pourmal | 2015-03-05 | 8 | -25/+437 |
| | | | | | | cases. Fixed several typos. Tested on jam. | ||||
* | [svn-r26361] Added check for unlimited to count/block print selection | Allen Byrne | 2015-03-04 | 1 | -4/+12 |
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* | [svn-r26360] Modified CMake files to accomodate new h5_vds-exc.c example. | Elena Pourmal | 2015-03-04 | 2 | -0/+3 |
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* | [svn-r26359] Added h5_vds-exc.c to misc. files and ran bin/reconfigure. | Elena Pourmal | 2015-03-04 | 4 | -6/+11 |
| | | | | Tested on jam. | ||||
* | [svn-r26357] Added mapping example for the Excalibur detector use case. | Elena Pourmal | 2015-03-04 | 1 | -0/+212 |
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* | [svn-r26353] Add VDS selection defines for ALL and NONE | Allen Byrne | 2015-03-04 | 2 | -2/+4 |
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* | [svn-r26352] Update h5dump to latest BNF - reg vs irreg hyperslabs. | Allen Byrne | 2015-03-04 | 4 | -13/+96 |
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* | [svn-r26346] Add more test cases, refactor test code to reduce code ↵ | Neil Fortner | 2015-03-03 | 3 | -105/+617 |
| | | | | | | | | | duplication. Minor fixes in src. Note make check still fails in h5ls test. Tested: ummon | ||||
* | [svn-r26343] Improved output. | Elena Pourmal | 2015-03-02 | 1 | -4/+4 |
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* | [svn-r26342] Added usage of the new H5S*_regular_hyperslab functions. | Elena Pourmal | 2015-03-02 | 1 | -0/+12 |
| | | | | Tested on jam. | ||||
* | [svn-r26318] Update virtual layout to latest changes | Allen Byrne | 2015-02-26 | 3 | -299/+261 |
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* | [svn-r26306] Merge r26296 through 26304 from trunk to vds branch. | Neil Fortner | 2015-02-25 | 52 | -99/+470 |
|\ | | | | | | | | | | | | | It should no longer be necessary to use --enable-using-memchecker make check fails due to an issue with h5ls apparently unrelated to the merge Tested: ummon | ||||
| * | [svn-r26303] remove files with .clog2 extension generated by MPE when doing ↵ | Mohamad Chaarawi | 2015-02-25 | 42 | -92/+94 |
| | | | | | | | | make clean. | ||||
| * | [svn-r26302] Description: | Quincey Koziol | 2015-02-25 | 9 | -121/+190 |
| | | | | | | | | | | | | | | | | | | Revise dataspace encode/decode routines to make them work better with future virtual dataset feature. Tested on: Mac OSX/64 10.10.2 (amazon) w/serial (h5committest forthcoming) | ||||
| * | [svn-r26301] Description: | Quincey Koziol | 2015-02-25 | 3 | -3/+99 |
| | | | | | | | | | | | | | | | | Bring Neil's fix for error in H5S_extent_copy() back to the trunk. Tested on: Mac OSX/64 10.10.2 (amazon) w/serial (h5committest forthcoming) | ||||
| * | [svn-r26300] Description: | Quincey Koziol | 2015-02-25 | 3 | -0/+272 |
| | | | | | | | | | | | | | | | | | | Add H5Sis_regular_hyperslab() and H5Sget_regular_hyperslab() API routines, along with tests. Tested on: Mac OSX/64 10.10.2 (amazon) w/serial (h5committest forthcoming) | ||||
* | | [svn-r26297] Changed example and h5dump according to suggestions at today's ↵ | Elena Pourmal | 2015-02-25 | 5 | -27/+32 |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | code review VDS-176. BNF has been updated too. Now h5dump displays VDS like this: HDF5 "vds.h5" { GROUP "/" { DATASET "VDS" { DATATYPE H5T_STD_I32LE DATASPACE SIMPLE { ( 4, 6 ) / ( 4, 6 ) } STORAGE_LAYOUT { VIRTUAL { HYPERSLAB { (0,0)-(0,5) }; a.h5; A; ALL; HYPERSLAB { (1,0)-(1,5) }; b.h5; B; ALL; HYPERSLAB { (2,0)-(2,5) }; c.h5; C; ALL; } } } FILTERS { ....... I just commented the code with "EIP" and didn't delete to simplify the review with Allen tomorrow. Tested on jam | ||||
* | | [svn-r26296] Merge r26050 through 26295 from trunk to vds branch. | Neil Fortner | 2015-02-24 | 215 | -8766/+2733 |
|\ \ | |/ | | | | | Tested: ummon | ||||
| * | [svn-r26294] Fix for HDFFV-9132. | Scot Breitenfeld | 2015-02-24 | 2 | -1/+32 |
| | | | | | | | | tested: h5committest | ||||
| * | [svn-r26280] Removed tab indenting for Fortran source, tab indenting is not ↵ | Scot Breitenfeld | 2015-02-23 | 2 | -12/+12 |
| | | | | | | | | F2003 standard compliant. | ||||
| * | [svn-r26279] re-commit 26260 that Dana moved out fixing the versioning of ↵ | Mohamad Chaarawi | 2015-02-23 | 11 | -45/+363 |
| | | | | | | | | functions to work with v16 default API. | ||||
| * | [svn-r26277] remove filename extension | Allen Byrne | 2015-02-23 | 1 | -1/+1 |
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| * | [svn-r26276] Merged r26075-80, 86 from features/autotools_rework branch. | Dana Robinson | 2015-02-23 | 8 | -587/+83 |
| | | | | | | | | | | | | | | | | | | | | | | | | Cleans up time functions in the autotools input files. Removed deprecated gettimeofday() time zone code and configure processing. Also removed some unused time function configure checks and defines. Fixes: HDFFV-9083 and HDFFV-9085 Tested on: 32-bit linux, serial and parallel (jam) OS X (kite) Solaris (emu) | ||||
| * | [svn-r26275] Merge of r26042, 26083, 26084, 26085 from features/autotools_rework | Dana Robinson | 2015-02-22 | 3 | -105/+94 |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | - Updated configure.ac so that the direct VFD can now be built without specifying _GNU_SOURCE, etc. on the command line. - The direct VFD is now disabled by default. It was previously enabled, but the configuration script couldn't configure it properly, making it a moot point. Fixes: HDFFV-9057, HDFFV-7567, HDFFV-9088, HDFFV-7566 Tested on: h5committest jam w/ direct VFD (*very* slow!) NOTE: platypus cmake fails, but this is not a new error. | ||||
| * | [svn-r26272] Merge of r26071 from features/autotools_rework | Dana Robinson | 2015-02-22 | 5 | -75/+6 |
| | | | | | | | | | | | | | | | | | | | | | | | | Removes the --with-default-vfd option from configure. This was basically useless and only allowed selecting the stdio VFD. Since this is a demo VFD and not really a production VFD, we decided to retire this option. Fixes: HDFFV-9081 Tested on: h5committest NOTE: platypus cmake fails, but this is not a new error. | ||||
| * | [svn-r26271] Reverse merge of r26260 which was causing daily test failures. | Dana Robinson | 2015-02-22 | 12 | -364/+45 |
| | | | | | | | | Tested on: jam w/ parallel and fortran | ||||
| * | [svn-r26260] - add an attribute callback to call H5_term_library when ↵ | Mohamad Chaarawi | 2015-02-20 | 12 | -45/+364 |
| | | | | | | | | | | | | | | | | | | MPI_COMM_SELF is destroyed. - add tests for above. - this is a fix for HDFFV-883. tested h5committest | ||||
| * | [svn-r26259] Remove file | Allen Byrne | 2015-02-20 | 1 | -321/+0 |
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| * | [svn-r26256] Remove file - obsoleted by cmake 3.1 minimum | Allen Byrne | 2015-02-20 | 1 | -1/+1 |
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| * | [svn-r26255] Remove file - obsoleted by cmake 3.1 minimum | Allen Byrne | 2015-02-20 | 1 | -1/+0 |
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| * | [svn-r26254] Changed mpi test to use include 'mpif.h' | Scot Breitenfeld | 2015-02-20 | 1 | -1/+1 |
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