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* [svn-r673] Changes since 19980908Robb Matzke1998-09-0849-720/+920
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./COPYING Reformatted as text instead of C. Removed zlib crew from the list of contributors since no zlib code is actually in the hdf5 library. ./INSTALL ./INSTALL.ascired ./MANIFEST Minor updates for Beta release including version number change. ./INSTALL_MAINT Added information about making a release. ./RELEASE Updated function list based on public header files. ./bin/checkposix Got rid of complaints about some obvious things. ./doc/html/H5.api.html ./doc/html/RM_H5F.html ./src/H5F.c ./src/H5Fpublic.h ./test/tfile.c Changed H5Fget_create_template() and H5Fget_access_template() to H5Fget_create_plist() and H5Fget_access_plist() since that conforms better to lots of other names. ./doc/html/Datatypes.html ./doc/html/ExternalFiles.html ./doc/html/Files.html ./doc/html/H5.api.html ./doc/html/H5.sample_code.html ./doc/html/RM_H5F.html ./doc/html/RM_H5Front.html Changed `template' to `property list', etc. ./doc/html/Ragged.html [NEW] Documentation for ragged arrays. ./src/H5Iprivate.h ./src/H5Ipublic.h ./src/H5I.c Changed the scope of some symbols to be more local. ./src/H5.c ./src/H5AC.c ./src/H5D.c ./src/H5E.c ./src/H5F.c ./src/H5Ffamily.c ./src/H5Fistore.c ./src/H5Flow.c ./src/H5Fsec2.c ./src/H5Fsplit.c ./src/H5Fstdio.c ./src/H5G.c ./src/H5Gnode.c ./src/H5HG.c ./src/H5I.c ./src/H5O.c ./src/H5Ocomp.c ./src/H5Odtype.c ./src/H5Oefl.c ./src/H5Omtime.c ./src/H5Oname.c ./src/H5P.c ./src/H5S.c ./src/H5Shyper.c ./src/H5Tbit.c ./src/H5Tconv.c ./src/H5V.c ./src/H5Z.c ./src/H5private.h Fixed some violations of our naming scheme by adding HD to the beginning of all Posix functions.
* [svn-r672] Changes since 19980904Robb Matzke1998-09-083-6/+16
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./MANIFEST ./bin/release ./bin/snapshot The format of the MANIFEST file has been relaxed -- comments and blank lines should no longer confuse the tools that use it. As before, this file should contain a list of *all* files that are part of HDF5, which means all files which are managed by CVS/SVF. However, files can be marked so they're not part of a release by adding _DO_NOT_DISTRIBUTE_ after the file name. I've removed all the *.obj files from the distribution by adding _DO_NOT_DISTRIBUTE_ after their names. I also removed the old white-papers that might not apply to the current version of the library and documentation about chunking performance since it's wrong now that chunk caching is implemented. Everyone please check the files you're responsible for to make sure that they should really be part of a release. To get a list of all files use grep '^\.' MANIFEST | cut -f1 To get a list of files for distribution use: grep '^\.' MANIFEST | grep -v _DO_NOT_DISTRIBUTE_ (These commands assume tabs in the MANIFEST file. If the file might contain spaces then run it through `unexpand' or `tr' first). ./configure.in ./configure ./src/H5config.h.in ./test/ragged.c Check for sigaction(). ./test/Makefile.in The `clean' target removes the timing tests.
* [svn-r671] Changes since 19980904Robb Matzke1998-09-086-53/+79
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./MANIFEST ./bin/release ./bin/snapshot The format of the MANIFEST file has been relaxed -- comments and blank lines should no longer confuse the tools that use it. As before, this file should contain a list of *all* files that are part of HDF5, which means all files which are managed by CVS/SVF. However, files can be marked so they're not part of a release by adding _DO_NOT_DISTRIBUTE_ after the file name. I've removed all the *.obj files from the distribution by adding _DO_NOT_DISTRIBUTE_ after their names. I also removed the old white-papers that might not apply to the current version of the library and documentation about chunking performance since it's wrong now that chunk caching is implemented. Everyone please check the files you're responsible for to make sure that they should really be part of a release. To get a list of all files use grep '^\.' MANIFEST | cut -f1 To get a list of files for distribution use: grep '^\.' MANIFEST | grep -v _DO_NOT_DISTRIBUTE_ (These commands assume tabs in the MANIFEST file. If the file might contain spaces then run it through `unexpand' or `tr' first). ./configure.in ./configure ./test/ragged.c Check for sigaction(). ./test/Makefile.in The `clean' target removes the timing tests.
* [svn-r670] Fixed a bandwidth calculation for the partial read test.Robb Matzke1998-09-041-5/+11
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* [svn-r669] Added missing file from tools directoryRobb Matzke1998-09-042-1/+2
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* [svn-r668] Tempory turned off the automatic test.Ruey-Hsia Li1998-09-041-1/+1
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* [svn-r667] Revised output because now the h5dump tests are done inRuey-Hsia Li1998-09-035-5/+5
| | | | the directory testfiles.
* [svn-r666] Added TESTS entries to Makefile.in for automatic tests.Ruey-Hsia Li1998-09-032-0/+189
| | | | Initial version of testh5dump.sh which runs the h5dump tests.
* [svn-r665] HDF5 binary files for h5dump tests. Generated by h5dumptst.c.Ruey-Hsia Li1998-09-035-0/+0
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* [svn-r664] Initial version of program that generates hdf5 binary files forRuey-Hsia Li1998-09-031-0/+309
| | | | h5dump tests.
* [svn-r663] Expected output for the h5dump test.Ruey-Hsia Li1998-09-035-0/+145
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* [svn-r662] Fixed a typo in a stringRobb Matzke1998-09-031-1/+1
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* [svn-r661] Skipping a test is not the same as failing.Robb Matzke1998-09-031-1/+1
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* [svn-r660] Fixed timeout problems on slow machinesRobb Matzke1998-09-031-8/+12
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* [svn-r659] Fixed a parallel build problem; make -j should work again now.Robb Matzke1998-09-033-4/+8
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* [svn-r658] Changes since 19980901Robb Matzke1998-09-033-3/+13
| | | | | | | | | | ---------------------- ./test/dtypes.c Got rid of one of some of the `increases alignment' warnings. ./test/tselect.c Got rid of an unused variable.
* [svn-r657] SnapshotRobb Matzke1998-09-033-25/+25
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* [svn-r656] Changed error report for failed optimized parallel xfersRobert Kim Yates1998-09-021-4/+4
| | | | in H5D_read and H5D_write.
* [svn-r655] Changed H5F_low_write's treatment of eof in nonblock parallel writes.Robert Kim Yates1998-09-021-21/+13
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* [svn-r654] Fixed last bug (hah! ;-) for beta release, changed H5Gget_stat to ↵Quincey Koziol1998-09-0223-805/+794
| | | | | | H5Gget_objinfo and renamed internal functions to match up with the renamed API functions.
* [svn-r653] Removed weird binary character in comment. (Probably copyright ↵Quincey Koziol1998-09-021-1/+1
| | | | | | mark, but it was confusing cvs)
* [svn-r652] Removed H5Fmpioprivate.h, moved its contents to H5Fprivate.h.Robert Kim Yates1998-09-012-25/+9
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* [svn-r651] Changed name: call H5Sget_simple_extent_dims instead of old ↵Robert Kim Yates1998-09-011-2/+2
| | | | H5Sextent_dims.
* [svn-r650] Eliminated H5Fmpioprivate.h, moved contents to H5Fprivate.h.Robert Kim Yates1998-09-016-6/+4
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* [svn-r649] Eliminated H5Fmpioprivate.Robert Kim Yates1998-09-011-1/+0
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* [svn-r648] Make subheading numbering consistent and fix error in level 3 headerFrank Baker1998-09-011-6/+8
| | | | | | | numbering sequence. Add internal named link to "File Families" section (for references from Reference Manual).
* [svn-r647] Source code was reformatted according to the hdf5 programming ↵Elena Pourmal1998-09-011-160/+161
| | | | standards.
* [svn-r646] Source code was reformatted according to the hdf5 programming ↵Elena Pourmal1998-09-011-142/+144
| | | | standards.
* [svn-r645] ./examples/h5_attribute.cElena Pourmal1998-09-014-5/+10
| | | | | | | | | | | | ./examples/h5_select.c Cosmetic changes to the source format ./examples/h5_chunk_read.c ./examples/h5_read.c Third argument in the H5select_hyperslab function had wrong datatype. Fixed.
* [svn-r644] Changes since 19980931Robb Matzke1998-09-014-677/+684
| | | | | | | ---------------------- ./test/cmpd_dset.c Uncommented the last test again and there are still bugs.
* [svn-r643] INSTALL : Section "for those who do not like to read" has been ↵Elena Pourmal1998-09-012-1/+9
| | | | | | edited. MANIFEST: New example files have been added.
* [svn-r642] SnapshotRobb Matzke1998-09-011-1/+1
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* [svn-r641] Changed function names for beta release.Quincey Koziol1998-09-0127-742/+747
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* [svn-r640] Added __unused__ to H5S_mpio_spaces_xfer parameters pline and efl.Robert Kim Yates1998-08-311-4/+4
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* [svn-r639] Two new examples h5_select.c and h5_attribute.c were added to the ↵Elena Pourmal1998-08-313-5/+482
| | | | | | | | directory. Makefile.in was modified to reflect those changes. Tested on Sun Sparc ( baldric) and DEC Alpha (gondolin)
* [svn-r638] Added function prototypes.Robert Kim Yates1998-08-311-0/+26
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* [svn-r637] Added include H5Fmpioprivate.hRobert Kim Yates1998-08-316-0/+6
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* [svn-r636] Removed warning messages during compilation.Ruey-Hsia Li1998-08-313-120/+227
| | | | | Used H5Gstat to check object type. Modified h5dumputil.c to reflect changes of h5tools.c
* [svn-r635] Changes since 19980831Robb Matzke1998-08-3117-943/+1128
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./Makefile.in Running `make distclean' will not fail if one of the subdirectories has already been cleaned. ./config/BlankForm ./config/irix5.3 Cleaned it up more. Added better support/documentation for systems that have more than one compiler. ./config/alpha-dec-osf4.0 [NEW] Added a new config file as a result of testing on Jim Reus's machine. ./test/chunk.c Scaled down the testing range so we can actually run it interactively. ./tools/h5import.c Included <unistd.h> to get rid of warning for close(). ./src/H5detect.c Seg-faults on Linux for some reason when NDEBUG is defined, so I just undef it at the top of the source. ./test/big.c Added a fflush(). ./tools/h5ls.c The `-d' flag now works even when `-v' isn't specified. ./examples/h5_chunk_read.c ./examples/h5_compound.c ./examples/h5_extend_write.c ./examples/h5_group.c ./examples/h5_read.c ./examples/h5_write.c Indented according to hdf5 standards. Fixed compiler warnings
* [svn-r634] *** empty log message ***Albert Cheng1998-08-311-1/+1
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* [svn-r633] Changes since 19980828Robb Matzke1998-08-3119-458/+525
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./RELEASE Updated with important changes I made since the second beta. ./src/H5A.c ./src/H5D.c ./src/H5Dprivate.h ./src/H5G.c ./src/H5Gprivate.h ./src/H5R.c ./src/H5Rprivate.h ./src/H5T.c ./src/H5Tprivate.h Any API function that used to take an `hid_t loc_id' followed by a `const char *name' can now take any type of object for the loc_id as long as the object is somehow associated with a file. Internally, H5G_loc() was modified to return an H5G_entry_t* instead of an H5G_t* so it's more general. Among other things, this allows one to retrieve information about an object like a named type or dataset without knowing the name of the type or dataset: int get_nlinks (hid_t obj) { H5G_stat_t sb; if (H5Gstat(obj, ".", TRUE, &sb)<0) return -1; return sb.nlink; } ./test/gheap.c ./test/istore.c These files needed a couple of changes because they call some of the internal functions whose H5G_t arguments changed to H5G_entry_t. ./src/H5A.c Got rid of all the switch statements for getting symbol table entries for varous objects and replaced them with a call to H5G_loc() allowing attributes to automatically apply to any type of object that belongs to a file. ./test/Makefile.in Moved the ragged array tests from the normal list of tests to the `make timings' target. ./test/ragged.c Added rewrite tests -- rewrite the rows of a dataset changing the number of rows and the length of each row. ./test/mtime.c Added a test that checks that H5Gstat() can be called with a dataset as the first argument. ./src/H5S.c Added #ifdef HAVE_PARALLEL around code to check for the HDF5_MPI_OPT_TYPES environment variable because the global variable that gets set is #ifdef'd. ./bin/release bzip2 uses .bz2 as the file extension.
* [svn-r632] Extended comment about elimination of redundant metadata writes.Robert Kim Yates1998-08-291-0/+7
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* [svn-r631] Added H5Fmpioprivate.hRobert Kim Yates1998-08-281-0/+1
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* [svn-r630] Added code to eliminate redundant writes of metadata,Robert Kim Yates1998-08-289-3/+155
| | | | | | so only proc 0 writes it to disk. The elimination is activated only when the environment variable HDF5_MPI_1_METAWRITE is nonzero; otherwise all processes that opened the file will write the metadata to disk.
* [svn-r629] Put ifdef HAVE_PARALLEL around init of H5_mpi_opt_types_g.Robert Kim Yates1998-08-281-0/+2
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* [svn-r628] MPI buffer and file type optimization is bypassed,Robert Kim Yates1998-08-283-2/+24
| | | | unless the environment variable HDF5_MPI_OPT_TYPES is nonzero.
* [svn-r627] Changes since 19980827Robb Matzke1998-08-2811-423/+1070
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./src/H5G.c Fixed a link count on groups. Groups were always created with a link count of zero instead of one. ./src/H5Gpublic.h Added H5G_NTYPES so applications can easily declare arrays which are indexed by object type. ./src/H5O.c Calling `H5O_link(&ent,0)' will succeed when the file is open for read only because it's the only way to get the object's current link count. ./tools/h5ls.c Can take non-group object names on the command line (and multiple objects). Reorganized to be more extendible. The link count is displayed for `-v'. ./src/H5F.c Dumping of cache statistics is controlled by only the HDF5_DEBUG environment variable and not the H5F_ACC_DEBUG flag for H5Fopen() and H5Fcreate() since this makes it similar to the other debugging options. ./src/H5R.c ./test/ragged.c ./test/Makefile.in Tests pass but still a little work left to be done.
* [svn-r626] Turned some MPI hyperslab type optimization back onRobert Kim Yates1998-08-281-11/+8
| | | | (may coalesce contiguous blocks of outer dims, but won't collapse inner dims).
* [svn-r625] Have temporarily turned off coalescing optimizations in MPI ↵Robert Kim Yates1998-08-281-33/+40
| | | | | | | | hyperslab types until I can test and debug them more fully. Transfers using MPI buf and file types are correct, but this version doesn't attempt to optimize the types by coalescing contiguous blocks.
* [svn-r624] Removed <hardlink>.Ruey-Hsia Li1998-08-271-17/+16
| | | | Added <nlink>opt to <dataset> and <group>.
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