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| | | * | | | | | | | | | | | | [svn-r27479] Add checking for invalid inputs to H5Dset_virtual: point ↵Neil Fortner2015-08-0711-42/+306
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | selections, incorrect numbers of elements selected, incorrect "slice" through limited dimensions, incorrect number of printf substitutions. Patch source selection space extent with bounds of selection if extent is unknown before returning via H5Pget_virtual_srcspace. Write updated VDS dataspace to file when it changes due to unlimited selections. Other minor fixes/cleanup. Tested: ummon
| | | * | | | | | | | | | | | | [svn-r27453] Merge revisions 27418 through 27452 from trunk to vds branch.Neil Fortner2015-08-0324-24/+637
| | | |\ \ \ \ \ \ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested: ummon
| | | * | | | | | | | | | | | | | [svn-r27450] Add descriptions for all non-public functions.Neil Fortner2015-07-317-45/+156
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Other comments. Add some input checking. Tested: ummon
| | | * | | | | | | | | | | | | | [svn-r27425] Implement support for H5Pequal with VDS properties.Neil Fortner2015-07-222-1/+54
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Testing for H5Pequal with VDS. Tested: ummon
| | | * | | | | | | | | | | | | | [svn-r27424] Implement support for h5debug for VDS.Neil Fortner2015-07-226-50/+250
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Implement support for H5Pencode/decode with VDS properties. Testing for H5Pencode/decode with VDS. Relax assertion check for number of elements written to buffer as we do not check for overlaps in mappings. Other minor fixes/cleanup. Tested: ummon
| | | * | | | | | | | | | | | | | [svn-r27420] Fixed VDS test to handle the family driver correctly.Neil Fortner2015-07-213-44/+79
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested: ummon
| | | * | | | | | | | | | | | | | [svn-r27419] Merge revisions 27394 through 27418 from trunk to vds branch.Neil Fortner2015-07-2123-247/+969
| | | |\ \ \ \ \ \ \ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested: ummon
| | | * | | | | | | | | | | | | | | [svn-r27398] Fixed potential issue layouts with compilers that do not ↵Neil Fortner2015-07-151-0/+3
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | support designated initializers. Tested: ummon
| | | * | | | | | | | | | | | | | | [svn-r27397] Merge revisions 27255 through 27393 from trunk to vds branch.Neil Fortner2015-07-1568-4622/+4921
| | | |\ \ \ \ \ \ \ \ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested: ummon
| | | * | | | | | | | | | | | | | | | [svn-r27324] Remove extra character on end of file nameAllen Byrne2015-07-021-1/+1
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| | | * | | | | | | | | | | | | | | | [svn-r27323] Implement support for H5Dflush for VDS.Neil Fortner2015-07-025-139/+350
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Implement support for H5Ocopy on VDS. Testing for H5Ocopy on VDS. Fix check-vfd failure. Other minor fixes/cleanup. Note there is a preexisting failure in h5repack testing. Tested: ummon
| | | * | | | | | | | | | | | | | | | [svn-r27321] Fixed VDS test framework to check for zlib,Allen Byrne2015-07-024-30/+51
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | and fix file copy list paths
| | | * | | | | | | | | | | | | | | | [svn-r27317] switch internal cdash URLAllen Byrne2015-06-301-1/+1
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| | | * | | | | | | | | | | | | | | | [svn-r27309] switch public cdash URLAllen Byrne2015-06-301-1/+1
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| | | * | | | | | | | | | | | | | | | [svn-r27300] Add h5repack and h5diff VDS testsAllen Byrne2015-06-302-167/+240
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| | | * | | | | | | | | | | | | | | | [svn-r27284] Modify VDS implementation to always use FAPL and DAPL from VDS ↵Neil Fortner2015-06-256-55/+118
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | file and dataset to open source files and datasets, instead of using the default property lists. Modify VDS to reject attempts at parallel I/O, fix parallel compile error. Modify VDS to not write fill value to memory buffer if the fill value is undefined. Other minor fixes/cleanup. Tested: ummon
| | | * | | | | | | | | | | | | | | | [svn-r27266] Change tests to use simple mode - eliminates native type use.Allen Byrne2015-06-229-161/+165
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Combine float checks and int checks to eliminate possible conflicts
| | | * | | | | | | | | | | | | | | | [svn-r27265] corrected test paramsAllen Byrne2015-06-221-6/+6
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| | | * | | | | | | | | | | | | | | | [svn-r27256] Merge revisions 27102 through 27255 from trunk to vds branch.Neil Fortner2015-06-19114-17072/+22334
| | | |\ \ \ \ \ \ \ \ \ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested: ummon
| | | * | | | | | | | | | | | | | | | | [svn-r27249] Used versioned APIs to fix the daily tests errors with the ↵Elena Pourmal2015-06-198-24/+24
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | --with-default-api-version=v16 builds. Tested on jam.
| | | * | | | | | | | | | | | | | | | | [svn-r27248] Daily tests in the VDS brnach reported missing file in ↵Elena Pourmal2015-06-191-0/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | MANIFEST. Fixed.
| | | * | | | | | | | | | | | | | | | | [svn-r27246] Remove "clipped" status from unlimited selections, decoupling ↵Neil Fortner2015-06-188-607/+392
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | them from the extent. Improve algorithm for calculation of VDS extent by removing the need for a temporary copy of a dataspace. Other minor fixes/cleanup. Tested: ummon
| | | * | | | | | | | | | | | | | | | | [svn-r27245] Maintenance: Eiger example had wrong printf type of name (had ↵Elena Pourmal2015-06-181-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | dimension number in it). Fixed. Tested on jam.
| | | * | | | | | | | | | | | | | | | | [svn-r27239] Add function prototype for local functionAllen Byrne2015-06-181-29/+30
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| | | * | | | | | | | | | | | | | | | | [svn-r27236] The vds h5diff filesAllen Byrne2015-06-173-0/+29
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| | | * | | | | | | | | | | | | | | | | [svn-r27235] Add vds h5diff testsAllen Byrne2015-06-172-43/+93
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| | | * | | | | | | | | | | | | | | | | [svn-r27234] Add layout test from virtual to Contiguous and Compact ↵Allen Byrne2015-06-171-1/+30
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | generated files to clearall
| | | * | | | | | | | | | | | | | | | | [svn-r27233] Add layout test from virtual to Contiguous and CompactAllen Byrne2015-06-171-35/+85
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| | | * | | | | | | | | | | | | | | | | [svn-r27231] Fix bug in configure that prevented running make.Neil Fortner2015-06-172-2/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested: ummon
| | | * | | | | | | | | | | | | | | | | [svn-r27229] remove copy-paste errors from listAllen Byrne2015-06-172-12/+0
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| | | * | | | | | | | | | | | | | | | | [svn-r27224] Fix bug that prevented reading from datasets with unlimited ↵Neil Fortner2015-06-171-31/+41
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | mappings with missing source datasets. Decided not to attempt to open the source dataset in this case, as doing so could create issues related to the sizing of the VDS. Users should call H5Dget_space to open these datasets. No regression test yet. Tested: ummon
| | | * | | | | | | | | | | | | | | | | [svn-r27220] Maintenance: Added copyrigth; removed read buffer ↵Elena Pourmal2015-06-161-5/+15
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | initialization since fill value feature works now. Tested on jam.
| | | * | | | | | | | | | | | | | | | | [svn-r27219] Add h5dump and h5 ls VDS test scripts to autools configureAllen Byrne2015-06-166-89/+98
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| | | * | | | | | | | | | | | | | | | | [svn-r27218] Add VDS tests to h5lsAllen Byrne2015-06-1610-1/+503
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| | | * | | | | | | | | | | | | | | | | [svn-r27215] Fix issue where % characters could not be used in non-printf ↵Neil Fortner2015-06-165-74/+174
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | mappings. Other minor fixes/cleanup. Tested: ummon
| | | * | | | | | | | | | | | | | | | | [svn-r27214] Fixed a bug on Windows where dcpls were set to be chunked and ↵Dana Robinson2015-06-162-3/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | not virtual. This was due to a simple copy-paste issue in the initializer that is used when C99 initializers are not available. Also fixed a dims array size error in the vds test. Tested on: 64-bit Win7 with VS2013
| | | * | | | | | | | | | | | | | | | | [svn-r27197] Improve performance of "printf" VDS with selections in the file ↵Neil Fortner2015-06-124-20/+97
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | space - the library no longer iterates over all source datasets in the printf mapping, it now only looks at the ones that could be involved in I/O (the ones whose bounds overlap with the selection in the unlimited dimension). Tested: ummon
| | | * | | | | | | | | | | | | | | | | [svn-r27195] Add h5dump cmake tests and files.Allen Byrne2015-06-1298-268/+2760
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Add tools gen cmake files move testfiles for pbits to subdir as well as vds Tested: local linux
| | | * | | | | | | | | | | | | | | | | [svn-r27192] Improve support for printf selections (support partial blocks withNeil Fortner2015-06-128-261/+1108
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | H5_VDS_FIRST_MISSING) Add test for this Rework VDS code to not depend on unlimited selections having a "clipped" state in preparation for removing the clipped state from unlimited selections. Other bug fixes/cleanup Tested: Kubuntu 64 (home computer)
| | | * | | | | | | | | | | | | | | | | [svn-r27191] Merged r26781 to r27185 from trunkDana Robinson2015-06-11224-2087/+2457
| | | |\ \ \ \ \ \ \ \ \ \ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested on: 64-bit Ubuntu Linux VM w/ gcc 4.8.2 (C++ and Fortran 2003 also tested)
| | | * | | | | | | | | | | | | | | | | | [svn-r27174] Fix bug in H5S__hyper_project_intersection that affected empty ↵Neil Fortner2015-06-091-5/+8
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | selections. Tested: ummon
| | | * | | | | | | | | | | | | | | | | | [svn-r27166] Updated MANIFEST to include test/vds.c and tools/misc/vds files.Dana Robinson2015-06-091-1/+15
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| | | * | | | | | | | | | | | | | | | | | [svn-r27161] Added makefiles to tools/misc/vds to build the generators.Dana Robinson2015-06-086-58/+1602
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested on: jam
| | | * | | | | | | | | | | | | | | | | | [svn-r27160] Added VDS generator files.Dana Robinson2015-06-0811-6/+1758
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | The Makefiles have not been updated so they don't compile yet.
| | | * | | | | | | | | | | | | | | | | | [svn-r27155] Change H5Pget_virtual_view to return herr_t and take a pointer ↵Neil Fortner2015-06-052-9/+12
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | to the view as a parameter. Also fix bug in H5Pget_virtual_printf_gap. Tested: jam
| | | * | | | | | | | | | | | | | | | | | [svn-r27153] Implement fill value support for VDS.Neil Fortner2015-06-059-1023/+1560
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Add testing for this. Fix bug in printf string parsing. Add test for this. Other minor fixes/cleanup. Tested: ummon
| | | * | | | | | | | | | | | | | | | | | [svn-r27152] Updated bin/trace and src/H5trace.c to handle the H5D_vds_view_tDana Robinson2015-06-043-0/+35
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | enum type. Tested on: jam
| | | * | | | | | | | | | | | | | | | | | [svn-r27150] Added an empty VDS testfile generator to tools/misc directory.Dana Robinson2015-06-044-8/+49
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | test/Makefile.in was updated due to changes in the Makefile.am file that missed a reconfigure. The changes just added a few VDS test files to the deletion list. Note that there are trace issues with a new VDS struct that show up when running bin/reconfigure. I reverted these for fixing at a future date. Tested on: jam
| | | * | | | | | | | | | | | | | | | | | [svn-r27145] Add some testing for printf-style source dataset name resolution.Neil Fortner2015-06-0310-325/+3090
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Various bug fixes, including a temporary fix for printf with FIRST_MISSING view. Other cleanup. Tested: ummon
| | | * | | | | | | | | | | | | | | | | | [svn-r27104] Add support for printf-style source dataset name resolution.Neil Fortner2015-05-2210-401/+1356
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Passes use case test, no regression tests yet. Add functions H5Pset/get_virtual_printf_gap (not tested yet). Other minor fixes/cleanup. Tested: ummon