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* [svn-r14155] Copy user block when repack a file by defualt.Peter Cao2007-09-251-3/+86
| | | | (need to add more options as stated in bug 173)
* [svn-r14154] Description:Quincey Koziol2007-09-2531-519/+479
| | | | | | | | | | | | | | | | | | | | Finish deprecating last H5G symbol (H5G_obj_t) - yay! Lots of misc. library fixes to remove confusion between links and objects. The tools could still use another pass, to remove h5trav_type_t type and make the correct distinction between links & objects. Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode AIX/32 5.3 (copper) w/FORTRAN, w/parallel, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode
* [svn-r14153] Description:Quincey Koziol2007-09-251-0/+258
| | | | | | | | | | | | | Add regression test for H5Rget_obj_type1() Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 2.10 (linew) AIX/32 5.3 (copper) Mac OS X/32 10.4.10 (amazon)
* [svn-r14150] Pedro Vicente Nunes2007-09-181-1/+1
| | | | | | bug fix: a CHECK macro had a wrong function name (H5Pget_link_creation_order) in the description tested: linux
* [svn-r14149] Purpose: Add new source files to Windows projectsScott Wegner2007-09-174-216/+270
| | | | | | | | Description: Two new files, h5rdeprec.c and h5rpkg.h were added to the Windows HDF5 projects. Tested: VS2005, build only.
* [svn-r14148] Description:Quincey Koziol2007-09-1428-361/+651
| | | | | | | | | | | | | | | | Add H5Rget_obj_type() to the API versioning and switch internal routines to use H5Rget_obj_type2() Misc. other code cleanups, etc. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) AIX/32 5.3 (copper) Solaris/32 2.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14147] Description:Quincey Koziol2007-09-132-12/+0
| | | | | | | | Clean up some "WANT_H5_V1_4_COMPAT" #ifdefs that somehow survived this far... Tested on: FreeBSD/32 6.2 (duty)
* [svn-r14146] Description:Quincey Koziol2007-09-1315-448/+446
| | | | | | | | | | | | | | Move H5Gget_objtype_by_idx() to deprecated symbols section, replacing with H5Oget_info_by_idx() Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) AIX/32 5.3 (copper) Solaris/32 2.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14145] Description:Quincey Koziol2007-09-139-130/+134
| | | | | | | | | | | | | | Move H5Gget_objname_by_idx() to deprecated symbols section. Replace internal usage with H5Lget_name_by_idx(). Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) AIX/32 5.3 (copper) Solaris/32 2.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14144] Description:Quincey Koziol2007-09-1365-5822/+5012
| | | | | | | | | | | | | | | | Move H5Gget_objinfo() to deprecated symbols section and retarget internal usage to H5Lget_info()/H5Oget_info(). Misc. other code cleanups... Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) AIX/32 5.3 (copper) Solaris/32 2.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14142] Purpose: Add files forgotten in yesterday's checkinScott Wegner2007-09-118-0/+2230
| | | | | | | | Description: In my large checkin yesterday, I forgot to add a few Windows project files that were renamed. This should bring the MANIFEST up to date. Tested: Will use chkmanifest after commit
* [svn-r14141] Purpose: Update Windows testing documentationScott Wegner2007-09-101-145/+84
| | | | | | | | Description: There are minor changes in the testing process for Windows with the new test scripts. Specifically, the test output is output to the screen, rather than redirected into files, by default. Also, it is much easier to test parts modularly, and installing DLLs is one step, instead of separated batch files. Tested: None, only documentation changed.
* [svn-r14140] Purpose: Fix typo from last checkinScott Wegner2007-09-101-1/+1
| | | | | | | | Description: There was a minor typo in the Windows test script for h5copy. It was actually causing us to do extra work, so this checkin should make the test slightly more efficient, without breaking anything. Tested: VS2005 on WinXP
* [svn-r14139] Description:Quincey Koziol2007-09-102-164/+171
| | | | | | | Minor edits to clean up code. Tested on: FreeBSD/32 6.2 (duty)
* [svn-r14138] Scott Wegner2007-09-1060-6529/+4980
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* [svn-r14137] Description:Quincey Koziol2007-09-071-1/+1
| | | | | | | | Correct name used for checking objects to operate on for h5repack, exposed by recent traversal routine changes. Tested on: Solaris/32 5.10 (linew) w/szip
* [svn-r14136] Description:Quincey Koziol2007-09-0625-1203/+1174
| | | | | | | | | | | | | | Move H5Gget_num_objs() and several minor macros, etc. to deprecated symbols section, replacing it with H5Gget_info(). Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) AIX/32 5.3 (copper) Solaris/32 5.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14134] Description:Quincey Koziol2007-08-311-4/+4
| | | | | | | Cast usage of hsize_t variable as array index into size_t. Tested on: Linux/32 2.6 (kagiso) w/PGU compilers
* [svn-r14133] Description:Quincey Koziol2007-08-311-1/+1
| | | | | | | Fix naming change for FORTRAN symbol: H5G_LINK_ERROR -> H5L_TYPE_ERROR Tested on: Solaris/32 5.10 (linew)
* [svn-r14132] Description:Quincey Koziol2007-08-303-256/+219
| | | | | | | | | | Regenerate the h5diff_types.h5 file, which had somehow gotten mangled in some earlier checkin (prior to ~2-3 days ago, at least). Clean up formatting a bit also.. Tested on: Mac OS X/32 10.4.10 (amazon)
* [svn-r14131] Description:Quincey Koziol2007-08-3031-340/+365
| | | | | | | | | | | | | | Move H5Giterate() and H5G_iterate_t to deprecated symbols section, replacing them with H5Literate and H5L_iterate_t respectively. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) AIX/32 5.3 (copper) Solaris/32 5.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14130] Description:Quincey Koziol2007-08-301-2/+2
| | | | | | | Correct typo in FORTRAN wrapper for retrieving the comment for an object Tested on: FreeBSD/64 6.2 (liberty)
* [svn-r14129] Description:Quincey Koziol2007-08-3016-307/+502
| | | | | | | | | | | | | | | | Add H5O{set|get}_comment routines, which were overlooked before. Move H5G{set|get}_comment routines to deprecated code section, replacing internal calls with H5O{set|get}_comment. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew) AIX/32 5.3 (copper) Mac OS X/32 10.4.10 (amazon)
* [svn-r14128] Description:Quincey Koziol2007-08-301-1/+1
| | | | | | | Correct typo in error returned from H5G_open_name() routine. Tested on: FreeBSD/32 6.2 (duty)
* [svn-r14127] Description:Quincey Koziol2007-08-298-183/+174
| | | | | | | | | | | | | Move H5Gget_linkval to deprecated symbol section and replace with H5Lget_val for internal calls. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14126] Description:Quincey Koziol2007-08-2921-1085/+1102
| | | | | | | | | | | | | Move H5Gunlink to deprecated symbol section, replacing internal calls with H5Ldelete. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14125] Description:Quincey Koziol2007-08-291-1/+1
| | | | | | | Correct another typo in return value on error FAIL -> NULL Tested on: FreeBSD/32 6.2 (duty)
* [svn-r14124] Description:Quincey Koziol2007-08-291-1/+1
| | | | | | | Fix typo H5Gopenw -> H5Gopen2 Tested on: FreeBSD/32 6.2 (duty)
* [svn-r14123] Description:Quincey Koziol2007-08-286-50/+43
| | | | | | | | | | | | | Move H5Gmove2() to deprecated code section, replacing it with H5Lmove() in the source code. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14122] Description:Quincey Koziol2007-08-2811-207/+207
| | | | | | | | | | | | | Move H5Gmove() to deprecated code section, replacing with H5Lmove() in source files. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14121] Description:Quincey Koziol2007-08-282-5/+5
| | | | | | | Correct a couple of swapped parameters for creating soft links. Tested on: FreeBSD/64 6.2 (liberty)
* [svn-r14120] Description:Quincey Koziol2007-08-2811-221/+224
| | | | | | | | | | | | Move H5Glink2 to deprecated routines section. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14119] Description:Quincey Koziol2007-08-281-1/+1
| | | | | | | Fix typo in FORTRAN wrapper for H5Glink. Tested on: FreeBSD/64 6.2 (liberty) w/FORTRAN
* [svn-r14118] Description:Quincey Koziol2007-08-281-2/+2
| | | | | | | | | Fix inverted link parameters in setup() routine. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Solaris/32 5.10 (linew)
* [svn-r14117] Description:Quincey Koziol2007-08-2819-482/+503
| | | | | | | | | | Move H5Glink() into "deprecated routines" section, replacing internal usage with H5Lcreate_hard/H5Lcreate_soft. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Solaris/32 5.10 (linew)
* [svn-r14116] Description:Quincey Koziol2007-08-281-7/+9
| | | | | | | | Fix error in end_obj() macro to make it safer in situations without enclosing braces. Tested on: Mac OS X/32 10.4.10 (amazon)
* [svn-r14115] Description:Quincey Koziol2007-08-2853-2968/+2863
| | | | | | | | | | | | | | | | | Remove all plain calls to H5Gopen() from source, replacing them with either H5Gopen2(). Add test for H5Gopen1(). Reformatted several pieces of code, to clean them up. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14114] Purpose: Fix a subtle Windows bug in h5unjamScott Wegner2007-08-271-1/+1
| | | | | | | | | Description: In h5unjam.c, there was a call to "open", rather than "HDopen". This isn't a problem on most platforms, as the are equivalent. However, on Windows, we use the HDopen macro to unconditionally set the O_BINARY flag. This is needed to safely seek within a file. Tested: VS2005 on WinXP h5committest (kagiso linew smirom)
* [svn-r14112] Description:Quincey Koziol2007-08-241-11/+18
| | | | | | | Avoid file size queries/comparisons when using core VFD. Tested on: FreeBSD/32 6.2 (duty) w/core VFD
* [svn-r14110] Document MPI-IO compiler problem on tungsten.MuQun Yang2007-08-241-0/+20
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* [svn-r14109] Description:Quincey Koziol2007-08-233-5/+35
| | | | | | | | | Make certain to define the API function and typedef version macros in all situations. Tested on: FreeBSD/32 6.2 (duty) Mac OS X/32 10.4.10 (amazon)
* [svn-r14108] Description:Quincey Koziol2007-08-232-12/+12
| | | | | | | | | | | | Make version macro for typedefs closer to version macro for API functions. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew)
* [svn-r14104] Description:Quincey Koziol2007-08-2354-1665/+1735
| | | | | | | | | | | | | Pursue calls to H5Gcreate() relentlessly and ruthlessly exterminate them, leaving only a few tame specimens in text files and comments. ;-) Tested on: Mac OS X/32 10.4.10 (amazon) FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew)
* [svn-r14103] A user reported that the files generated from Lex and Yacc in ↵Raymond Lu2007-08-235-230/+257
| | | | | | | the library conflict with his application with Lex and Yacc. To solve the problem of multiple definitions of Lex or Yacc functions or variables, use the -P or -p command option to change the prefix of these functions and variables from yy to H5LTyy. Tested on kagiso, linew, smirom.
* [svn-r14101] Description:Quincey Koziol2007-08-232-4/+3
| | | | | | | | | Change definition of H5E_walk1_t compatibility type to match the H5E_walk_t type in the 1.6.x library. Tested on: Mac OS X/32 10.4.10 (amazon) Too minor to require commit test
* [svn-r14099] Purpose: Fix Windows libtest_cstubdll output directoryScott Wegner2007-08-221-4/+4
| | | | | | | | Description: Previously, the libtest_cstubdll project was creating the DLL in the project directory, rather than the Output directory. This was a simple typo, and not caught previously because past builds had the DLL installed. Cleaning up our batch files will make this easier to catch in the future. Tested: VS2005 on WinXP x64
* [svn-r14098] Description:Quincey Koziol2007-08-213-14/+14
| | | | | | | | Clean up a few remaining API compatibility issues in the H5E API for parallel configurations Tested on: FreeBSD/64 6.2 (liberty) w/parallel
* [svn-r14097] Description:Quincey Koziol2007-08-2121-372/+686
| | | | | | | | | | | | | First real use of API versioning code, H5E routines switched to use new API versioning scheme. Tested on: Mac OS X/32 10.4.10 (amazon) FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew)
* [svn-r14096] There're 3 changes in this checkin as below:Raymond Lu2007-08-208-42/+392
| | | | | | | | | | | | | | | | | | 1. In H5Dwrite and H5Dread, let the data buffer point to a fake address if the application passes in an empty buffer. This is mainly for MPIO programs that some processes may not have any data to write or read but still participate the I/O. This solution solves some MPI's problem like the ChaMPIon on tungsten which doesn't support empty buffer. 2. The ChaMPIon on tungsten doesn't support complex derived MPI data type correctly and collective I/O when some processes don't have any data to write or read correctly. Detect the compiler "cmpicc" in the system-specific config file and set the variables for these two cases to false. The PHDF5 library already has set up a way to switch collective chunked I/O to independent under these two cases. 3. A bug fix - During the work of the optimization for compound data I/O, the case for switching collective chunked I/O to independent I/O was leftout. Fixed it by adding I/O caching to it in H5D_multi_chunk_collective_io in H5Dmpio.c. Tested on tungsten, cobalt, and kagiso for parallel; on linew and smirom for serial.
* [svn-r14093] Purpose: Convert Windows projects to VS2005 format and support ↵Scott Wegner2007-08-16277-18741/+93331
| | | | | | | | | | | 64-bit Fortran Description: This checkin is another Windows project cleanup, and also extends our Windows support for 64-bit Fortran. Project files are now in VS2005 format, rather than VS.NET. A couple projects have been renamed to be more descriptive (*cstub rather than *_lib), and project settings make better use of build macros. This will make them much easier to update in the future. Tested: VS2005 on WinXP 32-bit VS2005 on WinXP x64
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