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* [svn-r11686] Purpose:Quincey Koziol2005-11-0746-870/+6253
| | | | | | | | | | | | | | | | | | | New feature Description: Add in baseline "object copy" code from Peter [in the form of a new API routine: H5Gcopy()]. There's still some work to do (like handling variable- length datatypes and possibly support for references) and it hasn't been tested on mounted files yet, but the core functionality is there and working correctly. I've also got a set of patches to update the 1.6 branch with tweaks to keep the branches mostly in sync, but Elena will kill me if I import them before the 1.6.5 release is out... :-) Platforms tested: FreeBSD 4.11 (sleipnir) h5committested
* [svn-r11683] Raymond Lu2005-11-041-39/+38
| | | | | | | | | | Purpose: Minor bug fix Description: Static function test_text_dtype() has static subroutines defined after itself. The gcc compiler on sleipnir complained. Solution: put test_text_dtype() after subroutine's definition. Platforms tested: sleipnir with gcc 4.0 where the complaints happened. Simple change.
* [svn-r11681] Purpose:James Laird2005-11-041-2/+4
| | | | | | | | | | Updated RELEASE.txt Description: Mentioned that h5c++ and h5fc now support linking against shared libraries. Platforms tested: documentation change only
* [svn-r11680] Purpose:Quincey Koziol2005-11-041-9/+9
| | | | | | | | | | | Code cleanup Description: Clean up H5Dcreate a little, to prepare for coding standards discussion today. Platforms tested: Just eyeballed, too trivial to require testing.
* [svn-r11678] Purpose:Albert Cheng2005-11-031-20/+44
| | | | | | | | | | | | Bug fix, feature. Description: Fix a bug to recognize "#xyz..." is a comment in the init file. Add more binary data file types. Added prunepath command. Platforms tested: heping.
* [svn-r11677] Purpose: UpdateRaymond Lu2005-11-031-0/+5
| | | | | Misc. update: Update for the new feature H5LTtext_to_dtype() with new files in HL library.
* [svn-r11676] Purpose: New featureRaymond Lu2005-11-0310-7/+4227
| | | | | | | | | | | | | | | Description: Adding the new function H5LTtext_to_dtype() for converting text description to data type. The next step will be H5LTdtype_to_text(). Solution: Use Lex and Yacc to do parsing of the text. H5LTanalyze.l is the lexer for analyzing the input; H5LTparse.y is the parser. They are not part of HL library, but are used to generate lex.yy.c (from H5LTanalyze.l) as well as y.tab.c and y.tab.h (from H5LTparse.y). The tools used to create these source files are GNU FLEX and YACC on a Linux machine (fuss). The commands are "lex H5LTanalyze.l" and "yacc -d H5LTparse.y". Detailed document will be added later. Platforms tested: h5committest and fuss. Misc. update: MANIFEST
* [svn-r11674] Description:Albert Cheng2005-11-021-0/+2
| | | | | | | | Added messages to remind platform watchers to check for processes still running in the remote machine after timeout. Platforms tested: Just eyeballed. Changes is trivial.
* [svn-r11672] Purpose:Albert Cheng2005-11-022-1/+7
| | | | Added more Windows binary file types and exempted file.
* [svn-r11668] Purpose:James Laird2005-11-012-16/+17
| | | | | | | | | | | | | | Copyright fix Description: Added a blank line so that Automake would put the copyright at the top of the file. Platforms tested: Trivial change Misc. update:
* [svn-r11667] Purpose:Albert Cheng2005-11-014-34/+40
| | | | Updated the copyright notices.
* [svn-r11666] Purpose:Fang Guo2005-11-0111-1/+135
| | | | | | | | | | | Add in copyright notice Description: Solution: Platforms tested: Misc. update:
* [svn-r11664] Purpose:Albert Cheng2005-11-011-1/+0
| | | | Forgot to remove a debug echo statment. Fixed.
* [svn-r11663] Purpose:Fang Guo2005-11-011-0/+15
| | | | | | | | | | | Add copyright notice Description: Solution: Platforms tested: Misc. update:
* [svn-r11661] Purpose:Fang Guo2005-11-011-3/+15
| | | | | | | | | | | add in copyright notice Description: Solution: Platforms tested: Misc. update:
* [svn-r11660] Purpose:Fang Guo2005-11-014-2/+50
| | | | | | | | | | | add in copyright notice Description: Solution: Platforms tested: Windows XP Misc. update:
* [svn-r11659] Purpose:Fang Guo2005-11-013-2/+38
| | | | | | | | | | | Add in copyright notice Description: Solution: Platforms tested: Windows XP Misc. update:
* [svn-r11658] Purpose:Fang Guo2005-11-013-0/+36
| | | | | | | | | | | add in copyright information Description: Solution: Platforms tested: Windows XP Misc. update:
* [svn-r11657] Purpose:Fang Guo2005-11-013-0/+39
| | | | | | | | | | | Add copyright information Description: Solution: Platforms tested: Windows XP Misc. update:
* [svn-r11656] Purpose:Fang Guo2005-11-0114-2/+183
| | | | | | | | | | | Add in copyright information Description: Solution: Platforms tested: Windows XP Misc. update:
* [svn-r11655] Purpose:James Laird2005-11-012-4/+16
| | | | | | | | | | | | | Bug fix Description: Fixed a bug when using h5fc and h5c++ with static libraries. Added high-level C++ and Fortran libraries to h5c++ and h5fc. Solution: Platforms tested: mir, heping, shanti, sleipnir
* [svn-r11654] Added copyright notice as an example.Albert Cheng2005-11-011-0/+12
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* [svn-r11652] Purpose:Albert Cheng2005-11-011-3/+18
| | | | | | | | | | | | | | | | | | Improvement Description: The copyright notice of some files may contain some white spaces such as tabs, trailing blanks and \r (common in Windows files). Diff will flag them as not matching. Could not just use -b or -w of diff because it will ignore embedded spaces and could not handle \r anyway. Solution: Added a RINSE function will remove all \r and trailing spaces and expand tabs to proper number of spaces. Now, diff can compare without worry of cosmetic white spaces. Platforms tested: heping, applying on a Windows/copy_hdf.bat file.
* [svn-r11648] Purpose:Albert Cheng2005-11-012-3/+44
| | | | | | | | | | | Feature Description: Added copyright detection for Windows files, *.dsw, *.dsp, *.zip (these are ignored), and *.bat files. Platforms tested: heping.
* [svn-r11646] Purpose:James Laird2005-10-3141-165/+660
| | | | | | | | | | | | | | | | | | Bug fix/feature Description: Added support for -shlib in h5fc and h5c++. Made check-install use -shlib when only shared libraries have been installed. Solution: h5fc and h5c++ didn't recognize -shlib. Stole code from h5cc to link against shared libraries. When static libraries are disabled, the examples Makefiles will automatically use the -shlib option to link against shared libraries. Thus, --disable-static and make check-install should work together. Platforms tested: heping(disable-static, enable-static, fortran, c++), modi4 (disable-static, fortran, c++, parallel, enable-static)
* [svn-r11642] Updated.Albert Cheng2005-10-311-0/+1
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* [svn-r11641] Purpose:Albert Cheng2005-10-311-0/+58
| | | | | | | | | | | | New feature Description: A tool to fix configure file so that it can launch configure testing executable via the proper launching command, e.g., yod. (Thus the name yodconfigure is used.) Tested: Red Storm, both parallel and serial configure.
* [svn-r11639] Purpose:Albert Cheng2005-10-311-1/+2
| | | | | | | | | | Cleanup Description: Removed the redundent use of -Minform,warn which is the default anyway. Platforms tested: Heping with pgi compilers.
* [svn-r11638] Purpose:Albert Cheng2005-10-311-2/+2
| | | | | | | | | | | | | | | | | | | Bug fix. Description: PGI v6.0-5 pgf90 compiler has a bug in Mstandard that caused compiling of legal logical value to fail. We also have second thought of imposing -Mstandard and -Mdclchk on users since these flags are included in h5fc. Solution: Removed -Mstandard until we can fix the v6.0-5 compiler error and moved -Mdclchk to DEBUG_FFLAGS so that it is used during development mode but not imposed on users for production release. Platforms tested: heping: production and development mode using v6.0-4 compiler. mir: production and development mode using v6.0-4 compiler.
* [svn-r11632] Purpose:Albert Cheng2005-10-311-8/+15
| | | | | | | | | | | Bug fix. Description: chkcopyright has been changed to return an exit code whether it passes or not. Changed the detection accordingly. Platforms tested: heping.
* [svn-r11627] Purpose:Albert Cheng2005-10-301-6/+18
| | | | | | | improvement. Description: It records passed files and reports numbers of both passed and failed files.
* [svn-r11626] Purpose:Albert Cheng2005-10-291-0/+3
| | | | Skip the copyright file itself.
* [svn-r11624] Purpose:Albert Cheng2005-10-291-1/+5
| | | | | | | Added *.jpg and *.hdf5 as binary data files to be ignored. Platforms tested: heping.
* [svn-r11622] Purpose:Albert Cheng2005-10-291-0/+3
| | | | | | | | | | Improvement. Description: Added knowledge to recognized an HTML file by its content by looking for <html> tag. Platforms tested: heping.
* [svn-r11619] Purpose:Quincey Koziol2005-10-2912-6/+176
| | | | | | | | | | | Update copyrights. Description: Solution: This should address almost all of the "simple" cases in the repository. There's still work to do, but it's going to require actually thinking about the files in question instead of just copying & pasting.
* [svn-r11614] Frank Baker2005-10-2843-43/+43
| | | | | | | Description: Correct typo in copyright notice. Platforms tested: Ran hdf5/bin/chkcopyright without errors.
* [svn-r11612] Purpose:James Laird2005-10-2735-35/+35
| | | | | | | | | | | | | Bug fix Description: Failed parallel tests now cause make to exit with an error. Solution: Edited config/conclude.am to throw an error if parallel test programs fail. Platforms tested: heping, modi4
* [svn-r11611] Purpose:Fang Guo2005-10-261-1/+23
| | | | | | | | | | | Maintenance on Windows Description: Add new h5diff test into batch file difftest.bat Solution: Platforms tested: Windows XP Misc. update:
* [svn-r11610] Purpose:Albert Cheng2005-10-264-31/+47
| | | | | | | | | | | | | | | | | | | | | | | | Bug fix. Description: The previous way of detecting the MPICH version fails if the suspected $CC does not give the expected MPICH version information. Though no consequence, it generates error messages that alarm users. Also, mpich2 gives the version information as if it were mpich v1.0.2 which was incorrectly included as an earlier version of the origianl mpich. Solution: Implemented a more robust code to detect the version and narrow the recognition down to v1.2.0-v1.2.5. Also, the code were duplicated in two files (linux-gnulibc1 and ia64-linux-gnu). Combined them into a new file called mpich. Platforms tested: Tested in heping using mpicc and mpich2/mpicc and also in tg-ncsa. Misc. update: Updated MANIFEST.
* [svn-r11607] Purpose:Pedro Vicente Nunes2005-10-263-3/+11
| | | | | | | | | | | | | | | | | new h5diff test Description: added a test to the test h5diff script that compares a file to itself. this test is done to test some features of the library that open the same file and the root group twice Solution: Platforms tested: linux solaris Misc. update:
* [svn-r11603] Purpose:James Laird2005-10-251-2/+0
| | | | | | | Bug fix Description: Updated MANIFEST. Sorry!
* [svn-r11602] Purpose:James Laird2005-10-2440-488/+11
| | | | | | | | | | | | Bug fix Description: Removed detection of pdb from configure.in as a corollary to removal of pdb2hdf5 tool. Platforms tested: mir, modi4
* [svn-r11601] Purpose:James Laird2005-10-247-705/+64
| | | | | | | | | | | | | | | | | Added additional targets to build-all Description: Surveyed files to find out which ones are not built. Added test/space_overflow and perform/benchpar to programs built with --enable-build-all. Discovered that tools/misc/pdb2hdf5 and tools/misc/h5import were obsolete and deleted them. Platforms tested: mir, modi4, sol Misc. update: Update of release file and removal of --enable-pdb2hdf5 to follow.
* [svn-r11598] Purpose:Quincey Koziol2005-10-222-15/+5
| | | | | | | | | | | | Code cleanup Description: Take out odd definition of HDalarm() and replace with standard macro like the rest of the library. Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r11596] Purpose:Quincey Koziol2005-10-2213-1/+160
| | | | | | | | | | | Update copyrights Description: Updated copyright information in hdf5/bin and top-level and added some more files to be skipped to the chkcopyright config file. Platforms tested: None - just eyeballed
* [svn-r11593] Purpose:Quincey Koziol2005-10-2112-586/+294
| | | | | | | | | | | | Code cleanup Description: Clean up & standardize a bit in preparation for coding standards discussion. Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r11592] Frank Baker2005-10-2144-0/+567
| | | | | | | | Description: Add source code copyright notice; comment symbols vary by type of file. Platforms tested: No changes that should cause any problems. Nonetheless, the tree will be checked out fresh and tests run immediately post-commit.
* [svn-r11591] Purpose:Albert Cheng2005-10-214-435/+0
| | | | Removed because these were committed by mistakes.
* [svn-r11590] Purpose:James Laird2005-10-203-41/+14
| | | | | | | | | | | | | | Bug fix Description: test/gen_new_fill.c used some old APIs that didn't compile with the current library. Brought it up-to-date. Some other files (test/gen_old_*) are designed to be compiled only with older versions of the library. Removed rules to try to build them in the current Makefiles. Platforms tested: mir
* [svn-r11584] Purpose:Pedro Vicente Nunes2005-10-196-6/+449
| | | | | | | | | | | | | | | | | | | | | | | | bug fix Description: an assertion after the search for objects was saying that the number of objects in file should be > 0 removed it, since there can be a case where the number of objects is 0. in this case this was found by a case where zlib was not present and the output file was not written any objects to note: this was only detected on the windows batch files, that do not have a conditional condition to not run tests when a filter is not present Solution: Platforms tested: linux Misc. update:
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