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* [svn-r8707] Changed the way HDF5 handles hid_t's and added API functions to ↵James Laird2004-06-1819-408/+1406
| | | | allow users to register IDs and ID types at runtime.
* [svn-r8706] *** empty log message ***Raymond Lu2004-06-181-0/+196
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* [svn-r8705] Purpose: Bug fix and new test.Raymond Lu2004-06-181-1/+1
| | | | | | | | | | Description: This is an enhancement after a user reported data writing failure for array datatype of compound type with variable-length type in the v1.6 branch. Solution: Added new test and ran with Purify. Fixed memory errors and leaks in H5Tconv.c. Platforms tested: h5committest
* [svn-r8704] *** empty log message ***Raymond Lu2004-06-174-21/+19
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* [svn-r8703] Purpose: bug fixRaymond Lu2004-06-171-48/+42
| | | | | | | | | Description: After I added H5S_NULL dataspace to dumper test, the output violate XML schema for attribute data. Solution: changed. Platforms tested: RH8(fuss), minor change, only dumper is involved.
* [svn-r8702] Purpose: Bug fix.Raymond Lu2004-06-171-1/+1
| | | | | | | | | Description: After I added H5S_NULL dataspace dumper test, the output didn't match XML schema for attribute data. Solution: changed. Platforms tested: RH 8(fuss), only dumper is involved, minor change.
* [svn-r8698] Purpose:Xuan Bai2004-06-161-0/+0
| | | | | | | | | | | | | | | Update. Description: Update toolslib and toolslibD projects in Windows. Solution: Add new source file h5tools_ref.c and head file h5tools_ref.h into toolslib and toolslibD projects. Platforms tested: Windows XP/Visual C++ 6.0 and .NET. Misc. update:
* [svn-r8696] Purpose:Quincey Koziol2004-06-164-19/+54
| | | | | | | | | | | | | | | | | Code optimizations Description: Eliminate memset() call in H5S_set_extent_simple(). Use malloc() instead of calloc in H5B<mumble>. Change global heap code to track heap objects that are in use in order to allocate new objects more quickly and also to avoid memset() and calloc() calls. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r8694] Purpose:Quincey Koziol2004-06-151-1/+2
| | | | | | | | | | | | Code optimization Description: Avoid memcpy() when setting up new chunk coordinates Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r8692] Purpose:Quincey Koziol2004-06-154-14/+18
| | | | | | | | | | | | | Code optimization Description: Avoid making copy of default vlen allocation info when default DXPL is used. Just retarget pointer to point to default info directly. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r8690] Purpose:Quincey Koziol2004-06-151-1/+16
| | | | | | | | | | | | Code optimization Description: Be smarter about copying hyperslab selection data and avoid memcpy() calls. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r8688] Purpose:Pedro Vicente Nunes2004-06-154-5/+8
| | | | | | | | | | | | | | | | h5dump new feature Description: add processing of tab characters (in the context of the new option process CR/LF) Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8686] Purpose:Quincey Koziol2004-06-144-29/+39
| | | | | | | | | | | | | Code optimization Description: Eliminate memcpy() when using default DXPL by pointing at existing default object, instead of copying it. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r8683] Purpose:Quincey Koziol2004-06-1417-578/+545
| | | | | | | | | | | | | Code optimization Description: Use 'size_t' instead of 'hsize_t' to track the number of elements in memory buffers, especially for type conversion. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r8681] Purpose: Take out an unnecessary stepRaymond Lu2004-06-141-4/+0
| | | | | | | | | Description: I put H5T_lock in H5T_open in last checkin but found it's unnacessary. Solution: Took it out. Platforms tested: RH 8(fuss). Simple change.
* [svn-r8679] Purpose:Quincey Koziol2004-06-141-16/+31
| | | | | | | | | | | | | Code optimization Description: Detect when a default property list is being used and just copy over the default VL allocation properties, instead of querying for them. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r8677] Purpose:Quincey Koziol2004-06-1410-295/+194
| | | | | | | | | | | | | | | | | | | Code cleanup & optimization Description: Remove old structures that used a union to store information about the dataspace extent and just store the information directly in the dataspace extent itself. Remove ifdef'd references to permutation ordering in dataspaces. We'll definitely need more than this code if/when we implement this feature. Change allocation of dataspace information from calloc() to malloc(). Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r8675] Purpose:Quincey Koziol2004-06-132-28/+7
| | | | | | | | | | | | | Code optimization Description: Using existing dataspace extent copying routine instead of duplicating the code (more slowly). Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r8673] Purpose:Quincey Koziol2004-06-1316-546/+626
| | | | | | | | | | | | | | | | | | Code optimization Description: Revised dataspace selections to use a more "object oriented" mechanism to set the function pointers for each selection and selection iterator. This reduces the amount and number of times that dataspace selection info has to be copied. Additionally, change hyperslab selection information to be dynamically allocated instead of an inline struct. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r8672] Snapshot version 1.7 release 28HDF Admin2004-06-136-17/+27
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* [svn-r8670] Purpose:Quincey Koziol2004-06-133-16/+128
| | | | | | | | | | | | | Code optimization Description: Avoid a memory copy by directly reading from the variable-length sequence buffer when there is no type conversion on the way to disk. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r8668] Purpose:Quincey Koziol2004-06-131-54/+63
| | | | | | | | | | | | | | Code optimization Description: Avoid running conversion routine when it's a noop. Also, pick a minimum size for the variable-sized sequence conversion buffer, instead of allocating lots of small buffers. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel
* [svn-r8666] Purpose:Quincey Koziol2004-06-133-165/+147
| | | | | | | | | | | | | | Code optimization Description: Restructure conversion loop of variable-length objects to avoid walking through memory backwards and allocating as many temporary buffers. (This uses the optimized method used in the atomic type conversions) Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r8664] Purpose:Quincey Koziol2004-06-126-30/+426
| | | | | | | | | | | | | | Code optimization Description: Allow global heap collections to grow in size (up to a 64K limit) if they are able to. This allows them to grow to a more reasonable size than the 4K minimum size. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r8661] Purpose: Add comments.Raymond Lu2004-06-111-2/+4
| | | | | | | Description: More comments to clarify action. Platforms tested: No code change, no test.
* [svn-r8659] Purpose:Pedro Vicente Nunes2004-06-112-7/+2
| | | | | | | | | | | | | | | | | bug fix Description: a prototype for a new function used by h5tools_str.c was accidently left in that file the c++ treats this as an error Solution: removed the prototype, and pointed to the correct one (in h5tools_ref.h ) Platforms tested: Free BSD (c++) linux Misc. update:
* [svn-r8656] Purpose:Quincey Koziol2004-06-112-10/+6
| | | | | | | | | | | | | Code optimization Description: Eliminate redundant memory allocation for type conversion of variable-length sequences. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r8655] Purpose:Quincey Koziol2004-06-112-4/+5
| | | | | | | | | | | Code cleanup Description: Add more files that should be removed to the clean & distclean targets. Platforms tested: FreeBSD 4.10 (sleipnir) Too minor to require h5committest
* [svn-r8653] Purpose:Pedro Vicente Nunes2004-06-104-3/+22
| | | | | | | | | | | | | | | | bug fix Description: the file tfilters.h5 was missing the szip dataset, due to a absent szip configuration when it was generated Solution: generated it it again with szip on Platforms tested: linux (smalll change ) Misc. update:
* [svn-r8651] Purpose:Quincey Koziol2004-06-101-3/+3
| | | | | | | | | | | Code optimization Description: Eliminate redundant memset() when creating chunk map structure. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel
* [svn-r8648] Purpose:Quincey Koziol2004-06-102-14/+6
| | | | | | | | | | | | | Code optimization Description: Eliminate some operations through temporary variables in H5F_addr_encode. Eliminate some redundant memset()'s of structures that will be completely overwritten in the variable-length datatype code. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel
* [svn-r8647] Purpose:Pedro Vicente Nunes2004-06-1013-681/+347
| | | | | | | | | | | | | | h5dump update Description: updated the h5dump test files generator , so that it coincides with the 1.6 branch Solution: Platforms tested: linux (small) Misc. update:
* [svn-r8646] *** empty log message ***Raymond Lu2004-06-104-5/+227
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* [svn-r8645] Purpose: bug fixRaymond Lu2004-06-101-0/+2
| | | | | | | | | | | | | Description: If compound datatype has variable-length string as field, after it's committed to the file, when it's reopened, the size of the datatype is miscalculated. It makes the data unreadable. Dumper also fails to read data because of this problem. Solution: Change the size of datatype when it's committed to file. Then modify the size again for memory type when it's reopened. Platforms tested: h5committest and RH 8. Misc. update: RELEASE.txt
* [svn-r8644] Purpose: h5dump new featuresPedro Vicente Nunes2004-06-1025-43/+1108
| | | | | | | | | | | | | | | | | | | | | | | Description: added the code for print strings with new line and display the path of references (new source files h5tools_ref.c and .h ) added a test suite in testh5dump.sh.in for ( note : to create testh5dump.sh , one must redo ./configure; this detects the availability of filters and generates testh5dump.sh accordingly) 1) storage layout 2) fill value 3) print reference with path 4) print strings with new lines 5) filters Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8639] Purpose:Quincey Koziol2004-06-091-1/+1
| | | | | | | | | | | | Code optimization Description: Call malloc() instead of calloc() for data structure that we completely initialize. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel
* [svn-r8638] Purpose:Xuan Bai2004-06-091-0/+0
| | | | | | | | | | | | | | | | | | | | | Update Description: 1. Update Windows project files as Quincey Koziol renamed several files in CVS. 2. Update the hdf5 test batch files. Solution: 1. Quincey renamed the following files in CVS: H5Fcompact.c -> H5Dcompact.c H5Fcontig.c -> H5Dcontig.c H5Fistore.c -> H5Distore.c H5Fseq.c -> H5Dseq.c hdf5, hdf5dll, and hdf5_cf90stub project files were updated to reflect the change. 2. H5dump, h5diff, h5ls, h5import, and h5repack test batch files were updated. Now the output from these batch files will show whether each test passes or fails. Platforms tested: Windows XP/Visual C++ 6.0 Misc. update:
* [svn-r8636] Purpose:Quincey Koziol2004-06-091-37/+65
| | | | | | | | | | | | Code optimization Description: Don't allocate conversion buffer larger than the user's buffer. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel too minor to require h5committest
* [svn-r8635] Purpose:Quincey Koziol2004-06-091-1/+1
| | | | | | | | | | | Bug fix Description: Correct path to new testh5dump.sh, now that it's generated. Platforms tested: FreeBSD 4.10 (sleipnir) w & w/o srcdir Too minor to require h5committest
* [svn-r8632] Purpose:Quincey Koziol2004-06-091-2/+10
| | | | Update release notes
* [svn-r8630] Purpose:Quincey Koziol2004-06-091-1/+0
| | | | | | | | | | | | | | | | | Bug fix Description: Correct potential file corruption from mis-setting the metadata accumulator address. (Bugfix contributed by Sean Monner <seanm@quadrus.com>) Solution: When the new metadata overlaps with the end of the metadata accumulator and the accumulator grows in size, don't reset the address of the accumulator, since it hasn't moved. Platforms tested: FreeBSD 4.9 (sleipnir) too minor to require h5committest
* [svn-r8627] Purpose:Quincey Koziol2004-06-094-3/+34
| | | | | | | | | | | | Update shell scripts Description: Switch to generating the testh5dump.sh script at configure time, so we can determine which filters are available to test. Platforms tested: FreeBSD 4.9 (sleipnir) too small to require h5committest
* [svn-r8625] Purpose:Quincey Koziol2004-06-082-4/+38
| | | | | | | | | | | | | | | Code optimization Description: Avoid pushing errors on error stack when an object is not found in a B-tree. Sometimes we are just checking if the object exists before we insert it into the B-tree and the higher levels in the library should be responsible for determining if not finding the object in B-tree is really an error. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel too minor to require h5committest
* [svn-r8623] Purpose:Quincey Koziol2004-06-081-6/+17
| | | | | | | | | | | | | Code optimization Description: Use default dataset transfer property list for internal metadata I/O operations when parallel I/O is disabled. This avoids multiple copies of the properties being made when the information is not needed. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) w/parallel)
* [svn-r8622] Purpose:Pedro Vicente Nunes2004-06-0752-1649/+2977
| | | | | | | | | | | | | | | | | | | | | | | | | h5dump new version Description: added the changes already made for 1.6 support for dumping of 1) filters 2) storage layout 3) fill value 4) comments 5) superblock 6) file contents 7) array indices Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8620] Snapshot version 1.7 release 27HDF Admin2004-06-067-16/+21
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* [svn-r8618] Purpose:Quincey Koziol2004-06-057-444/+576
| | | | Fix makefiles, dependencies & manifest after source file rename.
* [svn-r8616] Purpose:Quincey Koziol2004-06-054-4526/+0
| | | | | | | | Rename these files Description: Since these files contain functions that are part of the dataset information now, rename them to H5D<foo>.c
* [svn-r8614] Purpose:Quincey Koziol2004-06-052-3/+7
| | | | | | | | | | | | | | | Refactor code Description: Move chunk and contiguous cached raw data from file information to dataset information. This simplifies a number of internal interfaces, aligns the code with it's purpose better and should allow more optimizations to the chunked data I/O performance. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) h5committest
* [svn-r8613] Purpose:Quincey Koziol2004-06-0521-2132/+2146
| | | | | | | | | | | | | | | | | Refactor code Description: Move chunk and contiguous cached raw data from file information to dataset information. This simplifies a number of internal interfaces, aligns the code with it's purpose better and should allow more optimizations to the chunked data I/O performance. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) h5committest Misc. update:
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