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* [svn-r3881] Purpose:Albert Cheng2001-05-012-28/+173
| | | | | | | | | | | | Feature Description: The allocation by alignment (H5Pset_alignment) feature code somehow got dropped in some 1.3.x version. Solution: Re-implemented it with "new and improved" algorithm. It keeps track of "wasted" file-fragment in the free-list too. Platforms tested: modi4(parallel).
* [svn-r3880] Purpose:Bill Wendling2001-05-011-22/+20
| | | | | | Documented Bug Fix Description: Documented the fix for the Linux --enable-static-exec bug.
* [svn-r3877] Purpose:Bill Wendling2001-04-301-1/+1
| | | | | | | | | | | Update Description: On further discussion with Albert and Quncey, it was decided to keep the original "unsignedness" of the nkeys variable. Solution: Changed the type from intn to uintn. Platforms tested: Linux
* [svn-r3875] Purpose:Bill Wendling2001-04-301-1/+1
| | | | | | | | | | | | | | | | Bug Fix Description: The --enable-static-exec flag was failing on Linux systems. The reason: a "long long" type was growing by some obscene amount if you just add 1 to it (tis truth!). In one statement, it prints out the correct value. Add one to it and print it out in the next statement and it gives you a very large number. This would, in turn, cause the resulting memcpy to fail... Solution: Changed the variable from "hsize_t" to "intn" which is what the field it's getting is typed anyway. Platforms tested: Linux
* [svn-r3874] Dan Wells2001-04-305-737/+1564
| | | | | | | | | | | | | | Purpose: feature Description: This brings the development version up to date with the release version. It now supports Pablo tracing of MPI-I/O calls from MPI-I/O versions which are not totally compliant with the standars. Solution: Added entries to bypass the current MPI-I/O tracing in the Pablo Trace Library. Platforms tested: IRIX64/Solaris/IBM SP2
* [svn-r3873] Elena Pourmal2001-04-291-2/+2
| | | | | | | | Purpose: Maintenace Description: Added new files ./fortran/src/h5_f.c and ./fortran/src/h5_ff.f90 and removed old ones (h5f.c and h5ff.f90)
* [svn-r3872] Elena Pourmal2001-04-293-2/+14
| | | | | | | | | | | | | | | Purpose: Windows port Description: Names of the H5f.c and H5ff.f90 files caused problems on Windows98. Compilation of H5F.c (C Library) and H5Ff.f90 (Fortran library) as compilation of H5f.c and H5ff.f90 creates the same H5F.o and H5FF.o file names and linking stage fails. Solution: Rename the files to H5_f.c and H5_ff.f90 Platforms tested: Linux (eirene) and Windows98
* [svn-r3871] MuQun Yang2001-04-281-2/+4
| | | | | | | | | | | | | Purpose: Add definations of two new functions Description: Solution: Platforms tested: eirene [machines you have tested the changed version. This is absolute important. Test it out on at least two or three different platforms such as Big-endian-32bit (SUN/IRIX), little-endian-32(LINUX) and 64-bit (IRIX64/UNICOS/DEC-ALPHA) would be good.]
* [svn-r3870] MuQun Yang2001-04-281-1/+8
| | | | | | | | | | | | | | Purpose: Add a constant(compression level for gzip) Description: For compression issue Solution: Platforms tested: eirene [machines you have tested the changed version. This is absolute important. Test it out on at least two or three different platforms such as Big-endian-32bit (SUN/IRIX), little-endian-32(LINUX) and 64-bit (IRIX64/UNICOS/DEC-ALPHA) would be good.]
* [svn-r3869] MuQun Yang2001-04-281-3/+12
| | | | | | | | | | | Purpose: a bug fix Description: User can define "Real Vdata" as user-defined attribute. By using VSisattr, we can check this out. In order to keep this piece of information, We use "Vdata attribute" in the converted HDF5 file to distingush this kind of Vdata from independent Vdata. Solution: see above Platforms tested: eirene(Linux)
* [svn-r3868] MuQun Yang2001-04-281-1/+1
| | | | | | | | | | | | Purpose: a bug fix Description: When Vsisattr is true, this Vdata still needs to be converted as an independent real "Vdata", We will add object type of this vdata as "Vdata attribute". Solution: erease the evaluation of Vsisattr call. Platforms tested: Linux(eirene)
* [svn-r3867] MuQun Yang2001-04-281-310/+830
| | | | | | | | | | | | | | | | | | | | | | Purpose: bug fix Adding more features Description: Bugs: 1) hdf4 dimensional scale data can be none, but the dim name can still defined by users, so number of hdf4 dimensional names and number of object reference may be different Previously, this problem is not considered. 2) SDcheckempty will return true when fill value is set to HDF4 SDS, and then fill value information is lost 3) check whether SDS have fill value set although SDcheckempty return true. Use H5Psetfillvalue and H5Dcreate in HDF5 part, still needs to wait for the new development of HDF5 and also need to investigate whether this part of code has bugs. New features: compressed SDS will get compressed with gzip when it is converted. That will save some space. [describe the bug, or describe the new feature, etc] Solution: See above and design document Platforms tested: eirene(linux) [machines you have tested the changed version. This is absolute important. Test it out on at least two or three different platforms such as Big-endian-32bit (SUN/IRIX), little-endian-32(LINUX) and 64-bit (IRIX64/UNICOS/DEC-ALPHA) would be good.]
* [svn-r3866] Purpose:Bill Wendling2001-04-271-1/+1
| | | | | | | | | | Bug Fix Description: "make distclean" was removing the .h5 file. Solution: Stopped it from doing that. Platforms tested: Linux
* [svn-r3865] Purpose:Bill Wendling2001-04-271-4/+4
| | | | | | | | | | Bug Fix Description: The "-$(RM)" was failing for make distclean. Solution: Removed the "-". Platforms tested: Linux
* [svn-r3864] Purpose:Bill Wendling2001-04-272-7/+7
| | | | | | | | | | | Bug Fix Description: The "-$(RM)" flags were causing error messages when doing a make distclean. Solution: Removed the "-" from the beginning. Platforms tested: Linux
* [svn-r3863] Elena Pourmal2001-04-271-0/+8
| | | | | | | Purpose: Maintenance Description: Added info about Windows port and F90 APIs changes.
* [svn-r3862] Elena Pourmal2001-04-2710-34/+73
| | | | | | | | | | | Purpose: Codemaintenance Description: read/write APIs have been changed. Solution: Made necessary changes to the source code. Platforms tested: Linux, Solaris 2.7, O2K, T3E
* [svn-r3861] Elena Pourmal2001-04-2711-60/+126
| | | | | | | | | | | Purpose: Code maintenance Description: read/write APIs have been changed. Solution: Made necessary changes to the tests. Platforms tested: Windows 98, Linux, Solaris 2.7, O2K, T3E
* [svn-r3860] Elena Pourmal2001-04-2716-965/+3251
| | | | | | | | | | | | | | | | | | | | | | Purpose: Windows port Description: Multiple changes: * Windows platforms require special compiler directives in order to create DLLs. * In read/write subroutines data arrays were passed by descriptor. This worked on UNIX but did not work on Windows. Solution: * added compiler directives. * read/write APIs have been changed. There is an additional parameter (array that contains the sizes of data buffer dimensions) and regular arrays are used instead of assumed-shaped arrays. Platforms tested: * Currently this feature does not work. Common blocks are not exported correctly from one F90 module to another. I am checking this in so I can ask DEC for help. * For static library tests passed on Windows 98 ( except flush2_fortran) All tests passed on Linux, Solaris 2.7, O2K and T3E
* [svn-r3859] Elena Pourmal2001-04-272-0/+1
| | | | | | | | | | Purpose: Windows F90 port Description: all_withf90.zip file conyains all necessary projects to build and test HDF5 library (both C and F90) on Windows platforms Platforms tested: Windows 98
* [svn-r3857] Purpose:Bill Wendling2001-04-261-1/+1
| | | | | | | | | | | Bug Fix Description: For parallel compiles, it needed the libtest.so library and wasn't finding it. Solution: Added the path to the library to the rpath in the ltmain.sh file. Platforms tested: Modi4
* [svn-r3856] Purpose:Bill Wendling2001-04-241-0/+4
| | | | | | Update Description: Added the new testfiles.
* [svn-r3854] Purpose:Bill Wendling2001-04-241-1/+1
| | | | | | | | | | Bug FIx Description: Fix to look in the src/.libs directory when in the tools directories. Solution: Added .libs to the rpath. Platforms tested: Linux
* [svn-r3853] Purpose:Bill Wendling2001-04-245-0/+106
| | | | | | | | Adding Tests Description: Added tests for the h5dump subsetting feature. Platforms tested: Linux
* [svn-r3850] Updated for the added file.Albert Cheng2001-04-241-0/+1
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* [svn-r3848] Purpose:Albert Cheng2001-04-241-14/+24
| | | | | | updated to v1.4 API. Platforms tested: Eyeballed modi4.
* [svn-r3846] Description:Albert Cheng2001-04-241-1/+1
| | | | | | updated revision date. Platforms tested: modi4 (serial and parallel)
* [svn-r3842] Purpose:Albert Cheng2001-04-242-1/+1024
| | | | | | | | | | | New feature Description: Added a parallel HDF5 example. make check knows how to run it in serial mode but not in parallel mode since the current makefile has no provision for parallel code execution. One would have to do it by hand (e.g., mpirun -np 2 ./ph4example) Platforms tested: modi4 (serial and parallel)
* [svn-r3841] Purpose:Bill Wendling2001-04-241-1/+1
| | | | | | | | | | Oops Description: An "if" was capilalized for some reason. Solution: Changed it from If to if. Platforms tested: Linux
* [svn-r3840] Purpose:Bill Wendling2001-04-241-2/+2
| | | | | | | | | | | | small bug fix Description: If specifying --stride, it was checking for the wrong short-form of the command-line parameters. Solution: Changed the 'T' to 'S' which is the new short form for the stride option. Platforms tested: Linux
* [svn-r3839] Purpose:Bill Wendling2001-04-241-1/+5
| | | | | | | | | | | Bug Fix... Description: For the tools library, it needed to find the HDF5 library in the `pwd`/../../src directory. Solution: Added `pwd`/../../src to the rpaths. Platforms tested: Modi4
* [svn-r3838] Purpose:Bill Wendling2001-04-241-13/+4
| | | | | | | | | | | | | | | | | | | | | | (Final?) Bug Fix Description: Okay, for those of you following this saga: Shared libraries weren't being found on the O2K system. Why not? Well, turns out that libtool is dain bramaged. Instead of creating executables for executables, it creates shell scripts. These shell scripts actually recompile the code, relinking it with the "correct" libraries. It's similar to when it goes to do an install. It recompiles to the binary so that it picks up the proper libraries. BUT! Libtool wasn't placing into the shell scripts where the shared libraries it was looking for actually were. Solution: I hacked up ltmain.sh so that it puts the required dynamic library directories into the compile line when it creates the shell-script/binaries. Platforms tested: Modi4...
* [svn-r3837] Purpose:Quincey Koziol2001-04-231-0/+2
| | | | | | Document bug fix. Description: Documented non-zero userblock bug fix.
* [svn-r3833] Purpose:Quincey Koziol2001-04-231-0/+32
| | | | | | | | | More tests Description: Added test to verify non-zero userblocks working correctly with dataset I/O code. Platforms tested: FreeBSD 4.3 (hawkwind)
* [svn-r3832] Purpose:Quincey Koziol2001-04-232-22/+66
| | | | | | | | | | | | Bug Fix. Description: Setting a non-zero userblock size was causing raw data caching code to break. Solution: Changed from using absolute end-of-address-space offsets in cache size calculations to relative offsets. Platforms tested: FreeBSD 4.3 (hawkwind)
* [svn-r3831] Purpose:Bill Wendling2001-04-221-2/+3
| | | | | | | | | | | Bug Fix Description: The fix I put in on Friday wasn't working properly. Solution: Changed some single quotes to double quotes so that the macros are expanded and set "command_finalize" to the newest values I created. Platforms tested: Modi4
* [svn-r3829] Purpose:Bill Wendling2001-04-211-1/+23
| | | | | | | | | | | | Bug Fix Description: The compiler on Modi4 (and possibly other machines) couldn't handle a long string being passed in with the -Wl, flag. Solution: Wrote some script which separates the string being passed into multiple flags with "-Wl,-rpath -Wl," before them. Platforms tested: Modi4
* [svn-r3828] Purpose:Quincey Koziol2001-04-192-7/+7
| | | | | | | | | | Code cleanup Description: "buf" parameter to H5Awrite was missing 'const' declaration. Solution: Changed from "void *buf" to "const void *buf" Platforms tested: FreeBSD 4.3 (hawkwind)
* [svn-r3827] Purpose:Quincey Koziol2001-04-191-4/+4
| | | | | | | | | | | | | Bug fix. Description: 'make distclean' is broken on FreeBSD 4.3, with some syntax errors. I have a feeling that the make command is more picky in FBSD 4.3 than in 4.2 which is what is causing these errors to crop up now. Solution: Add missing semicolon to line in 'clean' target and take out bogus '-'s in front of "$(RM)" commands which are already in if's Platforms tested: FreeBSD 4.3 (hawkwind)
* [svn-r3824] Frank Baker2001-04-1817-17/+27
| | | | | | | | Purpose: Update "Describes HDF5 Release..." footer from R1.4 to "Release 1.5, Unreleased Development Branch" Platforms tested: IE 5
* [svn-r3823] Frank Baker2001-04-1838-38/+38
| | | | | | | | Purpose: Update "Describes HDF5 Release..." footer from R1.4 to "Release 1.5, Unreleased Development Branch" Platforms tested: IE 5
* [svn-r3822] Frank Baker2001-04-1838-41/+49
| | | | | | | | Purpose: Update "Describes HDF5 Release..." footer from R1.4 to "Release 1.5, Unreleased Development Branch" Platforms tested: IE 5
* [svn-r3821] Frank Baker2001-04-181-895/+699
| | | | | | | | | | | | | | | Purpose: Repair damaged HTML coding (caused by the Netscape editor) and restore additions since that damage occured. Add h5dump subsetting material. Description: Reverted to earlier version to restore HTML coding. Re-entered h5dump XML material and explanatory comment re h5dump flag parameters. Added h5dump subsetting material. Other editing and formatting within h5dump description. Platforms tested: IE 5
* [svn-r3818] Purpose:Albert Cheng2001-04-181-26/+18
| | | | | | | | | | | | | Bug fix and clean up. Description: The part that should test 4GB was actually testing 2GB due to typo. Solution: Corrected the typo to use 4GB constant. Rearranged the code to group 2GB and 4GB tests in their own. Removed some duplicated testing code. Platforms tested: modi4.
* [svn-r3817] Frank Baker2001-04-171-3/+3
| | | | | | | | | Purpose: Label for "R 1.5, Unrelease Development Branch". Description: Changed appropriate subtitle line and appropriate footer. Platforms tested: IE 5
* [svn-r3816] Frank Baker2001-04-173-590/+635
| | | | | | | | Description: Importing Intro, ADG, and doc index changes from 1.4 release branch to 1.5 dev branch Platforms tested: IE 5
* [svn-r3814] Purpose:Bill Wendling2001-04-162-14/+28
| | | | | | | | | | | | | | | Cleanup Description: If there isn't anything to "remove" during the cleanup faze. This stops the "make clean"s from printing out: rm -f all of the time. Solution: Check if hte macros have anything in them before calling the rm. Platforms tested: Linux
* [svn-r3813] Purpose:Quincey Koziol2001-04-161-0/+2
| | | | | | Update.. Description: Add OSF5 files.
* [svn-r3812] Purpose:Albert Cheng2001-04-131-6/+15
| | | | | | | | | | | | | Improvement Description: The DIFF used to keep running after detecting significant code changes. This was done in order to see all changes but no one seems to look at the diff any more. So, let it end the DIFF cycle once it determines there are enough differences for a new test. Added "install install-doc uninstall uninstall-doc" to the test cycle. Platforms tested: Eirene, gondolin, modi4
* [svn-r3811] Purpose:Bill Wendling2001-04-131-11/+23
| | | | | | | | | | | | Update Description: If the count for a subset isn't specified, then we default to the remainder of the dataset. Solution: Check for the count to be specified. If not, then find the dimensions of the dataset and subtract from the the "start" parameter. Platforms tested: Linux