summaryrefslogtreecommitdiffstats
Commit message (Collapse)AuthorAgeFilesLines
* [svn-r18690] Description:Binh-Minh Ribler2010-05-031-0/+3
| | | | | | Added #ifndef H5_NO_DEPRECATED_SYMBOLS to getObjTypeByIdx tests. Platforms tested: amani - with --disable-deprecated-symbols
* [svn-r18687] Description:Binh-Minh Ribler2010-05-031-0/+4
| | | | | | Added notes about new functions: CommonFG::getObjTypeByIdx CommonFG::getObjnameByIdx
* [svn-r18685] Description:Binh-Minh Ribler2010-05-025-1/+90
| | | | | | | | | Added missing overloaded function getObjTypeByIdx to return type name as a char*. Platforms tested: Linux/32 2.6 (jam) FreeBSD/64 6.3 (liberty) SunOS 5.10 (linew)
* [svn-r18684] Snapshot version 1.9 release 68HDF Tester2010-05-0214-29/+29
|
* [svn-r18682] Description:Binh-Minh Ribler2010-05-023-6/+42
| | | | | | | | | Purpose: Fix bugzilla 1857 Added missing overloaded function getObjnameByIdx to take char* for name. Platforms tested: Linux/32 2.6 (jam) FreeBSD/64 6.3 (liberty) SunOS 5.10 (linew)
* [svn-r18677] Just mopped up some looseends by using the macro HDxyz instead ↵Albert Cheng2010-04-291-7/+7
| | | | | | | | the xyz function names. Tested: Jam only since this is trivial.
* [svn-r18675] Updated scripts for H5copy r18398 and H5ls r18642Allen Byrne2010-04-292-2/+54
|
* [svn-r18666] Description:Quincey Koziol2010-04-291-7/+7
| | | | | | | Switch H5Rget_obj_type to H5Rget_obj_type2. Tested on: Linux/64 2.4 (amani) w/PGI compiler
* [svn-r18664] Description:Quincey Koziol2010-04-291-4/+10
| | | | | | | | | | | | | | | | | | | | | | | Add a few H5Tequal() calls to make certain that the native datatype constructed with H5Tget_native_type() is identical to the memory datatype created from the struct in memory. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18660] Description:Quincey Koziol2010-04-282-122/+105
| | | | | | | | | Tweak H5detect to be even more careful about its actions, to allow gcc 4.5 to use '-O3'. Also, minor code cleanups in H5Tfloat.c Tested on: FreeBSD/64 6.3 (liberty) w/gcc 4.5 & production mode (h5committest not necessary/appropriate)
* [svn-r18659] Bug: 1764Albert Cheng2010-04-284-70/+222
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: longjmp do not necessary restore signal that is blocked during the signal handling. This caused the Alignment test to fail quietly, resulting in wrong alignment information which will cause failures later. Solution: One can use sigsetjmp/siglongjmp to restore signal handling but not all systems such as Cray XT or VMS supports sigsetjmp. Backup solution is to use sigprocmask to reset the signal. Again, some systems may not support it either. Added code to try the first and then the second solution. Also added tests to verify if the signal_handler routines are working properly. Finally, added code to print results of the verification (in form of comments) to H5Tinit.c for inspection in case of failure. (Note that many platforms do not have alignment limits at all and ALIGNMNET code never raise the SIGBUS or SIGSEGV errors. In those cases, it does not matter whether the signal handlers work or not. Again, this can be deduced from the results comments near the end of the H5Tinit.c. If the sum of signal handlers called equals the total of verify, it means ALIGNMENT does not raise any signals.) For configure.in and configure: Added the test for setjmp, sigsetjmp, sigprocmask which are used by the H5detec.c. Tested: htcommittested, jam(serial).
* [svn-r18657] I added some comments. No test is needed.Raymond Lu2010-04-281-2/+18
|
* [svn-r18654] Bug 1741:Allen Byrne2010-04-281-0/+173
| | | | | | | Added test of H5R package API parameters to testhdf5 test, these test only the public API parameter checks. Tested: local linux
* [svn-r18650] Description:Quincey Koziol2010-04-2739-67/+110
| | | | | | | | | | | | | | | | | | | Bring back various minor tweaks & cleanups from the revise_chunks branch. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode
* [svn-r18648] In H5T_get_native_type of H5Tnative.c, I changed the way that ↵Raymond Lu2010-04-276-32/+65
| | | | | | | | | the offset, alignment, and size of nested compound type are calculated by using H5T_cmp_offset. The old way had a bug in it (see bug #1850). Tested on jam. I tested the same change for 1.8 on amani, linew, and jam.
* [svn-r18647] I updated the default version of autoconf to 2.65 as this is ↵Raymond Lu2010-04-271-1/+1
| | | | | | the default on jam. Tested on jam.
* [svn-r18644] Add testing of H5Lcopy() and H5Lmove() between files for soft ↵Neil Fortner2010-04-271-2/+30
| | | | | | | | and external links. Tested: Fedora (too minor for commit test)
* [svn-r18642] Purpose:Jonathan Kim2010-04-272-2/+7
| | | | | | | | | | Fix for Bug 1793 - h5ls on a non-existent file gives 0 return code Description: After the fix, h5ls returns 1 (EXIT_FAILURE) if non-existent file is given. Tested: jam, amani, linew
* [svn-r18640] Description:Binh-Minh Ribler2010-04-272-10/+16
| | | | | | | | Added a null character to terminate a fixed-length string returned by H5Aread. Platforms tested: Linux/32 2.6 (jam) FreeBSD/64 6.3 (liberty)
* [svn-r18637] Description:Quincey Koziol2010-04-271-7/+10
| | | | | | | | Bring PGI compiler flags from 1.8 branch, reducing optimization level with PGI C 9.x Tested on: Linux/64 2.4 (amani) w/PGI C 9.x & 10.x
* [svn-r18634] Description:Quincey Koziol2010-04-2713-44/+400
| | | | | | | | | | | | | | | | | | | | | Clean up compiler warnings. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18632] Description:Quincey Koziol2010-04-271-0/+3
| | | | | | | Clean up memory leak in test code. Tested on: Linux/64 2.4 (amani) w/debug & valgrind
* [svn-r18630] Description:Quincey Koziol2010-04-272-351/+422
| | | | | | | | | | | | | | | | | | | | | | Fix remaining aliasing problems and enable optimizations w/gcc now. This addresses the remaining issues for Bug#1398. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18627] Description:Quincey Koziol2010-04-252-21/+14
| | | | | | | | | | | | | | | | | | | | | | | More progress toward addressing Bz#1398: add 'volatile' keyword to floating- point types when detecting their properties. Also, minor code formatting cleanups. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18625] Description:Quincey Koziol2010-04-233-602/+610
| | | | | | | | | | | | | | | | | | | | | | Checkpoint progress on Bz#1398 - strict aliasing issues. (Lots of compiler warnings & code cleanups also) Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18621] Description:Quincey Koziol2010-04-237-62/+336
| | | | | | | | Clean up compiler warnings. Tested on: Mac OS X/32 10.6.3 (amazon) w/debug (too minor to require h5committest)
* [svn-r18618] Description:Quincey Koziol2010-04-2211-243/+556
| | | | | | | | | | | | | | | | | | | | | | | | | | | Add new internal object header routines to query the header chunk that a message is in, and to lock/unlock a message into a chunk (so it doesn't get moved into another chunk during allocation/free events). Also, move dataspace message to beginning of object header messages added to a dataset's object header, so it can be locked into chunk #0 (when performing SWMR operations). Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18616] Description:Quincey Koziol2010-04-2225-52/+124
| | | | | | | | Clean up compiler warnings. Tested on: Mac OS X/32 10.6.3 (amazon) w/debug (too minor to require h5committest)
* [svn-r18614] Purpose:Jonathan Kim2010-04-226-160/+205
| | | | | | | | Fix for bug 1817 : h5copy fail to copy dangling link by specifying link path directly Tested: jam, amani, linew
* [svn-r18612] Description:Quincey Koziol2010-04-223-1919/+2117
| | | | | | | | Clean up compiler warnings & code formatting Tested on: Mac OS X/32 10.6.3 (amazon) w/debug (too minor to require h5committest)
* [svn-r18610] Description:Quincey Koziol2010-04-222-119/+121
| | | | | | | | Clean up compiler warnings & code formatting issues. Tested on: Mac OS X/32 10.6.3 (amazon) w/debug) (too minor to require h5committest)
* [svn-r18608] Description:Quincey Koziol2010-04-224-54/+65
| | | | | | | | | | | | | | | | | | | Simplify object header allocation routines, and clean up some compiler warnings. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode
* [svn-r18605] Description:Quincey Koziol2010-04-221-4/+65
| | | | | | | | Add new warning flags for gcc 4.5.x Tested on: FreeBSD/32 6.3 (duty) w/gcc 4.5 FreeBSD/64 6.3 (liberty) w/gcc 4.5
* [svn-r18600] Description:Quincey Koziol2010-04-206-31/+37
| | | | | | | | | | | | | | | | | | | | | | | Increment reference count on object header when "fake" object header chunk proxy is returned from H5O_chunk_protect(). Also, clean up the interface to H5O_chunk_unprotect by removing the unnecessary 'oh' parameter. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18597] Description:Quincey Koziol2010-04-201-2/+2
| | | | | | | | | | | | | | | | | | | Fix missing NULL initialization of pointers. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode
* [svn-r18595] Description:Quincey Koziol2010-04-2050-325/+596
| | | | | | | | Clean up compiler warnings Tested on: Mac OS X/32 10.6.3 (amazon) w/debug (too minor to require h5committest)
* [svn-r18589] Snapshot version 1.9 release 67HDF Tester2010-04-1814-28/+28
|
* [svn-r18581] Changes made to allow building programs on windows machines.Allen Byrne2010-04-152-14/+15
| | | | | Tested: Windows, Local linux
* [svn-r18579] Purpose:Mike McGreevy2010-04-1546-230/+265
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Autotool Upgrade / Libtool Bug Fix Description: Updated autotools referenced in bin/reconfigure as follows: Autoconf 2.64 --> Autoconf 2.65 Automake 1.11 --> Automake 1.11.1 Libtool 2.2.6a --> Libtool 2.2.6b-mcg The referenced libtool version is a custom version of 2.2.6b. It has been tweaked to fix a bug in libtool that occurs when using PGI 10.0 compilers. A check incorrectly categorizes the C++ compiler as version 1.0 instead of 10.0, and the link line is subsequently set up incorrectly and fails to compile. A patch has been made available and will be included in the next release of libtool, but in the meantime I've applied the patch to a custom installation as indicated above. This bin/reconfigure now references the custom installation, and the resulting configure script will correctly categorize the PGI 10.0 C++ compiler. Ran bin/reconfigure to regenerate configure and makefiles. Tested: jam and amani with PGI 10.0 compilers. h5committest
* [svn-r18577] Fix for Bug 1741:Allen Byrne2010-04-151-1/+3
| | | | | | | | H5Rcreate given a region reference with a space_id of -1 throws assert and crashes on Windows machines. Add check for case and return error. Tested: Windows amd local linux
* [svn-r18572] Added new file to projectAllen Byrne2010-04-152-0/+8
|
* [svn-r18571] Description:Quincey Koziol2010-04-1531-1065/+2608
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring r18542 from metadata journaling "merging" branch to trunk: Bring new object header pin/unpin & protect/unprotect routines and split-out object header chunk proxy changes from metadata_journaling branch to "merging" branch, along with some other minor tweaks to clean up compiler warnings, etc. Also: clean up chunk protect/unprotect calls when allocating or freeing space in a chunk, optimize metadata accumulator code to avoid some re-reading of information from the file, refactor H5O_pin/H5O_unpin from way they are done on the merging branch back to way they were previously done on trunk, other minor code cleanups, etc. Tested on FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18567] Purpose: Fix error in call to memmove() in H5B_remove_helper. ↵Neil Fortner2010-04-151-1/+1
| | | | | | | | This error was only reproducible through the use of electric fence. Tested: Fedora (too minor for h5committest)
* [svn-r18565] Description:Quincey Koziol2010-04-153-50/+46
| | | | | | | | Minor whitespace and compiler warning cleanups Tested on: Mac OS X/32 10.6.3 (amazon) w/debug (too minor to require h5committest)
* [svn-r18564] Description:Quincey Koziol2010-04-155-14/+29
| | | | | | | | Clean up compiler warnings. Tested on: Mac OS X/32 10.6.3 (amazon) w/debug (too simple to require h5committest)
* [svn-r18563] I put a header in the output printout. No test is needed.Raymond Lu2010-04-151-0/+6
|
* [svn-r18560] I added header for output print out. No test is needed.Raymond Lu2010-04-151-0/+7
|
* [svn-r18559] I took out the dsets test because it's part of testhdf5 now.Raymond Lu2010-04-151-1/+0
|
* [svn-r18551] Description:Scot Breitenfeld2010-04-132-0/+8
| | | | | | | | | | | | | | | | In order to compile stand-alone Fortran wrappers the following files need to be installed via make install: (1) From the source: trunk/fortran/src/H5f90i.h - defines the character type and includes the file H5f90i_gen.h (2) From the compiled source: trunk/fortran/src/H5f90i_gen.h - a generated file at hdf5 compile time relating the C types to the Fortran types for interoperability. Since these C/Fortran types need to match those used in generating h5cc and h5fc commands we include the files H5f90i_gen.h and H5f90i.h in the hdf5/include install directory when Fortran is enabled. the files are installed with the other fortran files in include and also removed when the installation is cleaned. Test: jam
* [svn-r18549] Updated missed configuration.Allen Byrne2010-04-131-2/+2
|
generated by cgit v0.12 at 2024-11-09 11:39:40 (GMT)