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| * Add zlib and szip pagesAllen Byrne2020-09-041-0/+12
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| * Correct COPYING pathAllen Byrne2020-09-041-1/+1
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* Merge pull request #2871 in HDFFV/hdf5 from ↵Quincey Koziol2020-09-039-232/+32
|\ | | | | | | | | | | | | | | | | | | | | fix_nil_collective_metadata_write_1_12 to hdf5_1_12 * commit '8b48ddb4c8d02aec2bc5e938fe7b789f6ad9c2b2': Add release note for collective metadata fix Fix mis-merge from develop Update buffer count Revert " Checkin of fix for CGNS bug" Revert "Removed commeted out code from H5C_dump_coll_write_list()"
| * Add release note for collective metadata fixQuincey Koziol2020-09-031-0/+6
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| * Fix mis-merge from developQuincey Koziol2020-09-031-6/+1
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| * Update buffer countQuincey Koziol2020-09-031-29/+22
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| * Revert " Checkin of fix for CGNS bug"Quincey Koziol2020-09-038-207/+8
| | | | | | | | This reverts commit 94c34773ceae5b30c4afb227d0385ebf4ab6ce28.
| * Revert "Removed commeted out code from H5C_dump_coll_write_list()"Quincey Koziol2020-09-031-0/+5
| | | | | | | | This reverts commit eb75dc1bb02e13902d73a36caafe763eea585d02.
* | Merge pull request #2872 in HDFFV/hdf5 from vol_dataset_io_dxpl_fix_1_12 to ↵Quincey Koziol2020-09-032-15/+13
|\ \ | |/ |/| | | | | | | | | hdf5_1_12 * commit '9dde542398800763ab6f26e406c304c2b529a375': Bug fix to allow pass-through VOL connectors to set DXPL properties (like requesting collective operations) on dataset I/O
| * Bug fix to allow pass-through VOL connectors to set DXPL properties (like ↵Quincey Koziol2020-09-032-15/+13
|/ | | | requesting collective operations) on dataset I/O
* Merge pull request #2861 in HDFFV/hdf5 from ↵Quincey Koziol2020-08-288-47/+55
|\ | | | | | | | | | | | | hdf5_1_12_remove_unneeded_tagging to hdf5_1_12 * commit '4174fcb8c0a7f8f5ec5297f223c052eca039d5c3': Remove redundant calls to set the metadata cache tag
| * Remove redundant calls to set the metadata cache tagQuincey Koziol2020-08-278-47/+55
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* | Merge pull request #2862 in HDFFV/hdf5 from ↵Dana Robinson2020-08-272-13/+72
|\ \ | |/ |/| | | | | | | | | ~DEROBINS/hdf5_der:1_12_vfd_stubs to hdf5_1_12 * commit '2d6b43feefed8328d595469b9159af954e29c099': Adds HDFS VFD stubs to prevent binary compatibility problems
| * Adds HDFS VFD stubs to prevent binary compatibility problemsDana Robinson2020-08-272-13/+72
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* Merge pull request #2850 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_12 to ↵Allen Byrne2020-08-264-4/+11
|\ | | | | | | | | | | | | | | hdf5_1_12 * commit 'afb06550c5dcac37174c335e6876a6140f269eb5': MinGW uses "MinGW Makefiles" The version string has a second use for packaging
| * MinGW uses "MinGW Makefiles"Allen Byrne2020-08-262-2/+7
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| * The version string has a second use for packagingAllen Byrne2020-08-262-2/+4
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* Merge pull request #2825 in HDFFV/hdf5 from hdf5_1_12_namespace_cleanup to ↵Quincey Koziol2020-08-25359-10155/+6647
|\ | | | | | | | | | | | | | | | | | | | | hdf5_1_12 * commit '1077a767ff3885dd23bdbfdfba51037c925ce23c': Minor fixes to align w/state of 1.12 code Correct typos w/HGOTO_DONE & HGOTO_ERROR Move H5T_vlen_reclaim to package scope Switch H5VM inline routines back to single underscope and put a comment in their header about this naming Clean up private / package / static namespace issues (function naming, which header file, FUNC_ENTER / LEAVE, etc). Removed remaining personal email addresses from library source code (still needs cleaned from other directories). Misc. warning, style, and whitespace cleanup.
| * Minor fixes to align w/state of 1.12 codeQuincey Koziol2020-08-222-11/+10
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| * Correct typos w/HGOTO_DONE & HGOTO_ERRORQuincey Koziol2020-08-227-50/+47
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| * Move H5T_vlen_reclaim to package scopeQuincey Koziol2020-08-224-6/+6
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| * Switch H5VM inline routines back to single underscope and put a comment in ↵Quincey Koziol2020-08-2240-166/+214
| | | | | | | | their header about this naming
| * Clean up private / package / static namespace issues (function naming, whichQuincey Koziol2020-08-22362-10269/+6717
| | | | | | | | | | | | header file, FUNC_ENTER / LEAVE, etc). Removed remaining personal email addresses from library source code (still needs cleaned from other directories). Misc. warning, style, and whitespace cleanup.
* | Merge pull request #2838 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_12 to ↵Allen Byrne2020-08-251-0/+20
|\ \ | | | | | | | | | | | | | | | | | | hdf5_1_12 * commit 'd2f58a6468be9d5e10d10d439ae905f7825e74e7': Add back function for VERIFY_EXTERNAL_CONSOLIDATION
| * | Add back function for VERIFY_EXTERNAL_CONSOLIDATIONAllen Byrne2020-08-251-0/+20
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* | Merge pull request #2827 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_12 to ↵Allen Byrne2020-08-242-1/+5
|\ \ | |/ |/| | | | | | | | | | | | | | | | | hdf5_1_12 * commit 'e31653cf5f547d4d8baff7be40f3b1b69b1765c5': Revert H5_VERS_SUBRELEASE check Add special case when H5_VERS_SUBRELEASE is 0 Condition if (H5_VERS_SUBRELEASE) is incorrectly false when H5_VERS_SUBRELEASE is 0, a valid value for H5_VERS_SUBRELEASE. Updated to if (${H5_VERS_SUBRELEASE} STREQUAL "") with corresponding reversal of action statements to avoid NOT. Add hypen to subrelease regex Add ifdef blocks to S3/HDFS test
| * Revert H5_VERS_SUBRELEASE checkAllen Byrne2020-08-241-5/+1
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| * Add special case when H5_VERS_SUBRELEASE is 0Allen Byrne2020-08-241-3/+7
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| * Condition if (H5_VERS_SUBRELEASE) is incorrectly false whenLarry Knox2020-08-241-3/+3
| | | | | | | | | | | | H5_VERS_SUBRELEASE is 0, a valid value for H5_VERS_SUBRELEASE. Updated to if (${H5_VERS_SUBRELEASE} STREQUAL "") with corresponding reversal of action statements to avoid NOT.
| * Add hypen to subrelease regexAllen Byrne2020-08-231-1/+1
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| * Add ifdef blocks to S3/HDFS testAllen Byrne2020-08-231-0/+4
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* Merge pull request #2822 in HDFFV/hdf5 from hdf5_1_12_coll_chunk_fill_fix to ↵Quincey Koziol2020-08-222-54/+66
|\ | | | | | | | | | | | | | | | | | | | | hdf5_1_12 * commit '3e4f255c5031f14a68d387df0762f7a2210df5a3': Added release note for MPI type fix Simplify default use of MPI_BYTE Don't free builtin MPI_BYTE MPI type Simplify code to avoid using a boolean to free MPI types Avoid creating MPI datatypes on ranks with 0 chunks to write'
| * Added release note for MPI type fixQuincey Koziol2020-08-211-0/+6
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| * Simplify default use of MPI_BYTEQuincey Koziol2020-08-211-8/+3
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| * Don't free builtin MPI_BYTE MPI typeQuincey Koziol2020-08-211-2/+2
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| * Simplify code to avoid using a boolean to free MPI typesQuincey Koziol2020-08-211-7/+3
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| * Avoid creating MPI datatypes on ranks with 0 chunks to write'Quincey Koziol2020-08-211-53/+68
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* Merge pull request #2817 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_12 to ↵Larry Knox2020-08-201-34/+20
|\ | | | | | | | | | | | | hdf5_1_12 * commit '3cea63d8e52635c43a3b86602f71e5cd37d7149c': Revert "Merge pull request #2815 in HDFFV/hdf5 from hdf5_1_12_small_chunk_io_opt to hdf5_1_12"
| * Revert "Merge pull request #2815 in HDFFV/hdf5 from ↵Larry Knox2020-08-201-34/+20
|/ | | | | | | hdf5_1_12_small_chunk_io_opt to hdf5_1_12" This reverts commit 331cf8c38a3ab7c8862b5645efcbe197fe3c107e, reversing changes made to ed0985ff7fa2e64a903ea7d9c9343524d9d64ea8.
* Merge pull request #2815 in HDFFV/hdf5 from hdf5_1_12_small_chunk_io_opt to ↵Quincey Koziol2020-08-201-20/+34
|\ | | | | | | | | | | | | hdf5_1_12 * commit 'c32d274e83661dc202ead5efe7458028ea5ef3fb': Only initialize the contiguous or compact I/O info struct when needed.
| * Only initialize the contiguous or compact I/O info struct when needed.Quincey Koziol2020-08-191-20/+34
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* Merge pull request #2805 in HDFFV/hdf5 from ↵Dana Robinson2020-08-1931-539/+602
|\ | | | | | | | | | | | | ~DEROBINS/hdf5_der:tools_normalization_1_12 to hdf5_1_12 * commit '9c255bc995a9cc2b7b328507a759cc059427c839': Normalization of tools with develop
| * Normalization of tools with developDana Robinson2020-08-1831-539/+602
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* Merge pull request #2791 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_12 to ↵Larry Knox2020-08-171-1/+0
|\ | | | | | | | | | | | | hdf5_1_12 * commit 'd9c03258ac076b1798b0ed856e68cceb198f0366': Fix MANIFEST.
| * Fix MANIFEST.Larry Knox2020-08-171-1/+0
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* Merge pull request #2787 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_12 to ↵Larry Knox2020-08-172-10/+10
|\ | | | | | | | | | | | | hdf5_1_12 * commit '62e054435fb49a0a735fa429ffe10134b43db849': 1. HDFFV-10830 part 2, move AC_CHECK_HEADERS([szlib.h] after AC_CHECK_LIB([sz], [SZ_BufftoBuffCompress] to avoid compiling H5Z.c with szlib.h after its path is removed from AM_CPPFLAGS. 2. Remove unnecessary links to ${HDF5_TOOLS_LIB_TARGET} in utils/mirror_vfd/CMakeLists.txt that prevent building HDF5 with tools disabled.
| * 1. HDFFV-10830 part 2, move AC_CHECK_HEADERS([szlib.h] afterLarry Knox2020-08-172-10/+10
|/ | | | | | | | AC_CHECK_LIB([sz], [SZ_BufftoBuffCompress] to avoid compiling H5Z.c with szlib.h after its path is removed from AM_CPPFLAGS. 2. Remove unnecessary links to ${HDF5_TOOLS_LIB_TARGET} in utils/mirror_vfd/CMakeLists.txt that prevent building HDF5 with tools disabled.
* Merge pull request #2774 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_12 to ↵Allen Byrne2020-08-1638-146/+2115
|\ | | | | | | | | | | | | | | | | hdf5_1_12 * commit 'e0d59f92bbd5014a9f141da18937fd5b2fc1d8c0': Tag TRILABS-227 changes and fix MANIFEST HDFFV-9984 Add test files HDFFV-9989 Merge h5repack merge/prune from develop
| * Tag TRILABS-227 changes and fix MANIFESTAllen Byrne2020-08-152-4/+13
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| * HDFFV-9984 Add test filesAllen Byrne2020-08-1526-0/+1554
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