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* [svn-r29738] Description:Quincey Koziol2016-04-1913-33/+909
| | | | | | | | Bring "single" chunk index from revise_chunks branch to trunk. Tested on: MacOSX/64 10.11.4 (amazon) w/serial, parallel & production (w/check-vfd) (h5committest forthcoming)
* [svn-r29736] Description:Quincey Koziol2016-04-191-0/+5
| | | | | | | | Close FAPL that was leaked in zero_dims test. Tested on: MacOSX/64 10.11.4 (amazon) w/serial, parallel & production, including check-vfd (h5committest forthcoming)
* [svn-r29730] Description:Quincey Koziol2016-04-181-0/+2
| | | | | | | Add missing pre-generated files to list of test files to copy. Tested on: Windows (Reported by Allen)
* [svn-r29722] Description:Quincey Koziol2016-04-178-141/+1985
| | | | | | | | Bring over more dataset tests from the revise_chunks branch. Tested on: MacOSX/64 10.11.4 (amazon) w/serial, parallel & production (h5committest forthcoming)
* [svn-r29718] Description:Quincey Koziol2016-04-161-3/+938
| | | | | | | | Bring changes from revise_chunks branch to trunk Tested on: MacOSX/64 10.11.4 (amazon) w/serial, parallel, and production (h5committest forthcoming)
* [svn-r29717] Description:Quincey Koziol2016-04-164-6/+416
| | | | | | | | | | Correct chunk index computation for earrays and farrays, particularly when copying datasets with H5Ocopy() and other operations (like H5Dget_storage_size) that require iterating over all chunks. Tested on: MacOSX/64 10.11.4 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r29716] Description:Quincey Koziol2016-04-161-2/+4
| | | | | | | | Add missing testfiles from dsets.c to the 'clean' target. Tested on: MacOSX/64 10.11.4 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r29715] Description:Quincey Koziol2016-04-161-11/+15
| | | | | | | | | Clean up coding to increment/decrement underlying FAPL for multi/split VFDs, to avoid copying property lists as much. Tested on: MacOSX/64 10.11.4 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r29714] Description:Quincey Koziol2016-04-161-5/+1
| | | | | | | | | Switch to use internal DXPL ID, to align with recent changes within the library. Tested on: MacOSX/64 10.11.4 (amazon) w/serial & parallel (Too minor to require h5committest)
* [svn-r29712] Description:Quincey Koziol2016-04-162-2/+2
| | | | | | | | Minor code cleanups to address typos & warnings. Tested on: MaOSX/64 10.11.4 (amazon) w/serial & parallel (Too minor to require h5committest)
* [svn-r29710] Purpose: Code improvementsBinh-Minh Ribler2016-04-152-84/+84
| | | | | | | | | | | Description: - Replaced "goto out" and "out:" with "goto error" and "error:" to indicate the failure situations. - Replaced old-style casts with static_cast to remove warnings. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* [svn-r29698] Switched true and false to TRUE and FALSE in a function inDana Robinson2016-04-141-2/+2
| | | | | | | test/external.c. Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1 autotools serial (external test only)
* [svn-r29696] Applied fix for HDFFV-9439 to mpicc config as well as mpif90 in ↵Larry Knox2016-04-141-1/+1
| | | | | | config/linux-gnulibc1. Tested with h5committest.new on kituo, ostrich, osx1010dev and platypus.
* [svn-r29683] HDFFV-1956: h5diff will warn if a dataset is virtual instead of ↵Allen Byrne2016-04-112-20/+0
| | | | | | | failing. h5diff does not consider the layout type when comparing datasets. SKIP h5repack VDS tests until h5repack is fixed. remove h5repack fix ddl files needed when h5repack VDS fix is implemented.
* [svn-r29681] HDFFV-1956: h5diff will warn if a dataset is virtual instead of ↵Allen Byrne2016-04-111-4/+6
| | | | | | | failing. h5diff does not consider the layout type when comparing datasets. SKIP h5repack VDS tests until h5repack is fixed. Additional tests to be skipped
* [svn-r29680] HDFFV-1956: h5diff will warn if a dataset is virtual instead of ↵Allen Byrne2016-04-115-44/+203
| | | | | | failing. h5diff does not consider the layout type when comparing datasets. SKIP h5repack VDS tests until h5repack is fixed.
* [svn-r29678] Revert r29672 changes to h5diff.Larry Knox2016-04-093-35/+10
| | | | Tested h5committest.new
* [svn-r29673] Fix typo of var nameAllen Byrne2016-04-081-1/+1
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* [svn-r29672] HDFFV-1956: h5diff will warn if a dataset is virtual instead of ↵Allen Byrne2016-04-083-10/+35
| | | | failing. h5diff does not consider the layout type when comparing datasets.
* [svn-r29668] Added H5Dfarray.c to CMake.Dana Robinson2016-04-081-0/+1
| | | | | Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1 CMake serial
* [svn-r29665] Added new chunk index types to h5debug.Dana Robinson2016-04-071-2/+50
| | | | | Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1 Autotools serial
* [svn-r29659] Added fixed array chunk indexing from revise_chunks.Dana Robinson2016-04-0714-22/+2189
| | | | | Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1 Autotools serial w/ Java, Fortran, & C++
* [svn-r29655] Added H5D_CHUNK_BTREE to the deprecated section of H5Dpublic.h.Dana Robinson2016-04-071-0/+1
| | | | Tested on: 64-bit Ubuntu 15.10 (build only, not used in existing code)
* [svn-r29653] fixed A variable that is specified as an argument to the ↵Scot Breitenfeld2016-04-071-1/+1
| | | | intrinsic procedure C_LOC must either have type and type parameters that are interoperable with a C type, or be a nonpolymorphic, scalar variable with no length type parameters.
* [svn-r29649] changed indentation format, updated commentsScot Breitenfeld2016-04-061-17/+12
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* [svn-r29648] FIX: HDFFV-8486 Scot Breitenfeld2016-04-066-122/+621
| | | | | | | | h5tbmake_table_f is missing the fill_data parameter (which is in the C counterpart) ADDED NEW API: h5tbread_table_f Tested: platypus, ostrich
* [svn-r29646] FIX: HDFFV-9522 Scot Breitenfeld2016-04-061-5/+71
| | | | | | Add support for variable length datatypes in the High Level H5LT Fortran APIs Tested: platypus (gnu)
* [svn-r29644] Description:Quincey Koziol2016-04-061-1/+1
| | | | | | | | Finish correcting initializer for chunked layouts. Tested on: MacOSX/64 10.11.4 (amazon) w/serial, parallel & production (to minor to require h5committest)
* [svn-r29640] Description:Quincey Koziol2016-04-051-1/+1
| | | | | | | | Add missing inializer from revise_chunks branch. Tested on: MacOSX/64 10.11.4 (amazon) w/serial (Too minor to require h5committest)
* [svn-r29638] Added new chunk index types to trace code.Dana Robinson2016-04-051-0/+34
| | | | | Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1 autotools serial
* [svn-r29635] Description:Quincey Koziol2016-04-0519-21/+3773
| | | | | | | | | Bring support for earray and v2 B-trees from revise_chunks branch to trunk. Tested on: MacOSX/64 10.11.4 (amazon) w/serial, parallel & production (h5committest forthcoming)
* [svn-r29632] Description:Quincey Koziol2016-04-051-6/+10
| | | | | | | | Align w/revise_chunks branch Tested on: MacOSX/64 10.11.4 (amazon) w/parallel (h5committest forthcoming)
* [svn-r29630] Description:Quincey Koziol2016-04-051-25/+31
| | | | | | | | Minor style cleanups, from revise_chunks branch Tested on: MacOSX/64 10.11.4 (amazon) w/serial, parallel and production (too minor to require h5committest)
* [svn-r29626] Description:Quincey Koziol2016-04-043-17/+23
| | | | | | | | Revise method of invoking object flush callback. Tested on: MacOSX/64 10.11.4 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r29625] Description:Quincey Koziol2016-04-042-115/+0
| | | | | | | | Removed unused routines Tested on: MacOSX/64 10.11.4 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r29620] Merge of r29619 from revise_chunks. Minor H5Fpublic.h comment ↵Dana Robinson2016-04-041-3/+0
| | | | | | update. Tested on: 64-bit Ubuntu 15.10 (build only, no code changes)
* [svn-r29614] Description:Quincey Koziol2016-04-034-38/+71
| | | | | | | | | Bring updated code for setting chunk size information from revise_chunks branch. Tested on: MacOSX/64 10.11.4 (amazon) w/serial, parallel & production (h5committest forthcoming)
* [svn-r29612] Description:Quincey Koziol2016-04-0318-150/+115
| | | | | | | | | Bring updated layout and EFL property comparisons and new "latest format" flags from revise_chunks branch. Tested on: MacOSX/64 10.11.4 (amazon) w/serial, parallel & production (h5committest forthcoming)
* [svn-r29607] Description:Quincey Koziol2016-04-0214-261/+1452
| | | | | | | | | Bring "don't filter partial edge chunks" capability from revise_chunks to trunk. Tested on: MacOSX/64 10.11.4 (amazon) w/debug, production & parallel (h5committest forthcoming)
* [svn-r29603] HDFFV-9746 Add test for "/" for H5LTpath_validScot Breitenfeld2016-04-011-0/+23
| | | | Tested: jam (gnu)
* [svn-r29601] Cleanup case of CMake commands in tools.Allen Byrne2016-03-3113-25/+41
| | | | | Update CTestCustom file for new tests. Add connection from HDF5_ENABLE_USING_MEMCHECKER cmake option to library define USING_MEMCHECKER.
* [svn-r29599] added comments to sourceScot Breitenfeld2016-03-301-12/+16
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* [svn-r29591] Changed buf variable in h5awrite_f from INOUT to INScot Breitenfeld2016-03-291-1/+1
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* [svn-r29560] Remove list and check of flags, defer to library function for ↵Allen Byrne2016-03-242-12/+7
| | | | checking, which will return an error. That error then produces a HDF5FunctionArgument exception instead of IllegalArgument exception.
* [svn-r29557] Add comments to CMake macros and do append error fileAllen Byrne2016-03-243-28/+50
| | | | revise_chunks rev 29556
* [svn-r29554] Description:Binh-Minh Ribler2016-03-241-1/+0
| | | | Removed an extra line in the Copyright block. No need to test.
* [svn-r29552] Normalization with revise_chunks in preparation for big merge.Dana Robinson2016-03-241-2/+5
| | | | | Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1 autotools serial
* [svn-r29549] Minor normalization w/ revise_chunks in preparation for big merge.Dana Robinson2016-03-243-8/+8
| | | | | | Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1 autotools serial autotools parallel (MPICH 3.1.4)
* [svn-r29548] Minor normalization w/ trunk in preparation for big merge.Dana Robinson2016-03-2430-471/+182
| | | | | | Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1 autotools serial autotools parallel (MPICH 3.1.4)
* [svn-r29545] Minor normalization w/ trunk in preparation for big merge.Dana Robinson2016-03-246-680/+582
| | | | | | Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1 autotools serial autotools parallel (MPICH 3.1.4)
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