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stackable_vol
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~SONGYULU/hdf5_ray:bugfix/HDFFV-10571-cve-2018-17237-divided-by-zero to develop
* commit 'c923cdad6e515c842f3795a5b6d754ad94021e09':
HDFFV-10571: Minor format changes.
HDFFV-10571: Minor change - reformatting the error check.
HDFFV-10571: Minor change - adding the error check right after decoding of chunk dimension for safeguard.
HDFFV-10571: Minor change - revised the comment to be clearer.
HDFFV-10571 Divided by Zero vulnerability. Minor fix: I added an error check to make sure the chunk size is not zero.
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chunk dimension for safeguard.
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check to make sure the chunk size is not zero.
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metadata read attempts.
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stackable_vol
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~SONGYULU/hdf5_ray:bugfix/HDFFV-10601-issues-with-chunk-cache-hash2 to develop
* commit '4f5a52e595194562644517b7600f3b96d4008c17':
HDFFV-10601: Adding the new hdf5/tools/test/perform/chunk_cache.c to MANIFEST.
HDFFV-10601: Some compiler doesn't support clock_gettime(). So I changed to use gettimeofday (HDgettimeofday in the HDF5 library).
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use gettimeofday (HDgettimeofday in the HDF5 library).
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~SONGYULU/hdf5_ray:bugfix/HDFFV-10601-issues-with-chunk-cache-hash to develop
* commit 'cd13d24e5140578a880aebe4e2d8b899179d0870':
HDFFV-10601: I added error checking to the HDF5 functions.
HDFFV10601: Adding performance test to verify the improvement.
HDFFV-10601: I changed to a better way to calculate the number of chunks in a dataset.
HDFFV-10601 Issues with chunk cache hash value calcuation:
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a dataset.
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https://bitbucket.hdfgroup.org/scm/~songyulu/hdf5_ray into bugfix/HDFFV-10601-issues-with-chunk-cache-hash
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1. H5D__chunk_hash_val: When the number of chunks in the fastest changing dimension is larger than the number of slots in the hash table, H5D__chunk_hash_val abandons the normal hash value calculation algorithm and simply uses the scaled dimension. This will cause chunks a selection that cuts across chunks in dimensions other than the fastest changing to all have the same hash value, and they will therefore always evict each other from the cache, having an obvious major performance impact. Eliminated the check for the number of slots in this function and always use the full algorithm.
2. H5D__chunk_init: When the scaled dimensions (number of chunks in each dimension) are calculated in H5D__chunk_init, a simple divide ("/") operator is used with the dataset size in elements and the chunk size in elements. While this is fine when the dataset size is an exact multiple of the chunk size, in other cases, since "/" rounds down, it results in a scaled dimension one less than it should (it ignores the partial edge chunk). This has trickle down effects on hash value calculation that can cause excess hash value collisions and therefore performance issues. Changed the calculation to (((dataset_size - 1) / chunk_size) + 1).
Tested the build with Autotool and CMake.
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* commit '9bbaca66ca1f987ede2f5c7e9c5938523a47262f':
fixed sp.
HDFFV-10511 -- Make fortran specific subroutines names PRIVATE
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Made non-public APIs private.
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to develop
* commit '3edd97731e90b7fc3a378e2c6e9c043a23327d93':
Renamed h5repart's -family_to_sec2 to -family_to_single.
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~DEROBINS/hdf5_der:java_test_error_stack to develop
* commit '110c1b671ea7f2f5e8154d66f6ca6fcfb00b2bb2':
The Java tests will no longer fail when the zlib is not present.
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H5Fget_access_plist(). Also, other misc. cleanups, etc.
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stackable_vol
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~DEROBINS/hdf5_der:java_test_error_stack to develop
* commit 'ef29549f0d66612fcdeefc763785c6826c67ad8b':
Updated the Java tests so that they don't fail when the error stack changes.
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error stack changes.
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* commit '7e204759f861f4f482db2032127a4dc406fcd1d6':
Fix generate file commands
Fix target depends
Fix target files for commands
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* commit '6a2e97bead3c4d366f28b6a1e4e338fc07014954':
HDFFV-10537: Remove installation of Fortran test mod files
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* commit 'cd73b837db95493de0641b2c63537b42b8b57a84':
HDFFV-10537: Remove installation of Fortran test mod files
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Removed from autools install, cmake does not have this issue.
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* commit '1d2f7ca4901d126d677a32ecb4e2bc60b3b41182':
TRILAB-36 only copy shared generated
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stackable_vol
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* commit '4616c1e863ab756d22af696672ba9bc2fe0eea25':
Add custom target to force wait on generated file
TRILAB-81 fix typo
TRILAB-82 fixed errors found in review
Update windows test machine info
TRILAB-81 Output error if filename length is greater then 255
TRILAB-81 check for func success before using value
TRILAB-81 Coverity fix
Move options to root CMakeLists.txt
TRILAB-34 fix required through testing
TRILAB-34 add batch option (also patch2 from 10633)
TRILAB-81 coverity fixes
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* commit '1652a60fcbe9894d7c34a778fb24dce1979fb9a9':
HDFFV-10605 Only test plugins if SHARED enabled
Correct platforms
Correct extlib depends
Commit version changes for additional files for 1.11.3 snapshot release.
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* commit '81cb24ac1db0f4936b19067cdb7fa4e14e0d00db':
Commit version changes for additional files for 1.11.3 snapshot release.
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develop
* commit '79903575e64e1e8f46ce27e6212d5d5939a8a900':
HDFFV-10605 Only test plugins if SHARED enabled
Correct platforms
Correct extlib depends
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