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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-04-069-40/+34
|\ | | | | | | | | * commit 'a09f810e8d372d1e85661c52a7ef735a164904ad': Narrowed the scope of ISO_C_BINDING with ONLY additions
| * Merge pull request #2494 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:FortranWarn to ↵Scot Breitenfeld2020-04-069-40/+34
| |\ | | | | | | | | | | | | | | | | | | develop * commit '83d29f04c28e150fde5776fba64fbe4fa04f0f25': Narrowed the scope of ISO_C_BINDING with ONLY additions
| | * Narrowed the scope of ISO_C_BINDING with ONLY additionsScot Breitenfeld2020-04-069-40/+34
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* | | Minor updates and fix settings for fortran flagsAllen Byrne2020-04-064-6/+3
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* | | Update intel flagsAllen Byrne2020-04-063-2/+4
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* | | Fix missing endifAllen Byrne2020-04-061-0/+1
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* | | Correct improper file moveAllen Byrne2020-04-061-0/+0
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* | | Move intel warnings to subfolder, update autotools filesAllen Byrne2020-04-069-100/+118
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* | | Corrected noteAllen Byrne2020-04-061-3/+3
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* | | Remove overzealous additionsAllen Byrne2020-04-052-3/+1
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* | | Correct whitespace in flags, force list modeAllen Byrne2020-04-054-15/+15
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* | | Flag construction must be after compiler detectionAllen Byrne2020-04-0512-386/+507
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* | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-04-052-2/+2
|\ \ \ | |/ / | | | | | | | | | | | | * commit '5d1590079ea0061a7b86d7210cb796b6d58a17c7': Skip testing of passthrough VOL connector in a Family File tools test Restore previous tools library driver name behavior with passthrough VOL connector
| * | Merge pull request #2490 in HDFFV/hdf5 from tools_vol_update to developJordan Henderson2020-04-032-2/+2
| |\ \ | | | | | | | | | | | | | | | | | | | | * commit 'a5a2fb44296327787476407a249d9470b3c80427': Skip testing of passthrough VOL connector in a Family File tools test Restore previous tools library driver name behavior with passthrough VOL connector
| | * | Skip testing of passthrough VOL connector in a Family File tools testJordan Henderson2020-04-031-1/+1
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| | * | Restore previous tools library driver name behavior with passthrough VOL ↵Jordan Henderson2020-04-031-1/+1
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* | | | TRILAB-192 add c++ and fortran warnings build systems one fileAllen Byrne2020-04-0539-925/+581
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* | | | Update release note for CMake warningsAllen Byrne2020-04-031-0/+2
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* | | | Add missing header includeAllen Byrne2020-04-031-0/+1
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* | | Merge pull request #2474 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2020-04-039-7/+130
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | * commit '36b8060323f24341c8f4610108e8ccb955dbe192': Correct extra flags TRILAB-192 remove comment TRILAB-192 add comparable clang flags
| * \ \ Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-04-023-18/+18
| |\ \ \ | |/ / / |/| | | | | | | | | | | * commit 'ac099b0b6391fd149af4f4fcf8f79189dcc615bb': Fixed unnecessary H5R casts in the tools that were raising warnings.
* | | | Merge pull request #2485 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-04-023-18/+18
|\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop * commit '1c854737665f3f853a324c34292390ab57431fec': Fixed unnecessary H5R casts in the tools that were raising warnings.
| * | | | Fixed unnecessary H5R casts in the tools that were raising warnings.Dana Robinson2020-04-023-18/+18
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| * | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-04-023-389/+480
| |\ \ \ | |/ / / |/| | | | | | | | | | | | | | | | | | | | | | | * commit 'bae05235a2d87acb0d6b3a2e1c32f3b6f48cf203': Changed default dataset shared struct to initialize hid_t IDs to H5I_INVALID_HID. A fix in the cleaning up code for datatype when datatype initialization via H5D__init_type() fails. This is triggered by the tests for revised references when the libver bounds setting does not allow version 4 datatype message to be created. The test failure is abort core dumped. This is due to the datatype initialization fails before the datatype ID is registered. The datatype cleanup code should provide for the above situation. The code to fix the problem is the same as what is done in H5D__open_oid(). Remove tongue-in-cheek credit for Rusty Shackleford and Dale Alvin Gribble. Follow HDF5 conventions.
* | | | Merge pull request #2461 in HDFFV/hdf5 from ↵Vailin Choi2020-04-022-350/+400
|\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~VCHOI/my_third_fork:bugfix/dtype_close_on_error to develop * commit 'afdcac28b85d690eebc80ab568fa5266081baaaa': A fix in the cleaning up code for datatype when datatype initialization via H5D__init_type() fails. This is triggered by the tests for revised references when the libver bounds setting does not allow version 4 datatype message to be created. The test failure is abort core dumped. This is due to the datatype initialization fails before the datatype ID is registered. The datatype cleanup code should provide for the above situation. The code to fix the problem is the same as what is done in H5D__open_oid().
| * | | | A fix in the cleaning up code for datatype when datatype initialization via ↵vchoi2020-03-232-350/+400
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | H5D__init_type() fails. This is triggered by the tests for revised references when the libver bounds setting does not allow version 4 datatype message to be created. The test failure is abort core dumped. This is due to the datatype initialization fails before the datatype ID is registered. The datatype cleanup code should provide for the above situation. The code to fix the problem is the same as what is done in H5D__open_oid().
* | | | | Merge pull request #2484 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-04-021-0/+3
|\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop * commit 'a267c4e5d37f00bf6cff942b57b5a13affaa8bd5': Changed default dataset shared struct to initialize hid_t IDs to H5I_INVALID_HID.
| * | | | | Changed default dataset shared struct to initialize hid_t IDs toDana Robinson2020-04-021-0/+3
|/ / / / / | | | | | | | | | | | | | | | H5I_INVALID_HID.
* | | | | Merge pull request #2363 in HDFFV/hdf5 from ~DYOUNG/werror:thread_id to developDavid Young2020-04-011-39/+77
|\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '63c95faf49559ea66e3066427961095b69fdb213': Remove tongue-in-cheek credit for Rusty Shackleford and Dale Alvin Gribble. Follow HDF5 conventions.
| * | | | | Remove tongue-in-cheek credit for Rusty Shackleford and Dale Alvin Gribble.David Young2020-02-101-21/+0
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Delete the comment questioning whether pthread_mutex_lock is allowed in a key destructor, since pthread_key_create(3) provides the answer: There is no notion of a destructor-safe function. If an application does not call pthread_exit() from a signal handler, or if it blocks any signal whose handler may call pthread_exit() while calling async-unsafe functions, all functions may be safely called from destructors. Delete redundant comment.
| * | | | | Follow HDF5 conventions.David Young2020-02-071-30/+89
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| | | * | | Correct extra flagsAllen Byrne2020-04-011-2/+2
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| | | * | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-04-017-105/+107
| | | |\ \ \ | |_|_|/ / / |/| | | | | | | | | | | | | | | | | * commit '2c494482eb986ce051463e96d12a661c494a9335': Minor renaming in the tools code.
* | | | | | Merge pull request #2483 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-04-017-105/+107
|\ \ \ \ \ \ | |_|_|_|_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop * commit 'b1533616f28996983ec505fff8f62edf3dd820b3': Minor renaming in the tools code.
| * | | | | Minor renaming in the tools code.Dana Robinson2020-03-317-105/+107
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| | | * | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-03-301-0/+2
| | | |\ \ | |_|_|/ / |/| | | | | | | | | | | | | | * commit 'a46f31c2eb436e946639bb32518ce279507fa368': Fix for HDFFV-11065.
* | | | | Merge pull request #2479 in HDFFV/hdf5 from ~GHEBER/hdf5:bugfix/HDFFV-11065 ↵Gerd Heber2020-03-301-0/+2
|\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop * commit '2dfc047bc4aca7c13bccf44da97bff026cbbf5a6': Fix for HDFFV-11065.
| * | | | | Fix for HDFFV-11065.Gerd Heber2020-03-291-0/+2
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| | | | * | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-03-303-46/+53
| | | | |\ \ | |_|_|_|/ / |/| | | | | | | | | | | | | | | | | * commit 'c20e268979ec623fb159501e382c6cc55a5d665e': Fix latent bug in h5repack options file reading Add 'enable-error-stack' option to h5format_convert
* | | | | | Merge pull request #2478 in HDFFV/hdf5 from tools_vol_update to developJordan Henderson2020-03-293-46/+53
|\ \ \ \ \ \ | |/ / / / / |/| | | | / | | |_|_|/ | |/| | | * commit '9676029742f18aaae37dd48947bc1faf23406169': Fix latent bug in h5repack options file reading Add 'enable-error-stack' option to h5format_convert
| * | | | Fix latent bug in h5repack options file readingJordan Henderson2020-03-293-46/+53
| | | | | | | | | | | | | | | | | | | | Add 'enable-error-stack' option to h5format_convert
| * | | | Merge pull request #2476 in HDFFV/hdf5 from ↵Dana Robinson2020-03-2882-570/+1242
| |\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:tools_vol_update to tools_vol_update * commit 'f5cb547825e462c3299b6f41d03a71aa6faef950': (29 commits) Minor renaming in h5dump (addr --> token) Correct macro check Add extensive warnings to tools executables Reorg comments Correct warning flag form Because of tools macro, this needs to be a warning unused set-variable in macro Fix Werror issues in JNI and tools TRILAB-192 fix JNI shadow warning TRILAB-192 restrict extensive warnings to libraries TRILAB-24 use CHECK_STRUCT_HAS_MEMBER TRILAB-192 add release note TRILAB-192 Identify warnings that fail as errors Correct failure when allocation tracking are disabled. Update the MANIFEST for the autoconf/cmake shared warnings files. Correct syntax Update CMake compiler flags to use same set of warnings Revise API for H5get_alloc_stats() to take a struct instead of separate values. Allow use of INTEL icl/icl++ for clang Move the GNU warnings configuration under config/gnu-warnings/ and trim the filename prefixes. Update config/gnu-flags to suit. ...
| | | | | * TRILAB-192 remove commentAllen Byrne2020-03-291-1/+0
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| | | | | * Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-03-291-55/+33
| | | | | |\ | |_|_|_|_|/ |/| | | | | | | | | | | | | | | | | * commit 'e9e3e2f1d67ccf71cc5af711065d1f85761ab5b7': Refactor to reduce verbosity.
* | | | | | Merge pull request #2471 in HDFFV/hdf5 from alloc_stat_tests to developQuincey Koziol2020-03-281-55/+33
|\ \ \ \ \ \ | |_|/ / / / |/| | | | | | | | | | | | | | | | | * commit '0eb562bc201a38f9b4a82e954bfc63daa6838d45': Refactor to reduce verbosity.
| * | | | | Refactor to reduce verbosity.Quincey Koziol2020-03-261-55/+33
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| | | | | * Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-03-282-30/+30
| | | | | |\ | |_|_|_|_|/ |/| | | | | | | | | | | | | | | | | * commit 'f5cb547825e462c3299b6f41d03a71aa6faef950': Minor renaming in h5dump (addr --> token)
* | | | | | Merge pull request #2475 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-03-282-30/+30
|\ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop * commit '2dd6075c7a13ba7cbaa922448df4bd5e72c1b5ab': Minor renaming in h5dump (addr --> token)
| * | | | | | Minor renaming in h5dump (addr --> token)Dana Robinson2020-03-282-30/+30
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| | | | | * TRILAB-192 add comparable clang flagsAllen Byrne2020-03-278-5/+129
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