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* [svn-r26276] Merged r26075-80, 86 from features/autotools_rework branch.Dana Robinson2015-02-238-587/+83
| | | | | | | | | | | | Cleans up time functions in the autotools input files. Removed deprecated gettimeofday() time zone code and configure processing. Also removed some unused time function configure checks and defines. Fixes: HDFFV-9083 and HDFFV-9085 Tested on: 32-bit linux, serial and parallel (jam) OS X (kite) Solaris (emu)
* [svn-r26275] Merge of r26042, 26083, 26084, 26085 from features/autotools_reworkDana Robinson2015-02-223-105/+94
| | | | | | | | | | | | | | | | - Updated configure.ac so that the direct VFD can now be built without specifying _GNU_SOURCE, etc. on the command line. - The direct VFD is now disabled by default. It was previously enabled, but the configuration script couldn't configure it properly, making it a moot point. Fixes: HDFFV-9057, HDFFV-7567, HDFFV-9088, HDFFV-7566 Tested on: h5committest jam w/ direct VFD (*very* slow!) NOTE: platypus cmake fails, but this is not a new error.
* [svn-r26272] Merge of r26071 from features/autotools_reworkDana Robinson2015-02-225-75/+6
| | | | | | | | | | | | Removes the --with-default-vfd option from configure. This was basically useless and only allowed selecting the stdio VFD. Since this is a demo VFD and not really a production VFD, we decided to retire this option. Fixes: HDFFV-9081 Tested on: h5committest NOTE: platypus cmake fails, but this is not a new error.
* [svn-r26271] Reverse merge of r26260 which was causing daily test failures.Dana Robinson2015-02-2212-364/+45
| | | | Tested on: jam w/ parallel and fortran
* [svn-r26260] - add an attribute callback to call H5_term_library when ↵Mohamad Chaarawi2015-02-2012-45/+364
| | | | | | | | | MPI_COMM_SELF is destroyed. - add tests for above. - this is a fix for HDFFV-883. tested h5committest
* [svn-r26259] Remove fileAllen Byrne2015-02-201-321/+0
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* [svn-r26256] Remove file - obsoleted by cmake 3.1 minimumAllen Byrne2015-02-201-1/+1
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* [svn-r26255] Remove file - obsoleted by cmake 3.1 minimumAllen Byrne2015-02-201-1/+0
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* [svn-r26254] Changed mpi test to use include 'mpif.h'Scot Breitenfeld2015-02-201-1/+1
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* [svn-r26253] Update CMake with fortran source properties and defines, ↵Allen Byrne2015-02-2010-172/+178
| | | | correct name of hl fortran examples option check
* [svn-r26249] Removed warnings about NO TRACE from bin/trace script.Dana Robinson2015-02-201-6/+5
| | | | | | Fixes: HDFFV-9098 Tested on: jam (bin/trace only - causes no source changes)
* [svn-r26247] Reverted back from using 'USE MPI' to include 'mpif.h' since ↵Scot Breitenfeld2015-02-204-4/+5
| | | | windows does not seem to support 'USE MPI'.
* [svn-r26246] Corrects a regular expression in the bin/trace Perl script that ↵Dana Robinson2015-02-208-3/+14
| | | | | | | | | | did not match API calls which return a pointer. Fixes: HDFFV-9141 Tested on: h5committest
* [svn-r26241] Fixed issue with default 8 byte integers using xlf compilers.Scot Breitenfeld2015-02-194-26/+31
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* [svn-r26236] Updated the MANIFEST file after deleting VMS support files.Dana Robinson2015-02-191-49/+0
| | | | Tested on: bin/chkmanifest
* [svn-r26234] Removed VMS support from the library. A tag ↵Dana Robinson2015-02-1943-4818/+0
| | | | (vms_last_support_trunk) was created just before the VMS files were deleted.
* [svn-r26233] Disable h5tenum_insert_f if F2003 is enabled.Scot Breitenfeld2015-02-191-1/+1
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* [svn-r26230] Add def file comment when it is F2003vms_last_support_trunkAllen Byrne2015-02-191-0/+2
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* [svn-r26225] Removes broken open() call work-around that was specific to the nowDana Robinson2015-02-196-30/+0
| | | | | | | | | | unsupported Code Warrior compiler. Also removes the H5_NO_SHARED_WRITING symbol from the pubconf file. Fixes: HDFFV-9080 Tested on: jam only, after bin/reconfigure (all platforms should see no source changes)
* [svn-r26223] add another H5close before finalize so with-mpe does not fail.Mohamad Chaarawi2015-02-181-1/+4
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* [svn-r26222] call H5close before MPI_Finalize() and close some objects that ↵Mohamad Chaarawi2015-02-181-1/+8
| | | | could be potentially left open.
* [svn-r26219] Merge r26029 from autotools_rework feature branch.Dana Robinson2015-02-182-0/+10
| | | | | | | | | Adds a comment to configure.ac indicating that Cygwin still has problems with srcdir and time. Fixes: HDFFV-9082 Tested on: jam (comment only change) w/ bin/reconfigure
* [svn-r26217] Added H5T_PROVISIONAL_mp_H5TENUM_INSERT_FScot Breitenfeld2015-02-181-1/+1
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* [svn-r26216] Removed inappropriate TEXT() macro from the plugin name and ↵Dana Robinson2015-02-181-9/+21
| | | | | | | | changed a few Win32 API calls to use the <function>A version, which forces char behavior (vs. wchar_t) when UNICODE is defined. This only affects Windows. Fixes HDFFV-8927 Tested on 64-bit Windows 7 with Visual Studio 2012 and CMake 3.2 with UNICODE/_UNICODE both defined and undefined.
* [svn-r26214] Fix for HDFFV-8908:Scot Breitenfeld2015-02-187-52/+210
| | | | h5tenum_insert_f does not work with default 8 byte integers (xlf compiler)
* [svn-r26213] Description:Quincey Koziol2015-02-183-88/+76
| | | | | | | | Minor code cleanups, to align with revise_chunks branch. Tested on: Mac OSX/64 10.10.2 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial
* [svn-r26211] revert ci 26204Scot Breitenfeld2015-02-187-218/+57
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* [svn-r26210] Removed debugging statement and typos.Scot Breitenfeld2015-02-182-5/+2
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* [svn-r26208] Update cmake minimumsAllen Byrne2015-02-1843-44/+44
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* [svn-r26206] Reverting change r26204Scot Breitenfeld2015-02-181-4/+0
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* [svn-r26205] Fix for HDFFV-8908:Scot Breitenfeld2015-02-188-57/+225
| | | | | h5tenum_insert_f does not work with default 8 byte integers (xlf compiler)
* [svn-r26203] increase string size to 128 for MPE function event name.Mohamad Chaarawi2015-02-181-1/+1
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* [svn-r26200] Fixed mixed tabs and spaces before making changes.Dana Robinson2015-02-171-56/+55
| | | | No code changes.
* [svn-r26195] Description:Quincey Koziol2015-02-176-13/+14
| | | | | | | | | Switch from enum H5D_CHUNK_BTREE to H5D_CHUNK_IDX_BTREE, along with a couple of minor whitespace touchups. Tested on: Mac OSX/64 10.10.2 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial
* [svn-r26193] Description:Quincey Koziol2015-02-171-112/+35
| | | | | | | | | | Fix locking error when splitting root node of v1 B-tree, and simplify the iteration over entries in a v1 B-tree (avoiding using the sibling pointer also). Tested on: Mac OSX/64 10.10.2 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial
* [svn-r26191] Description:Quincey Koziol2015-02-176-125/+359
| | | | | | | | | Track the min & max keys for a v2 B-tree, so it can more efficiently determine if a key is present in the B-tree. Tested on: Mac OSX/64 10.10.2 (amazon) w/parallel & serial Linux/32 2.6.x (jam) w/serial
* [svn-r26188] Merged autotools fixes into the trunk:Scot Breitenfeld2015-02-1649-691/+724
| | | | HDFFV-9089, HDFFV-9091, HDFFV-9092, HDFFV-9094, HDFFV-9095
* [svn-r26180] merge configure fixes for HDFFV-9068,9069,9096,9097,9135 from ↵Mohamad Chaarawi2015-02-1646-1198/+102
| | | | | | | | | | | | autotools_rework branch: - Remove Infering parallel compilers (C and Fortran) from configure.ac - Remove restriction to build shared with parallel - Cleanup parallel sections in configure.ac - remove large file support checks - MPE fixes. tested with h5committest.
* [svn-r26177] Snapshot version 1.9 release 214HDF Tester2015-02-1513-26/+26
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* [svn-r26173] HDF5-9117: if testing for proper working 'tr' command is needed.Albert Cheng2015-02-142-14/+2
| | | | | | | | | | Long time ago, the tr command in some platform does not work properly and this test was added to detect broken tr and abort the configure process. We are not aware of such broken tr command in current systems and decided to retire this test. The setup of ${TR} is still needed as it is used to process DEBUG_PKG. Tested: h5committested plus using "./configure --enable-debug=all" in jam.
* [svn-r26172] Fix for: HDFFV-8685 -- Have one include file to use for HL ↵Scot Breitenfeld2015-02-137-7/+1
| | | | | | libraries added hdf5.h to hdf5_hl.h
* [svn-r26170] Fix for HDFFV-8559Scot Breitenfeld2015-02-134-1/+146
| | | | Correction of mistyped variable and removed implicit typing for interfaces.
* [svn-r26162] Update versionsAllen Byrne2015-02-121-11/+11
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* [svn-r26161] Fix cmake case. Allen Byrne2015-02-1211-25/+27
| | | | | Turn on F2003 by default. Set source properties in fortran cmake files.
* [svn-r26149] Fix potential memory error reported by valgrind inNeil Fortner2015-02-091-23/+21
| | | | | | | | H5D__link_chunk_collective_io. This would occur when performing collective I/O on a dataset with only 1 chunk, and a participating process had nothing to read or write. Tested: jam, koala, ostrich (h5committest)
* [svn-r26146] Snapshot version 1.9 release 213HDF Tester2015-02-0813-26/+26
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* [svn-r26124] Fixed issue with deprecated symbols for H5G constantsScot Breitenfeld2015-02-042-27/+23
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* [svn-r26122] Fix for HDFFV-9040 h5rget_object_type_f returns different types ↵Scot Breitenfeld2015-02-033-43/+52
| | | | | | | | than indicated by API Slight change of global variable definitions from C. Tested: jam.
* [svn-r26112] Add quotes around nameAllen Byrne2015-02-021-1/+1
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* [svn-r26109] Correct name of source fileAllen Byrne2015-02-021-1/+1
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