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* [svn-r6546] Purpose:Bill Wendling2003-03-3173-398/+1005
| | | | | | | | | | | | Update Description: Updated copyright statement in files which hadn't been updated yet. Platforms tested: Linux (Only comment change) Misc. update:
* [svn-r6545] Purpose:Bill Wendling2003-03-316-19/+75
| | | | | | | | | | | | Update Description: Updated copyright Platforms tested: LInux (Comment change only) Misc. update:
* [svn-r6544] Purpose:Bill Wendling2003-03-316-20/+84
| | | | | | | | | | | | Update Description: Update copyright statement Platforms tested: Linux (Comment change only) Misc. update:
* [svn-r6543] Purpose:Bill Wendling2003-03-313-9/+36
| | | | | | | | | | | | Update Description: Updated copyright statement Platforms tested: Linux (only comment change) Misc. update:
* [svn-r6542] Purpose:Bill Wendling2003-03-311-3/+11
| | | | | | | | | | | | Update Description: Updated copyright statement Platforms tested: None needed Misc. update:
* [svn-r6541] Purpose:Bill Wendling2003-03-313-9/+37
| | | | | | | | | | | | Update Description: Updated Copyright statements Platforms tested: None needed... Misc. update:
* [svn-r6540] Purpose:Bill Wendling2003-03-3120-72/+262
| | | | | | | | | | | | Update Description: Updated copyright statement Platforms tested: Linux (Only change in comments...checked if compiles) Misc. update:
* [svn-r6539] Purpose:Bill Wendling2003-03-316-2/+81
| | | | | | | | | | | | Update Description: Updated (and in some cases added) the copyright statement. Platforms tested: Linux (Comment changes...only tested if they compile) Misc. update:
* [svn-r6538] Purpose:Bill Wendling2003-03-3161-321/+836
| | | | | | | | | | | | | Update Description: Updated the Copyright statement Platforms tested: Linux (This change is only in the comments, so I just check that the modules still compile) Misc. update:
* [svn-r6537] Purpose:Bill Wendling2003-03-312-7/+24
| | | | | | | | | | | | Update Description: Updated Copyright statement. Platforms tested: None needed Misc. update:
* [svn-r6536] Purpose:Bill Wendling2003-03-315-11/+57
| | | | | | | | | | | | Updated Copyright Statement Description: Replaced old copyright statement with new one. Platforms tested: No need. Misc. update:
* [svn-r6535] Purpose:Albert Cheng2003-03-311-3/+3
| | | | Updated with new zlib used.
* [svn-r6534] Purpose:Albert Cheng2003-03-311-0/+2
| | | | Updated with AIX configure bug fix.
* [svn-r6532] Purpose:Albert Cheng2003-03-311-1/+2
| | | | | | | | | | | | | | | | | | | | Bug fix Description: test/dtypes failed badly when -O is used. Trying to recompile test/* code without -O did not eliminate the errors. So, the failure is deep in the hdf5 library. Solution: For now, removed '-O' from $PROD_CFLAGS so that enable-production will use no optimization. Need to find out what exactly trigger the errors. Platforms tested: Did not do h5committest because this is an AIX configure change only. Tested it in Copper. Need to test it on other offsite machines. Misc. update: Updated release_docs/RELEASE.
* [svn-r6529] Purpose:Albert Cheng2003-03-291-2/+2
| | | | | | | | | | | | | | Improvement Description: Added a 5 seconds timeout to the PING command so that it can detect host not online quicker. Platforms tested: The three platforms tests do not cover this command. Test it in eirene where it is usually run. Misc. update:
* [svn-r6527] Purpose:Bill Wendling2003-03-277-107/+58
| | | | | | | | | | | | | | | | | | | | | | | Bug Fix & Update Description: FPHDF5 was creating files which didn't have the EOA field in the superblock set correctly. It turns out that the SAP was keeping this information to itself instead of giving it to the client processes. Naughty SAP! Solution: Have the SAP send this information back to the clients so that they can update the superblock as necessary. This now creates a file (with just the root group) that looks correct! Only problem is that there's extra file space being allocated. Also, at program termination, there's an infinite loop... Platforms tested: H5committests (run by hand on burrwhite, arabica, and modi4) Misc. update:
* [svn-r6526] Purpose:Pedro Vicente Nunes2003-03-271-186/+185
| | | | | | | | | | | | | | update Description: clean code , removed empty spaces, tested on solaris Solution: Platforms tested: w2000, linux, solaris Misc. update:
* [svn-r6525] Purpose:Albert Cheng2003-03-271-0/+2
| | | | | | | | | | | | | | | | New test feature Description: Added the VFD_LIST definition to support the "make check-vfd" tests. Platforms tested: h5committested. Since check-vfd is not invoked by default, I went to each machine to invoke them by hand. The target worked fine but there were errors reported from those driver tests. (Those errors were beyond the scope of this make target test.) Misc. update:
* [svn-r6524] Purpose:Albert Cheng2003-03-271-0/+11
| | | | | | | | | | | | | | | | | | | | | | New test feature Description: The various virtual file drivers (multi, family, core, ...) are not tested automatically. One would have to do it by hand by setenv HDF5_DRIVER <driver> and then do gmake check in test/. Solution: Added a new target, check-vfd, which will take the list from $VFD_LIST and run 'make check' with each of its members. Platforms tested: h5committested. Since check-vfd is not invoked by default, I went to each machine to invoke them by hand. The target worked fine but there were errors reported from those driver tests. (Those errors were beyond the scope of this make target test.) Misc. update:
* [svn-r6523] Purpose:Albert Cheng2003-03-261-3/+6
| | | | | | | | | | | | | | | Bug fix. Description: n_test must be inited to 1 when it is for tests within one machine. Undid my previous mistake. Platforms tested: Eirene. Did not do the h5committest because this is a script and if it works in one machine, it most like will work in all Unix platform. Misc. update:
* [svn-r6522] Purpose:Albert Cheng2003-03-261-9/+23
| | | | | | | | | | | | | | | | | | | | | | | new feature and some bug fixes Description: Add a new feature to "skip" some tests. Sometimes, a machine has problem (e.g. titan and sleipnir having AFS problems). Sometimes some feature in a machine is temporary off (e.g., PGI compilers in eirene.) The tests will be reported being SKIPPED which will be reminder to remove the skipping once the problem is fixed. I installed the skipping control in snaptest.cfg rather than in allhostsfile to have a finer control to skip just a subset of the tests of a machine, rather than skipping the all tests of a machine. Bug fixes: fixed the miscounting of number of tests ran. It was reporting one too many. Platforms tested: Only tested in eirene since eirene is the one uses it directly. Misc. update:
* [svn-r6521] Purpose:Pedro Vicente Nunes2003-03-261-296/+766
| | | | | | | | | | | | | | | | update Description: added the new cosequential match algorythm added extra checking of bad input values Platforms tested: w2000, linux Misc. update:
* [svn-r6520] Frank Baker2003-03-241-56/+555
| | | | | | | | | | | | | | | | | | | | | | | Purpose: Adding descriptions of new library features to the RM Description: H5Pset_fapl_log: Added new 'buf_size' parameter. New 'flags' parameter replaced 'verbosity' parameter, requiring new table describing 20 available flags. H5Pset_filter: Added valid 'filter' parameter values. Modified for Fletcher32 EDC filter. H5Pget_filter: Added return value descriptions. H5Pset_layout & H5Pget_layout: Modified for compact datasets. Added the following new functions: H5Pset_fletcher32 H5Pset_edc_check & H5Pget_edc_check H5Pset_filter_callback H5Pset_shuffle Platforms tested: Safari IE 6
* [svn-r6519] Purpose:Quincey Koziol2003-03-226-72/+105
| | | | | | | | | | | | | Bug fix/code cleanup/new feature Description: Fix h5debug to work correctly again, with all the changes over the past few months. Improved and cleaned up debugging output available in h5debug. Platforms tested: FreeBSD 4.7 (sleipnir)
* [svn-r6517] Elena Pourmal2003-03-211-0/+1
| | | | | | | | | | | | | | | Purpose: Bug fix. Description: When I added support for filters, I forgot to add fortan man pages file to the MANIFEST file. When I run chkmanifest, I discovered that there was also a typo ( ./dac/Makefile.in instead of ./doc/Makefile.in ) Solution: added ./doc/html/fortran/h5z_FORTRAN.html and chnages "a" to "o" Platforms tested: arabica with bin/chkmanifest Misc. update:
* [svn-r6516] Purpose:Albert Cheng2003-03-201-1/+1
| | | | | | | | | | | | | | | | | | | | | Bug fix Description: The $RUNPARALLEL is set even when parallel mode is not used. Then it is used to launch some parallel natured test (e.g. example/ph5example) which is not compiled to be so. That created some unnecessary problem in some situation (e.g., Copper cannot "poe a.out" from an AFS space because of the missing AFS token system bug. Solution: Setup RUNPARALLEL only when parallel mode is enabled. Platforms tested: Only tested in Copper since the change applies to IBM machines only. (note that v1.4 will fail by default due to a problem when the default production mode is used. But that is an error not related to this config file) Misc. update:
* [svn-r6514] Purpose:Bill Wendling2003-03-207-147/+146
| | | | | | | | | | | | | | | | | | | | | | | | | Bug fix and Update Description: From Quincey's comments on the code I checked in last night: - In H5F_close call, the "private" processes should call the H5F_flush with the "CLEAR_ONLY" flag. - There's no need for a special case for FPHDF5 in the FD_real_alloc function since FPHDF5 doesn't define an alloc function. - The return type of H5Pset_fapl_fphdf5 should be herr_t instead of hid_t. I don't know how it got that way in the first place. - The variable names for MPI types and the structure typedefs should be switched: H5FP_request/H5FP_request_t to H5FP_request_t/H5FP_request and so on. - In the H5FP.c module, I was commiting the H5FP_request MPI datatype but using the wrong offset field... Platforms tested: Linux...will test on others, but these are mostly FPHDF5 changes. Misc. update:
* [svn-r6513] Purpose:Binh-Minh Ribler2003-03-201-1/+3
| | | | Added info about support of the C++ API on HP-UX 11.00.
* [svn-r6511] Purpose:Binh-Minh Ribler2003-03-201-0/+1
| | | | Added config file c++/config/hpux11.00
* [svn-r6510] Purpose:Binh-Minh Ribler2003-03-207-21/+0
| | | | | | | | | | | | | | | | | Cleanup Description: Removed "using namespace std" since it's in namespace H5 already. Platforms tested: HPUX 11.00 (kelgia) Linux 2.2x (eirene) IRIX 6.5.11 (modi4) SunOS 5.7 (arabica) - by Elena Misc. update:
* [svn-r6509] Purpose:Binh-Minh Ribler2003-03-208-13/+42
| | | | | | | | | | | | | | | | | | | | | Adding new platform support Description: Added support for the C++ API on hpux11.00 with the compiler aCC. Because aCC doesn't use "std," a new macro H5_NO_STD is provided and used where "std" is presented in the library. In addition, changed several cout's when reporting errors to cerr's. Platforms tested: HPUX 11.00 (kelgia) Linux 2.2x (eirene) IRIX 6.5.11 (modi4) SunOS 5.7 (arabica) - by Elena Misc. update:
* [svn-r6508] Purpose:Binh-Minh Ribler2003-03-201-0/+24
| | | | | | | | | | | | | | | | | | Adding new platform support Description: Added the config file to support the C++ API on hpux11.00 with the compiler aCC. Platforms tested: HPUX 11.00 (kelgia) Linux 2.2x (eirene) IRIX 6.5.11 (modi4) SunOS 5.7 (arabica) - by Elena Misc. update: Will update MANIFEST and release_docs/RELEASE for new features.
* [svn-r6507] Purpose:Bill Wendling2003-03-192-0/+9
| | | | | | | | | | | | | | | bug Fix Description: MPI stuff was getting into the non-parallel headers. Solution: #ifdefed the headers out if H5_HAVE_FPHDF5 isn't defined... Platforms tested: Sol, Modi4 Misc. update:
* [svn-r6506] Purpose:Bill Wendling2003-03-191-7/+43
| | | | | | | | | | | | | Update Description: When doing an allocation, check to see, if it's an FPHDF5 driver, if only the captain should be performing the allocation Platforms tested: Linux, Modi4, Sol Misc. update:
* [svn-r6505] Purpose:Bill Wendling2003-03-193-67/+179
| | | | | | | | | | | | | | | | | Update Description: Have the FPHDF5 module initialized on startup. Have only the captain process perform certain functions (like flushing during an F_close call or allocating the superblock). H5Fistore needed a few checks to see if it was working with an FPHDF5 driver. Done similarly to how MPI and MPIPOSIX drivers are checked.. Platforms tested: Linux, Modi4, Sol Misc. update:
* [svn-r6504] Purpose:Bill Wendling2003-03-193-176/+201
| | | | | | | | | | | | | | | | | | | | | | | | | Why not? Description: Lots of changes. This is basically a "commit because there are a lot of changes" commit. The server now acts more like a metadata caching server. The dumping mechanism finally works (I think). At least in the test I did it seemed to write things back. There's a new MPI TAG to use (H5FP_TAG_DUMP) when dumping things. Changed a lot of the functions from passing a structure around to just passing a pointer to that structure. I have no clue why I did it the previous way... Um...And more synchronization stuff between the client and server. The protocol between the two was being broke in a couple of places. We're getting closer! Platforms tested: Linux (probably Modi4 too) Misc. update:
* [svn-r6503] Purpose:Bill Wendling2003-03-191-24/+41
| | | | | | | | | | | | | | | | | | | | | Bug Fix Description: The MPI datatypes we were committing weren't using the correct structure. Also, we needed to know the rank of the captain process inside of the BARRIER COMM. Solution: Changed to use the correct structure. Got the Captain process's rank and Bcast it to the "privates". Platforms tested: Linux Misc. update:
* [svn-r6502] Purpose:Bill Wendling2003-03-192-58/+154
| | | | | | | | | | | | | | | | | | | Update Description: More changes to the FPHDF5 file driver. Too many to mention here. Some highlights: - Addition of lock/unlock methods to the driver, though they aren't implemented fully just yet. - Extra query functions to determine various things about the file. (If this is the captain process, etc) - Fixes to make things work... Platforms tested: Linux Misc. update:
* [svn-r6501] Purpose:Bill Wendling2003-03-1911-63/+172
| | | | | | | | | | | | | | New Feature Description: Added support for the lock and unlock function calls for file drivers. Only FPHDF5 uses this feature. All of these drivers don't define lock or unlock methods. Platforms tested: Linux, Modi4, Sol Misc. update:
* [svn-r6500] Purpose:Bill Wendling2003-03-191-57/+87
| | | | | | | | | | | | New Feature Description: Added function pointers for the lock and unlock functions. Platforms tested: Linux, Modi4, Sol Misc. update:
* [svn-r6499] Purpose:Bill Wendling2003-03-191-17/+18
| | | | | | | | | | | | | Update Description: Added support for FPHDF5 wherever there was support for MPI/IO and/or MPIPOSIX. Platforms tested: Linux, Modi4, Sol Misc. update:
* [svn-r6498] Purpose:Bill Wendling2003-03-191-8/+0
| | | | | | | | | | | | | | Cleanup Description: The H5O_FPHDF5 object was left in this header file by mistake when the H5Ofphdf5 module was removed Solution: Removed it. Platforms tested: Linux
* [svn-r6497] Purpose:Quincey Koziol2003-03-1912-56/+73
| | | | | | | | | | | | | | | | | | | Finish code cleanup Description: Wrap up the conversion of H5F_flush's multiple boolean flags into a single bitfield of flags by pushing the flags down into the H5AC_flush and H5F_istore_flush routines. Also, changed the flags from H5_FLUSH_<foo> to H5F_FLUSH_<foo> to be more consistent with rest of library. And reverted the changes to H5FDflush and H5FD_flush routines. Platforms tested: FreeBSD 4.7 (sleipnir) Solaris 5.8 (sol) IRIX64 6.5 (modi4) w/parallel Misc. update:
* [svn-r6496] Purpose:Bill Wendling2003-03-194-85/+159
| | | | | | | | | | | | | | | | | | | | | | Refactoring of Flush Logic Description: The Flushing logic passed in multiple flags to indicate what type of flush it was: closing, invalidate, alloc only. This made extending the function of the flush logic to handle other flags annoying. Solution: I changed it to be just one bitmasked flag to indicate what type of flushing to do. I also added the CLEAR_ONLY flag, which will be used in the FPHDF5 stuff. Platforms tested: h5committest doesn't work for me (my environment isn't setup on the other machines I guess). I tested it manually: Linux parallel & C++ Sol Fortran Modi4 parallel & Fortran.
* [svn-r6495] Elena Pourmal2003-03-195-2/+135
| | | | | | | | | | | | | | | | | | | | | Purpose: Catching up with the C library Description: Added tests for the follwoing new fortran functions h5iget_name_f h5tis_variavle_str_f h5zunregister_f h5zfilter_avail_f h5pset_shuffle_f h5pset_fletcher32 h5pset_edc_check_f h5pget_edc_check_f h5dfill_f Solution: Platforms tested: arabica(C and F90), burrwhite (pgcc and pgf90), modi4 (F90 and parallel) Misc. update:
* [svn-r6494] Elena Pourmal2003-03-1918-58/+1252
| | | | | | | | | | | | | | | | | | | | | Purpose: Catching up with the C library Description: Added the follwoing new fortran functions h5iget_name_f h5tis_variavle_str_f h5zunregister_f h5zfilter_avail_f h5pset_shuffle_f h5pset_fletcher32 h5pset_edc_check_f h5pget_edc_check_f h5dfill_f Solution: Platforms tested: arabica(C and F90), burrwhite (pgcc and pgf90), modi4 (F90 and parallel) Misc. update:
* [svn-r6493] Elena Pourmal2003-03-191-0/+4
| | | | | | | | | | | | Purpose: Catching up with the C library Description: Added file to provide PGI Fortran support Solution: Platforms tested: arabica(C and F90), burrwhite (pgcc and pgf90), modi4 (F90 and parallel) Misc. update:
* [svn-r6492] Elena Pourmal2003-03-192-30/+326
| | | | | | | | | | | | Purpose: Catching up with the C library Description: Enabled checking for shuffle, deflate and checksum filters for Fortran Solution: Platforms tested: arabica(C and F90), burrwhite (pgcc and pgf90), modi4 (F90 and parallel) Misc. update:
* [svn-r6491] Elena Pourmal2003-03-196-13/+289
| | | | | | | | | | | | | | | | | | | | Purpose: Catching up with the C library Description: Updated documentation files to include information on the following functions h5iget_name_f h5tis_variavle_str_f h5zunregister_f h5zfilter_avail_f h5pset_shuffle_f h5pset_fletcher32 h5pset_edc_check_f h5pget_edc_check_f h5dfill_f Solution: Platforms tested: arabica(C and F90), burrwhite (pgcc and pgf90), modi4 (F90 and parallel) Misc. update:
* [svn-r6490] Elena Pourmal2003-03-191-0/+4
| | | | | | | | | | | | | Purpose: Catching up with C library Description: Fortran Library would not configure correctly with PGI compilers because configure couldn't find any appropriate filesin the config directories. Solution: Added new files for PGI compilers support on Linux 2.4 Platforms tested: arabica(C and F90), burrwhite (pgcc and pgf90), modi4 (F90 and parallel) Misc. update:
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