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| | | * | | | | | | Merge pull request #29 in ~VCHOI/my_third_fork from develop to ↵Vailin Choi2020-04-06124-1583/+3362
| | | |\ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | bugfix/dtype_close_on_error * commit 'f6514c35ea3786206a8db73e1cad8fce8fe6a715': (48 commits) Updated test ddl files so CMake passes after h5dump failures. Narrowed the scope of ISO_C_BINDING with ONLY additions Skip testing of passthrough VOL connector in a Family File tools test Restore previous tools library driver name behavior with passthrough VOL connector Updated tools dump output when dataset offset is undefined. Fixed unnecessary H5R casts in the tools that were raising warnings. Added checks for native optional call support in some of the tools. Changed default dataset shared struct to initialize hid_t IDs to H5I_INVALID_HID. Correct extra flags Modifications based on PR review feedback. Minor renaming in the tools code. Misc changes for h5dump VOL changes. Fix for HDFFV-11065. Fix latent bug in h5repack options file reading Add 'enable-error-stack' option to h5format_convert TRILAB-192 remove comment Minor renaming in h5dump (addr --> token) TRILAB-192 add comparable clang flags Fix some missing symbols issues in tools library A few small tweaks to the tools from review Replace usage of some standard library functions with HD- versions ...
| | * | \ \ \ \ \ \ \ Merge pull request #2501 in HDFFV/hdf5 from ↵Larry Knox2020-04-083-5/+6
| | |\ \ \ \ \ \ \ \ \ | | | | |_|/ / / / / / | | | |/| | / / / / / | | | |_|_|/ / / / / | | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~LRKNOX/hdf5_lrk:Wflags_changes_develop_merge to develop * commit 'e6cd19937b0e5fe5b49f7e88b08f15305e0b5af1': Squashed commit of the following: Add \d to list of characters allowed after '-' in versions.
| | | * | | | | | | Squashed commit of the following:Larry Knox2020-04-082-4/+5
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | commit 8963c3bf756f8f8ec21beea9bd29a767e77675a8 Author: Larry Knox <lrknox@hdfgroup.org> Date: Wed Apr 8 16:52:27 2020 -0500 Commit changes to gnu-cxxflags to remove unmatched " and to gnu-fflags to not add C warnings flags to H5_FCFLAGS.
| | | * | | | | | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Larry Knox2020-04-08115-3004/+4138
| | | |\ \ \ \ \ \ \ | | | |/ / / / / / / | | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'b27a20f8c0e286ea7c2836605632ea2ee5522d03': (59 commits) Hide Frortran directive warnings Updated test ddl files so CMake passes after h5dump failures. Remove flag from gfort-general in gfort-5, add /EHsc to Win C++ Update printf pointer syntax and revert fortran to f2003 Reduce window fortran standard to f90 Minor updates and fix settings for fortran flags Update intel flags Narrowed the scope of ISO_C_BINDING with ONLY additions Fix missing endif Correct improper file move Move intel warnings to subfolder, update autotools files Corrected note Remove overzealous additions Correct whitespace in flags, force list mode Flag construction must be after compiler detection TRILAB-192 add c++ and fortran warnings build systems one file Skip testing of passthrough VOL connector in a Family File tools test Update release note for CMake warnings Restore previous tools library driver name behavior with passthrough VOL connector Add missing header include ...
| | | * | | | | | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Larry Knox2020-03-2460-306/+855
| | | |\ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'd3ef866a2963ce93d0b95184534a70849b6fa11d': Revise API for H5get_alloc_stats() to take a struct instead of separate values. Move the GNU warnings configuration under config/gnu-warnings/ and trim the filename prefixes. Update config/gnu-flags to suit. Fixed the RELEASE.txt note for HDFFV-11057 Fix shutdown errors when using the HDF5_VOL_CONNECTOR environment variable to set a dynamically loaded plugin as the default VOL connector. Fixes HDFFV-11057 Fix threadsafe for new test Fix issues when deserializing point/all/none selection with version beyond the library's supported version: (1) Verify the decoded version before proceeding further with deserialization (2) Close the dataspace if errors occurred after opening the dataspace Very minor comment change in H5VLconnector.h. Add routines to query the library's free list sizes and allocation stats. By default, demote warnings promoted to errors back to warnings. Incorporate the H5_ECFLAGS into the library CFLAGS. Now a bunch of errors will occur. Next commit will demote the warnings promoted to errors back to warnings again. Break out warnings into more files that autoconf and CMake can share. This change temporarily disables the warnings that were promoted to errors, but I will add those warnings back as warnings, not errors, in the next commit. Avoid a crash, don't check if we're flushing when the file is closing: there's no need to check if the metadata cache is flushing if we already know the file is closing, because the condition we rely on is "closing OR flushing." Further, the cache may have already gone away, so sometimes calling into the cache to see if it's flushing will crash the program.
| | | * | | | | | | | Add \d to list of characters allowed after '-' in versions.Larry Knox2020-03-121-1/+1
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| | | | | | | * | | | Fix memory leak in t_span_tree.c testJordan Henderson2020-04-091-0/+6
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| | * | | | | | | | Merge pull request #2489 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2020-04-0748-1362/+1154
| | |\ \ \ \ \ \ \ \ | | | |_|_|_|/ / / / | | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'f362e14add76bc137c8f9bb8542a697e48900b91': Hide Frortran directive warnings Remove flag from gfort-general in gfort-5, add /EHsc to Win C++ Update printf pointer syntax and revert fortran to f2003 Reduce window fortran standard to f90 Minor updates and fix settings for fortran flags Update intel flags Fix missing endif Correct improper file move Move intel warnings to subfolder, update autotools files Corrected note Remove overzealous additions Correct whitespace in flags, force list mode Flag construction must be after compiler detection TRILAB-192 add c++ and fortran warnings build systems one file Update release note for CMake warnings Add missing header include
| | | * | | | | | | Hide Frortran directive warningsAllen Byrne2020-04-071-7/+2
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| | | * | | | | | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-04-073-10/+563
| | | |\ \ \ \ \ \ \ | | | |/ / / / / / / | | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'f6514c35ea3786206a8db73e1cad8fce8fe6a715': Updated test ddl files so CMake passes after h5dump failures. Modifications based on PR review feedback. Add two routines gen_ref_files() and gen_sel_files() to generate test files related to references and selections. These test files will be copied to 1.12, 1.10 and 1.8 for compatibility testing.
| | * | | | | | | | Merge pull request #2495 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-04-062-10/+10
| | |\ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop * commit '8e948aa7b717cd7a8dcb12877a4ad61df2a46ebd': Updated test ddl files so CMake passes after h5dump failures.
| | | * | | | | | | | Updated test ddl files so CMake passes after h5dump failures.Dana Robinson2020-04-062-10/+10
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| | * | | | | | | | | Merge pull request #2472 in HDFFV/hdf5 from ↵Vailin Choi2020-04-061-0/+553
| | |\ \ \ \ \ \ \ \ \ | | | |/ / / / / / / / | | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~VCHOI/my_third_fork:bugfix/bounds_compat to develop * commit '3f081c99376ad562dcb6bbf7d6c11216f682aca7': Modifications based on PR review feedback. Add two routines gen_ref_files() and gen_sel_files() to generate test files related to references and selections. These test files will be copied to 1.12, 1.10 and 1.8 for compatibility testing.
| | | * | | | | | | | Modifications based on PR review feedback.vchoi2020-04-011-71/+51
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| | | * | | | | | | | Add two routines gen_ref_files() and gen_sel_files() to generate test files ↵vchoi2020-03-261-0/+573
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | related to references and selections. These test files will be copied to 1.12, 1.10 and 1.8 for compatibility testing.
| | | * | | | | | | | Merge pull request #28 in ~VCHOI/my_third_fork from develop to ↵Vailin Choi2020-03-261-1/+1
| | | |\ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | bugfix/bounds_compat * commit '181c6110251d7a9e9cc23e14dfd8f52cdb14422b': Correct macro check
| | | | | * | | | | | | Remove flag from gfort-general in gfort-5, add /EHsc to Win C++Allen Byrne2020-04-062-1/+2
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| | | | | * | | | | | | Update printf pointer syntax and revert fortran to f2003Allen Byrne2020-04-062-107/+107
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| | | | | * | | | | | | Reduce window fortran standard to f90Allen Byrne2020-04-061-1/+1
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| | | | | * | | | | | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-04-069-82/+138
| | | | | |\ \ \ \ \ \ \ | | | |_|_|/ / / / / / / | | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '4830a1796441abbb5a4fbd2cff9a651f2a0d066e': Updated tools dump output when dataset offset is undefined. Added checks for native optional call support in some of the tools. Misc changes for h5dump VOL changes.
| | * | | | | | | | | | Merge pull request #2486 in HDFFV/hdf5 from ↵Dana Robinson2020-04-069-82/+138
| | |\ \ \ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:tools_vol_update to develop * commit '110cafb9c7b5b9f9170340432062295d630f3ee6': Updated tools dump output when dataset offset is undefined. Added checks for native optional call support in some of the tools. Misc changes for h5dump VOL changes.
| | | * \ \ \ \ \ \ \ \ \ Merge branch 'develop' into tools_vol_updateDana Robinson2020-04-0622-67/+184
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| | | * | | | | | | | | | Updated tools dump output when dataset offset is undefined.Dana Robinson2020-04-022-2/+2
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| | | * | | | | | | | | | Added checks for native optional call support in some of the tools.Dana Robinson2020-04-024-49/+95
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| | | * | | | | | | | | | Merge branch 'develop' into tools_vol_updateDana Robinson2020-04-0210-494/+587
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| | | * \ \ \ \ \ \ \ \ \ \ Merge branch 'develop' into tools_vol_updateDana Robinson2020-03-312-55/+35
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| | | * \ \ \ \ \ \ \ \ \ \ \ Merge branch 'tools_vol_update' of ↵Dana Robinson2020-03-303-46/+53
| | | |\ \ \ \ \ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | https://bitbucket.hdfgroup.org/scm/~derobins/hdf5_der into tools_vol_update
| | | * | | | | | | | | | | | | Misc changes for h5dump VOL changes.Dana Robinson2020-03-307-44/+54
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| | | | | | | | | * | | | | | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-04-069-40/+34
| | | | | | | | | |\ \ \ \ \ \ \ | | | |_|_|_|_|_|_|/ / / / / / / | | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'a09f810e8d372d1e85661c52a7ef735a164904ad': Narrowed the scope of ISO_C_BINDING with ONLY additions
| | * | | | | | | | | | | | | | Merge pull request #2494 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:FortranWarn to ↵Scot Breitenfeld2020-04-069-40/+34
| | |\ \ \ \ \ \ \ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | develop * commit '83d29f04c28e150fde5776fba64fbe4fa04f0f25': Narrowed the scope of ISO_C_BINDING with ONLY additions
| | | * | | | | | | | | | | | | | Narrowed the scope of ISO_C_BINDING with ONLY additionsScot Breitenfeld2020-04-069-40/+34
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| | | | | | | | | * | | | | | | Minor updates and fix settings for fortran flagsAllen Byrne2020-04-064-6/+3
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| | | | | | | | | * | | | | | | Update intel flagsAllen Byrne2020-04-063-2/+4
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| | | | | | | | | * | | | | | | Fix missing endifAllen Byrne2020-04-061-0/+1
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| | | | | | | | | * | | | | | | Correct improper file moveAllen Byrne2020-04-061-0/+0
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| | | | | | | | | * | | | | | | Move intel warnings to subfolder, update autotools filesAllen Byrne2020-04-069-100/+118
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| | | | | | | | | * | | | | | | Corrected noteAllen Byrne2020-04-061-3/+3
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| | | | | | | | | * | | | | | | Remove overzealous additionsAllen Byrne2020-04-052-3/+1
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| | | | | | | | | * | | | | | | Correct whitespace in flags, force list modeAllen Byrne2020-04-054-15/+15
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| | | | | | | | | * | | | | | | Flag construction must be after compiler detectionAllen Byrne2020-04-0512-386/+507
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| | | | | | | | | * | | | | | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-04-052-2/+2
| | | | | | | | | |\ \ \ \ \ \ \ | | | |_|_|_|_|_|_|/ / / / / / / | | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '5d1590079ea0061a7b86d7210cb796b6d58a17c7': Skip testing of passthrough VOL connector in a Family File tools test Restore previous tools library driver name behavior with passthrough VOL connector
| | * | | | | | | | | | | | | | Merge pull request #2490 in HDFFV/hdf5 from tools_vol_update to developJordan Henderson2020-04-032-2/+2
| | |\ \ \ \ \ \ \ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'a5a2fb44296327787476407a249d9470b3c80427': Skip testing of passthrough VOL connector in a Family File tools test Restore previous tools library driver name behavior with passthrough VOL connector
| | | * | | | | | | | | | | | | | Skip testing of passthrough VOL connector in a Family File tools testJordan Henderson2020-04-031-1/+1
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| | | * | | | | | | | | | | | | | Restore previous tools library driver name behavior with passthrough VOL ↵Jordan Henderson2020-04-031-1/+1
| | | | |_|/ / / / / / / / / / / | | | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | connector
| | | | | | | | | * | | | | | | TRILAB-192 add c++ and fortran warnings build systems one fileAllen Byrne2020-04-0539-925/+581
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| | | | | | | | | * | | | | | | Update release note for CMake warningsAllen Byrne2020-04-031-0/+2
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| | | | | | | | | * | | | | | | Add missing header includeAllen Byrne2020-04-031-0/+1
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| | * | | | | | | | | | | | | Merge pull request #2474 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2020-04-039-7/+130
| | |\ \ \ \ \ \ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '36b8060323f24341c8f4610108e8ccb955dbe192': Correct extra flags TRILAB-192 remove comment TRILAB-192 add comparable clang flags
| | | * \ \ \ \ \ \ \ \ \ \ \ \ Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-04-023-18/+18
| | | |\ \ \ \ \ \ \ \ \ \ \ \ \ | | | |/ / / / / / / / / / / / / | | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'ac099b0b6391fd149af4f4fcf8f79189dcc615bb': Fixed unnecessary H5R casts in the tools that were raising warnings.
| | * | | | | | | | | | | | | | Merge pull request #2485 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-04-023-18/+18
| | |\ \ \ \ \ \ \ \ \ \ \ \ \ \ | | | |_|_|_|_|/ / / / / / / / / | | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop * commit '1c854737665f3f853a324c34292390ab57431fec': Fixed unnecessary H5R casts in the tools that were raising warnings.