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* Merge branch 'develop' into mdc_sl_optmainzer2020-08-15364-10247/+6767
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| * Merge pull request #2765 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-08-141-10/+10
| |\ | | | | | | | | | | | | | | | | | | to develop * commit '3feeb8ec20a7b08acdcd77f3e10c8c93818d890e': Fixes naming issues in H5VM inline functions
| | * Fixes naming issues in H5VM inline functionsDana Robinson2020-08-141-10/+10
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| * Merge pull request #2753 in HDFFV/hdf5 from ~EPOURMAL/hdf5_ep:develop to developElena Pourmal2020-08-142-54/+70
| |\ | | | | | | | | | | | | | | | | | | * commit 'c6248cfb6975a6ecadf0259390247ce05dc13c4b': Addresseda Dana's comments from the pull request. Fixed several typos in the comments found by Larry during the review. The H5DSis_scale function was updated to return "not a dimension scale" (0) instead of failing (-1), when CLASS or DIMENSION_SCALE attributes are not written according to Dimension Scales Specification (HDFFV-10436).
| | * Addresseda Dana's comments from the pull request.Elena2020-08-141-29/+32
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| | * Fixed several typos in the comments found by Larry during the review.Elena2020-08-121-3/+3
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| | * Merge branch 'develop' of ↵Elena2020-08-122-6/+6
| | |\ | | | | | | | | | | | | https://bitbucket.hdfgroup.org/scm/~epourmal/hdf5_ep into develop
| | * | The H5DSis_scale function was updated to return "not a dimension scale" (0)Elena2020-08-122-42/+55
| | | | | | | | | | | | | | | | | | | | instead of failing (-1), when CLASS or DIMENSION_SCALE attributes are not written according to Dimension Scales Specification (HDFFV-10436).
| * | | Merge pull request #2744 in HDFFV/hdf5 from remove_unneeded_tagging to developQuincey Koziol2020-08-148-46/+54
| |\ \ \ | | | | | | | | | | | | | | | | | | | | * commit 'cb5de74ac26158f6f541eed2e0dddb50d4d197d6': Remove redundant calls to set the metadata cache tag
| | * \ \ Merge remote-tracking branch 'origin/develop' into remove_unneeded_taggingQuincey Koziol2020-08-14364-10201/+6708
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| * | | | Merge pull request #2739 in HDFFV/hdf5 from namespace_cleanup_01 to developQuincey Koziol2020-08-14359-10156/+6651
| |\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '3f46a380e084d83a84783383bdfbbd9a443e9f27': Correct typos w/HGOTO_DONE & HGOTO_ERROR Move H5T_vlen_reclaim to package scope Switch H5VM inline routines back to single underscope and put a comment in their header about this naming Clean up private / package / static namespace issues (function naming, which header file, FUNC_ENTER / LEAVE, etc). Removed remaining personal email addresses from library source code (still needs cleaned from other directories). Misc. warning, style, and whitespace cleanup.
| | * \ \ \ Merge remote-tracking branch 'origin/develop' into namespace_cleanup_01Quincey Koziol2020-08-122-6/+6
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| | * | | | Merge remote-tracking branch 'origin/develop' into namespace_cleanup_01Quincey Koziol2020-08-113-24/+32
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| | * | | | Merge remote-tracking branch 'origin/develop' into namespace_cleanup_01Quincey Koziol2020-08-104-8/+9
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| | * | | | | Correct typos w/HGOTO_DONE & HGOTO_ERRORQuincey Koziol2020-08-107-50/+47
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| | * | | | | Move H5T_vlen_reclaim to package scopeQuincey Koziol2020-08-074-6/+6
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| | * | | | | Merge remote-tracking branch 'origin/develop' into namespace_cleanup_01Quincey Koziol2020-08-07147-952/+1997
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| | * | | | | | Switch H5VM inline routines back to single underscope and put a comment in ↵Quincey Koziol2020-08-0640-166/+214
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | their header about this naming
| | * | | | | | Clean up private / package / static namespace issues (function naming, whichQuincey Koziol2020-08-06362-10270/+6711
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | header file, FUNC_ENTER / LEAVE, etc). Removed remaining personal email addresses from library source code (still needs cleaned from other directories). Misc. warning, style, and whitespace cleanup.
| * | | | | | | Merge pull request #2762 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-08-131-2/+2
| |\ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop * commit 'b806f3e9acad6261438dacecbb11a87bcd644e72': Tweak to hide unused threadsafe callback in non-threadsafe builds
| | * | | | | | | Tweak to hide unused threadsafe callback in non-threadsafe buildsDana Robinson2020-08-131-2/+2
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| | | | | | | * Merge remote-tracking branch 'origin/develop' into remove_unneeded_taggingQuincey Koziol2020-08-125-30/+38
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| | | | | | | * Merge remote-tracking branch 'origin/develop' into remove_unneeded_taggingQuincey Koziol2020-08-101-6/+6
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| | | | | | | * Remove redundant calls to set the metadata cache tagQuincey Koziol2020-08-088-46/+54
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* | | | | | | | Tab to space conversions.mainzer2020-08-147-465/+463
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Re-applied tab to space conversions accidentally reverted in the commit of the metadata cache skip list optimization, and performed some additional tab to space conversions in passing. Tested parallel / debug on Jelly.
* | | | | | | | Merge branch 'develop' into mdc_sl_optmainzer2020-08-13196-3757/+5236
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| * | | | | | | Merge pull request #2756 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2020-08-132-4/+13
| |\ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'c5cb9534b27760596bfd0c4cdf1db31fd2bac2a7': spelling HDFFV-11127 - force RTLD_LOCAL in dlopen
| | * \ \ \ \ \ \ Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-08-131-13/+14
| | |\ \ \ \ \ \ \ | | |/ / / / / / / | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'baf7ebc4ca4eeecb11a607f420a5d5b95169eed5': Cleans warnings and cruft from ttsafe_attr_vlen.c Fixes Windows issues due to exposed pthread code
| * | | | | | | | Merge pull request #2760 in HDFFV/hdf5 from ↵Dana Robinson2020-08-131-13/+14
| |\ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:ttsafe_windows_fix to develop * commit '04b24163f7f08248a58d256371e088c8cc7816c8': Cleans warnings and cruft from ttsafe_attr_vlen.c Fixes Windows issues due to exposed pthread code
| | * | | | | | | | Cleans warnings and cruft from ttsafe_attr_vlen.cDana Robinson2020-08-121-11/+9
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| | * | | | | | | | Fixes Windows issues due to exposed pthread codeDana Robinson2020-08-121-4/+7
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| | * | | | | | | spellingAllen Byrne2020-08-131-1/+1
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| | * | | | | | | HDFFV-11127 - force RTLD_LOCAL in dlopenAllen Byrne2020-08-122-4/+13
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| * | | | | | | Merge pull request #2754 in HDFFV/hdf5 from ↵Dana Robinson2020-08-123-26/+28
| |\ \ \ \ \ \ \ | | |_|_|_|_|/ / | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:testhdf5_ref_valgrind to develop * commit '4f0283db788fc1a0db94e7825567210021b3b594': Fixes a size mismatch when copying old-style to new-style references Fixes memory leads in trefer.c
| | * | | | | | Fixes a size mismatch when copying old-style to new-style referencesDana Robinson2020-08-123-6/+6
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| | * | | | | | Fixes memory leads in trefer.cDana Robinson2020-08-121-20/+22
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| * | | | | | Merge pull request #2752 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-08-122-6/+6
| |\ \ \ \ \ \ | | |_|_|_|/ / | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop * commit '78c6be05a84f854074a4df2e10c15a56444e4015': Fixes the splitter VFD test on Windows.
| | * | | | | Fixes the splitter VFD test on Windows.Dana Robinson2020-08-122-6/+6
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| * | | | | | Merge pull request #2746 in HDFFV/hdf5 from bmr_HDFFV-10591-2 to developBinh-Minh Ribler2020-08-112-15/+21
| |\ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Part of HDFFV-10591 fix. * commit 'f863d4f970c2f54298a69f95bb6a15e710e1ed75': Addition to HDFFV-10591
| | * | | | | | Addition to HDFFV-10591Binh-Minh Ribler2020-08-092-15/+21
| | | |_|_|_|/ | | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description Added missing parameter description and improved format. Platforms tested: Linux/64 (jelly)
| * | | | | | Merge pull request #2655 in HDFFV/hdf5 from ~JHENDERSON/hdf5:develop to developJordan Henderson2020-08-101-9/+11
| |\ \ \ \ \ \ | | |_|_|_|_|/ | |/| | | | | | | | | | | | | | | | | | | * commit '7c3d4402d730789173e413b48951fede5f6932f3': Fix issue in H5VL_wrap_register where datatype VOL objects are casted to H5T_t *
| | * | | | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Jordan Henderson2020-08-05193-8560/+9331
| | |\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'f59bb712dec221a076728b6c582818bcf814d71a': (55 commits) Fixes indenting in tools test scripts Minor normalizations with 1.12 branch Fixed bad parens in H5trace.c Minor normalizations with hdf5_1_10 Mingw copy disabled Warnings reduction in tools Correct reference file Correct h5diff filenames Fixed typos in error messages. Updated the Java tests to deal with H5Sset_extent_none changes Fixed additional typos in tselect.c comments. Fixes typo in tselect.c Updates H5Sset_extent_none() to set H5S_NULL Only one line needed to compare Revert err file Minor normalization with 1.10 branch Fix HDFFV-11120 and HDFFV-11121 (CVE-2018-13870 and CVE-2018-13869) revert error-stack enable Minor normalization with 1.10. Add release notes for tools ...
| | * | | | | | Fix issue in H5VL_wrap_register where datatype VOL objects are casted to H5T_t *Jordan Henderson2020-06-191-9/+11
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| * | | | | | | Merge pull request #2748 in HDFFV/hdf5 from ↵Dana Robinson2020-08-101-6/+6
| |\ \ \ \ \ \ \ | | |_|_|/ / / / | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:flock_windows_fix to develop * commit '0ed65346033e7fbc71634d4911f9761e2ec145b2': Fixes flock Windows failure
| | * | | | | | Fixes flock Windows failureDana Robinson2020-08-071-6/+6
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| * | | | | | Merge pull request #2741 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-08-073-2/+3
| |\ \ \ \ \ \ | | |/ / / / / | |/| | | / / | | | |_|/ / | | |/| | | | | | | | | | | | | | | to develop * commit 'a975a8d0eb3244d1a08afc80133a12279d1f90e5': Removes unsuffixed float warnings
| | * | | | Removes unsuffixed float warningsDana Robinson2020-08-073-2/+3
| |/ / / / | | | | | | | | | | | | | | | These warnings can only be addressed with gnu extensions.
| * | | | Merge pull request #2740 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:code_tidy to ↵Dana Robinson2020-08-07110-657/+546
| |\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | develop * commit '5ce2a178043d9749d30076a2e62249d9998c40ec': Removes staff email addresses from the repository Removes redundant C library headers from hl library
| | * | | | Removes staff email addresses from the repositoryDana Robinson2020-08-07110-657/+546
| |/ / / / | | | | | | | | | | | | | | | Removes redundant C library headers from hl library
| * | | | Merge pull request #2730 in HDFFV/hdf5 from ↵Dana Robinson2020-08-0639-310/+1457
| |\ \ \ \ | | |_|_|/ | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:file_locking_squash_2 to develop * commit '47ad0ac7237b464e939fe54dd129a151944d9706': Renames BEST-EFFORT to BEST_EFFORT for file locking env var Updated the file locking Fortran property list wrappers and added a test. Fixed missing parens in VFDs Minor change to header comments in file locking C++ changes. Squash merge of file locking fixes