| Commit message (Collapse) | Author | Age | Files | Lines |
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H5Dget_access_plist
functions to 1.8 branch
Tested: kagiso, jam (trunk version tested with h5committest)
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The information of libhdf5_fortran.settings are all included in
libhdf5.settings now. Remove it from the source.
Tested: kagiso with fortran and C++.
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Description: Improved external link traversal of h5dump. h5dump will now
properly avoid all cycles, even those spanning multiple files. Improvement
to the output of committed datatypes. Committed datatypes are now checked
for uniqueness (like other objects). Tests added for these cases.
Tested: kagiso, linew, smirom (h5committest)
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return 2 instead of -1 on error status
Tested: windows, linux
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tested: linux
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Description:
Many new source files were added from the freespace branch. This checkin adds the code to Windows as well.
Note: Some tests are still failing on Windows, but this checkin brings us closer to fixing them. In particular, freespace test fails on compile (Quincey is working on it), and the DLL links test fails at runtime (I'll look into it)
Tested:
VS2005 on WinXP
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Description: Added -E option to h5ls. When set, this alows h5ls to enter
external files (currently only through an external link). The -r option by
itself will no longer allow h5ls to traverse external links.
Tested: kagiso, linew, smirom (h5committest)
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Bring r15800 back from trunk:
- File free space branch changes through r15794
Tested on:
Mac OS X/32 10.5.5 (amazon) in debug mode
Mac OS X/32 10.5.5 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
in debug mode
Linux/64-amd64 2.6 (smirom) w/Intel compilers w/default API=1.6.x,
w/C++ & FORTRAN, in production mode
Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
w/szip filter, in production mode
Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
in production mode
Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode
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tested: linux
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tested: linux
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Tested: linux
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Made changes to reflect the changes made in the fortran directory which merged the fortran trunk into the 1.8 branch.
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windows shell script only Note: for the unix shell script this file is not used
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tested: linux
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tested: linux
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Bug fix #1281
The TEXTFPE was described in the usage (read floats in scientific notation) but was not implemeneted.
Solution:
remove TEXTFPE from the help system and have the TEXTFPE input type do
the same thing as TEXTPF currently does to support backwards compatibility (the format read for both TEXTFPE and TEXTPF is %f)
added a test
2)
renamed configuration files to have the extension .conf
tested: windows, linux
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Tested: kagiso
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Update MANIFEST w/changes to files.
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Description: Adds capability to h5ls to traverse external links when the -r
(recursive) option is given. Changes to the way absolute path names are patched
in h5trav.c. Changes to the way recursive traversal starting from a non-root
group is handled (which also fixes some preexisting issues). Tests added for
these cases.
Tested: kagiso, smirom, linew (h5committest)
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Description:
In in Fortran source code, there was a great deal of code that was necessary for Windows DLLs, and ignored for others systems. To remove some of the bloat in the source code, we moved these definitions into separate *.def file, which will be used on by the Windows DLL project.
Tested:
VS2005 on WinXP
Note: The Windows project file will still need to be edited-- I will check that in soon.
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Tested on kagiso, smirom, and linew.
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reference count
> 1.
Description: Added a new field 'app_count' to H5I_id_info_t struct, to track
the reference count on an id due to the application. the old 'count' field
tracks the total. Generally any id visible to the application gets placed
in app_count. Added app_ref boolean parameter to H5I_inc_ref, H5I_dec_ref,
H5I_register, H5I_clear_type, and a few other functions, to specify whether
the operation(s) being performed on the id(s) are due to the application
(TRUE) or not (FALSE). Test added for this case.
Tested: kagiso, smirom, linew (h5committest)
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Description:
In library code, we try not to use system calls directly, but instead use the HD{function} macro instead. This way, we can map special versions of the call on particular systems. Previously, it was all done in H5private.h. However, in an effort to clean up platform-specific definitions, we move all of the Windows macros into a separate file, win32defs.h. This way, we can use the non-Posix versions that Visual Studio sends warnings about.
Some macros are set specifically in the platform-specific header files. Then, any macros left unset will be set by the "default" implementation in H5private.h.
This checkin also cleans up various source files to use the HD* macros when possible.
Tested:
VS2005 on WinXP
VS.NET on WinXP
h5committest (kagiso, linew, smirom)
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bug fixes.
Description:
Added code to create an empty hdf5 (named h5diff_empty.h5) in order to test
if h5diff compares correctly an empty hdf5 vs. a non-empty one.
Tested:
Tested in kagiso of h5diffgentest itself.
Verified by h5dump that h5diff_empty.h5 was indeed empty.
Then "h5diff h5diff_empty.h5 h5diff_basic1.h5" returned 0 (should have
returned non-zero).
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Brought revision 15133 back from trunk:
Fixed bug in h5ls that prevented relative group listings (like
"h5ls foo.h5/bar") from working correctly.
Tested on:
Mac OS X/32 10.5.3 (amazon)
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Description:
Previously, we maintained some source files that are commonly generated dynamically on other systems. Now, we also generate them on Windows as well. We should remove them from the repository so old versions are not accidentally used.
Also, clean up the project files to organize generator programs.
Tested:
VS2005 on WinXP
VS2005 on WinXP x64
VS.NET on WinXP
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Studio 2005
Description:
On Windows, we receive many compiler warnings because Microsoft has implemented many "security-enhanced" versions of POSIX functions. However, the old versions still exist, so the warnings can be ignored. By setting a preprocessor definition, we can disable many of these warnings. On a typical HDF5 build, this reduces the number of warnings from ~1500 to ~600
Tested:
VS2005 on WinXP
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Description:
There were a number of small tweaks we needed to make to add the new fortran_1_8 code on Windows. We create new project files, add new source to them, add the test to our test suite, and fix a few typos in the Windows-specific source code.
Tested:
VS2005 on WinXP
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svn merge -r 14824:14945 http://svn.hdfgroup.uiuc.edu/hdf5/trunk/perform
command to bring changes in.
Platforms tested: kagiso with Intel compilers, smirom with GNU compiler
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Usage is
-m T, --format=T
Where T - is a string containing the floating point format, e.g '%.3f'
The test consists of writing a number with 7 fractional digits (default precision display of %f is 6 digits) and have the 7 digits displayed with
-m %.7f fpformat.h5
Tested: windows, linux, solaris
Note: the output file was generated in linux, it may be possible that platforms other than the ones tested have a different representation of the number
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Platforms tested: bin/chkmanifest on kagiso
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hdf5_1_8 branch
(used svn merge -r 14505:14941 http://svn.hdfgorup.uiuc.edu/hdf5/trunk/fortran
command).
Updated MANIFEST
Disabled -O3 optimization for gcc 4.3 (long due check-in)
Platforms tested: kagiso with PGI compilers, smirom with g95 and v16 option, linew
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Bring revision 14860 back to 1.8 branch, change log for rev 14860 is:
Omnibus raw data I/O revisions, with wide-ranging changes and
refactoring, in order to prepare for implementing "fast append" feature.
These changes remove the majority of the code duplication for raw data
I/O which has crept in over the last ten years and introduces a more object-
oriented design for operating on different types of dataset storage.
Description:
Omnibus raw data I/O revisions, with wide-ranging changes and
refactoring, in order to prepare for implementing "fast append" feature.
These changes remove the majority of the code duplication for raw data
I/O which has crept in over the last ten years and introduces a more object-
oriented design for operating on different types of dataset storage.
Chunked storage no longer has it's own I/O routines, it is now handled
as either contiguous (if chunk is not pulled into the cache) or compact (if the
chunk is cached in memory).
No bug or feature changes, at least intentionally... :-)
Tested on:
Mac OS X/32 10.5.2 (amazon) w/production
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Description:
The ohdr_gentst project exists in order to re-create test input files that are distributed with the source. These projects aren't built by default on most platforms, and the source isn't distributed in release builds. To avoid confusion and bloat, we remove the Windows version of this project.
Tested:
None, only removed
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Description:
The Windows suite of examples for HL C was a very small subset of the examples that exist for other platforms. Now we have all of the HL C examples-- integrated into the VS projects files, and batch test scripts.
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and prepared RELEASE.txt
for future entries.
Changed version number to 1.8.0-snap0
Added HISTORY-1_8.txt to MANIFEST
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1.8.0 release tar ball.
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Details:
We no longer support Visual Studio 6.0, so we note it in the documentation. Also, updated the path references in VS.NET documentation
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Description:
Minor edit to MANIFEST, delete a few entries I missed last time. This brings it up to date.
Tested:
chkmanifest on smirom
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Description:
Update the MANIFEST for the files I've just addeed/removed.
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Add work-around to allow reading files that were produced with a buggy
earlier version of the library, which could create objects with the wrong
object header message count. There is now a configure flag
"--enable-strict-format-checks" which triggers a failure on reading a file
with this sort of corruption (when enabled) and allows the object to be read
(when disabled). The default value for the "strict-format-checks" flag is
yes when the "debug" flag is enabled and no when the "debug" flag is disabled.
Note that if strict format checks are disabled (allowing objects with
this particular kind of corruption to be read) and the file is opened with
write access, the library will re-write the object header for the corrupt
object with the correct # of object header messages.
This closes bugzilla bug #1010.
Tested on:
FreeBSD/32 6.2 (duty) in debug mode
FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
in debug mode
Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
in production mode
Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
in production mode
Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
w/szip filter, in production mode
Mac OS X/32 10.4.10 (amazon) in debug mode
Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
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Updated utilities test scripts to make output more legible; fixed some typos.
Added four new expected output files to avoid false negative reports
for the h5dump tests (for ones that expect to have error report in them).
Updated MANIFEST to reflect the changes.
Platforms tested:
VMS server (more testing is on the way)
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Refactor file space allocation routines into separate source module.
Tested on:
FreeBSD/32 6.2 (duty) in debug mode
Mac OS X/32 10.4.10 (amazon) in debug mode
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dataspace selection. Added a test
for it, too. This round of checkin isn't well tarnished yet. I'll come back to work on Jan. 8. I'll revise it then.
Tested it on kagiso, smirom, linew.
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removed obsolete command file
Platforms tested: VMS server
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