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* Develop normalization with vol_integration.Dana Robinson2018-09-191-1/+1
| | | | | Mostly peripheral things like the tools and wrappers, with just enough core library code to support that.
* Update MANIFEST file for new t_coll_md_read.c fileJordan Henderson2018-08-271-0/+1
| | | Remove old line from copyright notice
* Update cmake warnings to match the autotools files betterAllen Byrne2018-08-161-0/+1
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* Add test file with unwritten datasetsAllen Byrne2018-07-241-0/+2
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* Updated for C2Cppfunction_map.htmBinh-Minh Ribler2018-07-231-1/+1
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* Added class DSetAccPropListBinh-Minh Ribler2018-07-221-0/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: - Added class DSetAccPropList for the dataset access property list. - Added wrapper for H5Dget_access_plist to class DataSet // Gets the access property list of this dataset. DSetAccPropList getAccessPlist() const; - Added wrappers for H5Pset_chunk_cache and H5Pget_chunk_cache to class DSetAccPropList // Sets the raw data chunk cache parameters. void setChunkCache(size_t rdcc_nslots, size_t rdcc_nbytes, double rdcc_w0) // Retrieves the raw data chunk cache parameters. void getChunkCache(size_t &rdcc_nslots, size_t &rdcc_nbytes, double &rdcc_w0) - Added two more arguments to H5Location::createDataSet: const DSetAccPropList& dapl = DSetAccPropList::DEFAULT const LinkCreatPropList& lcpl = LinkCreatPropList::DEFAULT - Added one more argument to H5Location::openDataSet: const DSetAccPropList& dapl = DSetAccPropList::DEFAULT Platforms tested: Linux/64 (jelly) Linux/32 (jam) Darwin (osx1010test)
* TRILAB-31 Working locallyAllen Byrne2018-07-161-0/+3
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* Merge pull request #1129 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2018-07-131-0/+8
|\ | | | | | | | | | | | | | | | | | | | | develop * commit '08de02c838c05993fea5febb9c320a679e7f841a': Changes based on feedback from pull request. Fix test_misc33() in test/tmisc.c Open the test file read-only so that it can be accessed for testing. Modifications made based on feedback from pull request. Fix for HDFFV-10333: 1) Check for valid object header version for a refcount messge 2) Check for invalid fill value size 3) Check for invalid dimension size in a layout message 4) Add --enable-error-stack option to h5stat 5) Add error checks to h5stat.c 6) Add tests to h5stat and h5dump Fix daily test failure.
| * Modifications made based on feedback from pull request.Vailin Choi2018-07-111-0/+8
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* | Update Java util lib, Refactor H5D write VL to match readAllen Byrne2018-06-271-3/+3
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* Fixed MANIFESTDana Robinson2018-06-011-2/+3
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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Vailin Choi2018-05-231-4/+36
|\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '2b0fb7e3f1f7da5b23d430702493ed4fb7f87166': (21 commits) HDFFV-9739 only executes H5E tests in production Remove link flag from compile command fix typo Add release note Correct attribute location HDFFV-9739 fix copy testfiles command HDFFV-9739 remove obsolete test files HDFFV-9739 dup test file for concurrent tests HDFFV-9739 Fix autotools script HDFFV-9739 Change autotools test scripts Fix typo HDFFV-9739 Update test reference Update current windows test machines HDFFV-9739 Grab err number before API call HDFFV-9739 Add release note Adjust test names for concurrent tests Fix soversion HDFFV-9739 Fix copy name HDFFV-9739 factor out tests into separate JUnit Updated the threadsafety test to use error macros instead of asserts. ...
| * HDFFV-9739 remove obsolete test filesAllen Byrne2018-05-211-4/+0
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| * HDFFV-9739 factor out tests into separate JUnitAllen Byrne2018-05-151-0/+36
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* | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Vailin Choi2018-05-141-0/+2
|\ \ | |/ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'dcc66a4f157ace0858b788228550f3e104df3242': (35 commits) GGC requires attribute before function Correct COMPILE defs usage Add missing module_dir property Text cleanup Correct sentence punctuation. Add release note. Use set_property for MT flag Correct command usage Remove APPEND Fix typo Add missing test lib add missing folder to path Fix another command revert Missed a command revert Revert to old style for LINK_FLAGS gen expr not working LINK_FLAGS must be separate property sets Fix link flags syntax Revert refactor link flags refactor link flags to interface Refactor link flags ...
| * TRILABS-20 Fix fortran configure during fix of CXX configureAllen Byrne2018-04-241-0/+2
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* | Fix for HDFFV-10180 Performance issues with H5Oget_info.Vailin Choi2018-04-241-0/+1
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* Add missing fileAllen Byrne2018-04-121-0/+1
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* Fix Java test for DEBUG_APISAllen Byrne2018-04-091-0/+2
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* Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Quincey Koziol2018-03-181-14/+39
|\ | | | | | | | | | | merge_func_enter_vol Plus initial steps toward merging API context push into FUNC_ENTER_API* macros
| * Merge pull request #931 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2018-03-121-0/+23
| |\ | | | | | | | | | | | | | | | | | | | | | develop * commit 'f08b8fa10e7bac5ae26e3b06f938d38ebb3f28e1': Enhancement to the tool h5clear (HDFFV-10360) Fix for HDFFV-10209 VDS SWMR test failure Free the object header when there are chksum retries.
| | * Enhancement to the tool h5clear (HDFFV-10360)Vailin Choi2018-03-121-0/+23
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| * | Remove obsolete filesAllen Byrne2018-03-121-7/+0
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| * | Updated MANIFEST for H5LcreatProp.[h,cpp]Binh-Minh Ribler2018-03-121-0/+2
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| * | HDFFV-4359 Add C,HL,CXX filesAllen Byrne2018-03-081-0/+2
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| * Merge pull request #901 in HDFFV/hdf5 from ↵Binh-Minh Ribler2018-03-071-0/+1
| |\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~BMRIBLER/version_bounds_bmr:develop to develop tests for version bounds. * commit 'f05f9d4cffab5e008c67e19034c1b248e1b01b3c': Miscellaneous test fixes Description: - dtypes.c: added the use of highest version of nested datatypes to verify the datatype's version. - miscellaneous typos Platforms tested: Linux/64 (jelly) Darwin (osx1010test) Added h5repack tests Description: Added tests SUPERBLOCK and INVALIDBOUNDS, composed by ADB. Platforms tested: Linux/64 (jelly) - cmake Added bounds_latest_latest.h5 Misc improvement Description: - Added test file for h5repack test VERIFY_INVALIDBOUNDS - Updated MANIFEST - Removed unnecessary header file in test - Update h5repack script to copy the new file to the test location Platforms tested: Linux/64 (jelly) Darwin (osx1010test) Improving tests Description: - Added test for version bounds with nested datatypes - Added script for additional version bound test in h5repack - Cleaned up tests for consistency - Removed extra included header files Platforms tested: Linux/64 (jelly) Linux/64 (moohan) Darwin (osx1010test)
| | * Misc improvementBinh-Minh Ribler2018-02-281-0/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: - Added test file for h5repack test VERIFY_INVALIDBOUNDS - Updated MANIFEST - Removed unnecessary header file in test - Update h5repack script to copy the new file to the test location Platforms tested: Linux/64 (jelly) Darwin (osx1010test)
| * | Inc CMake min, Add new tests, rework test CMake filesAllen Byrne2018-02-271-0/+1
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| * Merge pull request #876 in HDFFV/hdf5 from ↵Vailin Choi2018-02-141-0/+1
| |\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~VCHOI/my_hdf5_fork:bugfix/version_bounds to develop * commit 'b4294d8d3e5937527e9814f23d04df412ebbe770': Added comment for clarification about latest as 1.10. Platforms tested: Linux/64 (jelly) Linux/32 (jam) Fixed typos Platforms tested: Linux/32 (jam) Additional tests Description: - Revised and add more variety to version bound tests per review - Revised gen_bounds.c per review Platforms tested: Linux/64 (jelly) Linux/32 (jam) Darwin (osx1010test) Added gen_bounds Cleaned up per comments in PR# 876 Modifications made based on comments from pull request. Added gen_bounds.c Added gen_bounds.c Fix bounds check for the generation of cache image. Modify usage description for -j and -k options so that it is more informative. Modify h5repack usage so that it is more descriptive. Changes made based on code reviews. Further improvement Fixed comment. Adding data file generator Description: Added gen_bounds.c to generate the following files: - bounds_earliest_latest.h5 - bounds_earliest_v18.h5 - bounds_latest_latest.h5 - bounds_v18_latest.h5 - bounds_v18_v18.h5 for testing the version bounds fix in 1.8 and 1.6. Initial checkin for library version bounds Code changes to provide versioning support when adding to the enumerated defines for H5F_libver_t.
| | * Added gen_bounds.cBinh-Minh Ribler2018-02-011-0/+1
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| * | HDFFV-10398 use the simpler add_subdirectory signatureAllen Byrne2018-01-301-1/+0
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| * HDFFV-9745 Create test and files to verify fixesAllen Byrne2018-01-041-3/+2
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| * HDFFV-8745 remove obsolete filesAllen Byrne2018-01-021-2/+0
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| * HDFFV-8745 - fix implementation of 8625Allen Byrne2018-01-021-1/+1
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| * HDFFV-9724 Corrected files and verified testsAllen Byrne2017-12-281-0/+6
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| * Revert "Merge pull request #826 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to ↵lrknox2017-12-221-6/+0
| | | | | | | | | | | | | | develop" This reverts commit b1223dd653e65e076af92b2dfe236f3704da81c8, reversing changes made to b25f123f5f5e25c1447a6a02861cb7c7265c12f2.
| * HDFFV-9724 Add H5LS prefix test with ${ORIGIN}Allen Byrne2017-12-131-0/+6
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* | Add API context interface and use it throughout the library.Quincey Koziol2018-03-151-0/+3
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* Added H5Oint.c file.Dana Robinson2017-11-141-0/+1
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* Merge pull request #762 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:h5r_cleanup to ↵Dana Robinson2017-11-091-0/+1
|\ | | | | | | | | | | | | develop * commit 'd0e32b545c41dcc36a69ab146b54b55e7ac9dc07': Split internal H5R functionality into H5Rint.c.
| * Split internal H5R functionality into H5Rint.c.Dana Robinson2017-11-081-0/+1
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* | Plugin test reworkDana Robinson2017-11-091-6/+6
|/ | | | Cleanup of plugin test code. Renames many files. Prep for VOL branch merge.
* New cmake MPI filesAllen Byrne2017-11-021-0/+6
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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2017-10-191-0/+1
|\ | | | | | | | | | | | | | | | | | | | | | | | | * commit '8a391887be263e0ba7f1ba659dcf6559b5a5e01a': in 'production' mode builds Make fixes to avoid test failures in 'production' mode builds Updated the code and RELEASE.txt note per comments from John Mainzer Try to address most of the issues raised by Dana in the code review Made edits suggested by John as part of the code review Update the MANIFEST and release_docs/RELEASE files Add a test for parallel reads of independent files using MPI subgroups Edits to the file open optimization and associated test code to bring them closer to the HDF5 library's unwritten coding standards. Also bug fix to repair a hang in testphdf5. The initial coding for the superblock read optization
| * Merge pull request #704 in HDFFV/hdf5 from optimize_superblock_read to developRichard Warren2017-10-131-0/+1
| |\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '3dde6d0e32461f46630f814a2fdfbd4c813703bf': Updated the code and RELEASE.txt note per comments from John Mainzer Try to address most of the issues raised by Dana in the code review Made edits suggested by John as part of the code review Update the MANIFEST and release_docs/RELEASE files Add a test for parallel reads of independent files using MPI subgroups Edits to the file open optimization and associated test code to bring them closer to the HDF5 library's unwritten coding standards. Also bug fix to repair a hang in testphdf5. The initial coding for the superblock read optization
| | * Update the MANIFEST and release_docs/RELEASE filesRichard Warren2017-10-101-0/+1
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* | | Correct name of err fileAllen Byrne2017-10-181-1/+1
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* | | Fix name of output filesAllen Byrne2017-10-181-1/+1
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* | | Fix format convert error mask testAllen Byrne2017-10-181-0/+1
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* | | Fix tools error handling and valgrind issuesAllen Byrne2017-10-181-4/+6
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