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* Merge pull request #1400 in HDFFV/hdf5 from ↵Dana Robinson2018-12-311-0/+1
|\ | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:openmpi_tweaks to develop * commit 'd6c2a96ac2f103d90b96d5b39814810e6a31ef99': Updated the parallel install docs. Eliminated the need for a separate script variable. Added a helpful message to the flush script. Added a shell script so we can run the parallel flush test on OpenMPI.
| * Merge branch 'develop' into openmpi_tweaksDana Robinson2018-12-311-1/+20
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| * | Added a shell script so we can run the parallel flush testDana Robinson2018-12-201-0/+1
| | | | | | | | | | | | on OpenMPI.
* | | Merge branch 'develop' into yay_pluginsDana Robinson2018-12-281-1/+3
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| * | Merge branch 'develop' into md_cache_logging_squashDana Robinson2018-12-281-0/+5
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| * | | Squash merge of MDC logging changes.Dana Robinson2018-12-211-1/+3
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* | | | Added a simple test for registration of VOL connector plugins.Dana Robinson2018-12-271-6/+9
| |/ / |/| | | | | | | | | | | Autotools only for right now, but this will be fleshed out in future work.
* | | Merge pull request #1407 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2018-12-211-0/+5
|\ \ \ | |/ / |/| | | | | | | | | | | | | | | | | | | | * commit '991996b25122ff010b9af1bbb6cc05be491ce038': Remove unused CMake files Update option text Add reference file to list HDFFV-10656 remove moved source HDFFV-10656 Add CHECK_VOL support to CMake
| * | Remove unused CMake filesAllen Byrne2018-12-211-3/+0
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| * | HDFFV-10656 Add CHECK_VOL support to CMakeAllen Byrne2018-12-201-0/+8
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* | | Merge branch 'develop' into vol_tweaksDana Robinson2018-12-201-0/+4
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| * | HDFFV-10664 Add new functions and constants to java interfaceAllen Byrne2018-12-191-0/+4
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* | Moved private native VOL connector functions to H5VLnative_private.h.Dana Robinson2018-12-201-0/+1
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* | Split the native VOL connector code into multiple files andDana Robinson2018-12-201-0/+7
|/ | | | moved the attribute code over.
* HDFFV-10632 update new filesAllen Byrne2018-12-141-0/+2
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* HDFFV=10632 test cleanupAllen Byrne2018-12-061-12/+3
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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2018-12-051-3/+3
|\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '55e87e5b86aacbb37c57614cd2e869541291caad': (51 commits) Correct Windows build. Refactor allocating & releasing pass through wrapper objects. Fix typo Remove duplicated comment. Add a couple of missing prototypes for static routines, along with updating a comment from VOL plugin -> connector. Switch H5VL_class_value_t from unsigned to int, and add "invalid" ID value. Correct "make check-vol" regression test target. Switch H5VL_class_value_t from enum to unsigned integer Add support for "make check-vol", along with a few minor cleanups, etc. Refactor infrastructure for setting FAPL information from environment variables during testing, including connecting native, pass-through, and dynamically loaded VOL connectors. Also bring native and pass-through VOL connectors into alignment, removing the "H5VLnative_private.h" header. Remove example VOL connector, since it's been superceded by the pass-through VOL connector in the src subdirectory. Add pass-through VOL connector Update API tracing info for VOL functions and regenerate trace macros for VOL API calls. Added 'notify' callback for async requests; switched VOL class and info comparison to return comparison value as parameter, so they can return error values; "cancelled" -> "canceled"; switched order of 'wrap_object' and 'free_wrap_ctx' management callbacks. Add using FAPL from h5_fileaccess() to more tests. Remove unused test for unimplemented routine. Switch loc_params to VOL callbacks to pass struct by pointer instead of by value. Add info_to_str and str_to_info "management" callbacks for serializing and deserializing a connector's info object. Revert some of the changes to support the original property list value of metadata read attempts. Add VOL connector info to the flie access property list returned from H5Fget_access_plist(). Also, other misc. cleanups, etc. ...
| * Refactor infrastructure for setting FAPL information from environmentQuincey Koziol2018-11-281-1/+0
| | | | | | | | | | | | variables during testing, including connecting native, pass-through, and dynamically loaded VOL connectors. Also bring native and pass-through VOL connectors into alignment, removing the "H5VLnative_private.h" header.
| * Remove example VOL connector, since it's been superceded by the pass-throughQuincey Koziol2018-11-281-1/+0
| | | | | | | | VOL connector in the src subdirectory.
| * Add pass-through VOL connectorQuincey Koziol2018-11-281-0/+2
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| * Remove unused test for unimplemented routine.Quincey Koziol2018-11-221-1/+0
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| * Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Quincey Koziol2018-11-221-0/+5
| |\ | | | | | | | | | stackable_vol
| * \ Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Quincey Koziol2018-11-181-0/+1
| |\ \ | | | | | | | | | | | | stackable_vol
| * \ \ Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Quincey Koziol2018-11-041-6/+4
| |\ \ \ | | | | | | | | | | | | | | | stackable_vol
| * \ \ \ Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Quincey Koziol2018-10-251-1/+3
| |\ \ \ \ | | | | | | | | | | | | | | | | | | stackable_vol
| * | | | | Squashed commit of private branch changes to support stackable VOL plugins.Quincey Koziol2018-10-251-0/+1
| | | | | | | | | | | | | | | | | | | | | | | | modified: test/dsets.c
* | | | | | HDFFV-10632 - split stderr and stdout in cmakeAllen Byrne2018-12-031-18/+32
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* | | | | Move wait_H5init.cmake up to config/cmake.Larry Knox2018-11-201-1/+1
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* | | | | Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Larry Knox2018-11-201-0/+1
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| * | | | HDFFV-10601: Adding the new hdf5/tools/test/perform/chunk_cache.c to MANIFEST.Songyu Lu2018-11-161-0/+1
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* | | | Add script and changes to wait for H5Tinit.cLarry Knox2018-11-141-0/+5
|/ / / | | | | | | | | | | | | | | | | | | Add more sample batch scripts, specifically for sbatch, not for knl cross compile. Don't run parallel tests when no parallel test script is configured in HDF5options.cmake.
* | | Merge pull request #1313 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:vol_tweaks to ↵Dana Robinson2018-10-301-1/+0
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | develop * commit 'ee12aff2ca89e92b99590f29096794a84c6bacdc': Removed a couple of extraneous commas from VOL example. Cleaned up VOL example. Updated MANIFEST file. Fixed VOL example to use a platform-independent format specifier for size_t.
| * | | Updated MANIFEST file.Dana Robinson2018-10-301-1/+0
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* | | | Add script to run tests with sbatch when not cross compiling.Larry Knox2018-10-291-0/+4
|/ / / | | | | | | | | | Add new files to MANIFEST.
* | | Merge pull request #1305 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:cmake_tweaks ↵Dana Robinson2018-10-291-5/+0
|\ \ \ | |_|/ |/| | | | | | | | | | | | | | to develop * commit '62b92ddf4096d9b8f6235587ec16f34f6c6fa119': Makes the installed header files the same between the autotools and CMake.
| * | Makes the installed header files the same between the autotoolsDana Robinson2018-10-271-5/+0
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | and CMake. * CMake will no longer install private generated headers and tools library headers. * Several empty public header files (which represent internal packages) were removed. These were only installed by CMake. * Autotools installs will install H5FDwindows.h. Fixes HDFFV-10614.
* | | HDFFV-10608 Move toolchain files into a subfolderAllen Byrne2018-10-221-2/+2
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* | Split H5VLnative.h into public and private files and updatedDana Robinson2018-10-201-0/+1
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* | EED-258 Add modules uses toolchain filesAllen Byrne2018-10-181-0/+1
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* VOL FEATUREDana Robinson2018-10-101-0/+12
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* TRILABS-21 Add intel compiler supportAllen Byrne2018-10-041-0/+2
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* Develop normalization with vol_integration.Dana Robinson2018-09-191-1/+1
| | | | | Mostly peripheral things like the tools and wrappers, with just enough core library code to support that.
* Update MANIFEST file for new t_coll_md_read.c fileJordan Henderson2018-08-271-0/+1
| | | Remove old line from copyright notice
* Update cmake warnings to match the autotools files betterAllen Byrne2018-08-161-0/+1
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* Add test file with unwritten datasetsAllen Byrne2018-07-241-0/+2
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* Updated for C2Cppfunction_map.htmBinh-Minh Ribler2018-07-231-1/+1
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* Added class DSetAccPropListBinh-Minh Ribler2018-07-221-0/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: - Added class DSetAccPropList for the dataset access property list. - Added wrapper for H5Dget_access_plist to class DataSet // Gets the access property list of this dataset. DSetAccPropList getAccessPlist() const; - Added wrappers for H5Pset_chunk_cache and H5Pget_chunk_cache to class DSetAccPropList // Sets the raw data chunk cache parameters. void setChunkCache(size_t rdcc_nslots, size_t rdcc_nbytes, double rdcc_w0) // Retrieves the raw data chunk cache parameters. void getChunkCache(size_t &rdcc_nslots, size_t &rdcc_nbytes, double &rdcc_w0) - Added two more arguments to H5Location::createDataSet: const DSetAccPropList& dapl = DSetAccPropList::DEFAULT const LinkCreatPropList& lcpl = LinkCreatPropList::DEFAULT - Added one more argument to H5Location::openDataSet: const DSetAccPropList& dapl = DSetAccPropList::DEFAULT Platforms tested: Linux/64 (jelly) Linux/32 (jam) Darwin (osx1010test)
* TRILAB-31 Working locallyAllen Byrne2018-07-161-0/+3
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* Merge pull request #1129 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2018-07-131-0/+8
|\ | | | | | | | | | | | | | | | | | | | | develop * commit '08de02c838c05993fea5febb9c320a679e7f841a': Changes based on feedback from pull request. Fix test_misc33() in test/tmisc.c Open the test file read-only so that it can be accessed for testing. Modifications made based on feedback from pull request. Fix for HDFFV-10333: 1) Check for valid object header version for a refcount messge 2) Check for invalid fill value size 3) Check for invalid dimension size in a layout message 4) Add --enable-error-stack option to h5stat 5) Add error checks to h5stat.c 6) Add tests to h5stat and h5dump Fix daily test failure.
| * Modifications made based on feedback from pull request.Vailin Choi2018-07-111-0/+8
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