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* Merge pull request #704 in HDFFV/hdf5 from optimize_superblock_read to developRichard Warren2017-10-131-0/+1
|\ | | | | | | | | | | | | | | | | | | | | * commit '3dde6d0e32461f46630f814a2fdfbd4c813703bf': Updated the code and RELEASE.txt note per comments from John Mainzer Try to address most of the issues raised by Dana in the code review Made edits suggested by John as part of the code review Update the MANIFEST and release_docs/RELEASE files Add a test for parallel reads of independent files using MPI subgroups Edits to the file open optimization and associated test code to bring them closer to the HDF5 library's unwritten coding standards. Also bug fix to repair a hang in testphdf5. The initial coding for the superblock read optization
| * Update the MANIFEST and release_docs/RELEASE filesRichard Warren2017-10-101-0/+1
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* | Add/remove test filesAllen Byrne2017-10-031-1/+2
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* Change name for test results tableAllen Byrne2017-09-201-4/+4
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* Updated for C2Cppfunction_map.mhtBinh-Minh Ribler2017-09-181-0/+1
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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2017-09-051-0/+2
|\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'bf570b1a7ca3b9cbd4a59f0933a19ce1bcc99103': (71 commits) Amend tests to explicitly use H5Dcreate2 and H5Dopen2 Revert malloc's back to using hard-coded type for sizeof Minor comment refactoring Update documentation Finish up Parallel Compression test scaling work Partial update for scaling parallel filters tests Modify t_dset.c in lieu of Parallel Compression changes Updated H5C__flush_single_entry() in H5C.c to correct duplicate metadata write bug observed in 1.10.1. Amend MANIFEST Add test for write parallel; read serial case Fix uninitialized array issue in test Test updates Fix bug where incorrect amount of data was being read from the file Add data verification for first half of tests Start adding data verification Switch tests over to use testing macros Updates to parallel filters tests Move test files to testpar directory Add test file to build process Suggested changes from code review ...
| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Jordan Henderson2017-08-241-0/+6
| |\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '593e4038b3ab474a47e468bb3478d4ae3a6820e6': Fix for daily test failure Fix for the compilation error from the PGI compiler. Modifications based on comments from pull request review (1) Remove unnecessary asserts (2) Add code to insert bad offset values to the test file in gen_bad_offset.c HDFFV-10188 force non-native type description HDFFV-10188 emu insists on printing non-native description Fix for HDFFV-10216 segfault in H5G_node_cmp3 with corrupt h5 file Fix H5HL_offset_into() to return error when offset exceeds heap data block size. Also fix other places that call this routine to detect error return. HDFFV-10188 fix typo HDFFV-10188 add missing copy commands HDFFV-10188 Add tests and files HDFFV-10188 enable null space test HDFFV-10188 add release note HDFFV-10188 - Check for empty string first HDFFV-10188 error on NULL dataspace
| * | Amend MANIFESTJordan Henderson2017-08-111-2/+2
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| * | Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Jordan Henderson2017-08-111-0/+19
| |\ \ | | | | | | | | | | | | develop
| * | | Move test files to testpar directoryJordan Henderson2017-08-031-2/+2
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| * | | Add test file to build processJordan Henderson2017-08-031-0/+2
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* | | | HDFFV-9774 Add enable-error-stack argument to h5diffAllen Byrne2017-08-311-0/+12
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* | | Merge pull request #637 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2017-08-231-0/+2
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | develop * commit '1ef8577a4aaaa4120a819ff36747fdca99abdc26': Modifications based on comments from pull request review (1) Remove unnecessary asserts (2) Add code to insert bad offset values to the test file in gen_bad_offset.c Fix for HDFFV-10216 segfault in H5G_node_cmp3 with corrupt h5 file Fix H5HL_offset_into() to return error when offset exceeds heap data block size. Also fix other places that call this routine to detect error return.
| * | | Fix for HDFFV-10216 segfault in H5G_node_cmp3 with corrupt h5 fileVailin Choi2017-08-221-0/+2
| | |/ | |/| | | | | | | | | | Fix H5HL_offset_into() to return error when offset exceeds heap data block size. Also fix other places that call this routine to detect error return.
* | | HDFFV-10188 Add tests and filesAllen Byrne2017-08-211-0/+4
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* | Merge pull request #620 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2017-08-021-0/+12
|\ \ | | | | | | | | | | | | | | | | | | develop * commit '59e94f5009a1f738d9924be942448f8cf6355b00': Add h5repack tests for paged aggregation Add tests to h5repack.sh.in to verify options added for paged aggregation work as expected.
| * | Add h5repack tests for paged aggregationVailin Choi2017-07-291-0/+12
| | | | | | | | | | | | Add tests to h5repack.sh.in to verify options added for paged aggregation work as expected.
* | | HDFFV-10256 Add testAllen Byrne2017-08-011-0/+2
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* | | Merge branch 'develop' into h5pl_commitDana Robinson2017-08-011-0/+1
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| * | | HDFFV-10246 Add check for string not null before useAllen Byrne2017-07-251-0/+1
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* | | Major rework of H5PL package code before bringing VOL changesDana Robinson2017-07-141-0/+3
|/ / | | | | | | | | | | | | | | over. Brings coding standards in line with the rest of the library, enforces better software engineering principles, and makes everything more maintainable.
* | Include code fixes and additional modifications pointed out by code reviewersRichard Warren2017-07-101-0/+1
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* Fix for HDFFV-10160Vailin Choi2017-06-291-0/+2
| | | | Modifications to fix the assertion/abort failure when the application does not close the file.
* HDFFV-10219 - fix for native in bin file and possible non-native in h5 Allen Byrne2017-06-151-7/+1
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* HDFFV-10219: Added keyword SUBSET to h5import list.Allen Byrne2017-06-121-0/+2
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* HDFFV-8611 change h5repack to save the root group creation orderAllen Byrne2017-05-221-0/+1
| | | Added test and new arguments to control the the input file parsing.
* HDFFV-9055 add test filesAllen Byrne2017-05-171-0/+3
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* HDFFV-10186 xml test also needs endianess aware filesAllen Byrne2017-05-101-1/+2
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* HDFFV-10186 Add endianess to bitfield and fix testsAllen Byrne2017-05-101-1/+2
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* Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-251-7/+7
| | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
* Modifications based on review comments from pull request.Vailin Choi2017-04-201-0/+1
| | | | Made changes according to review comments and discussion with Allen.
* Fix for DAILYTEST-259 h5clear test failureVailin Choi2017-04-181-4/+7
| | | | | Deposit the test files in test/misc/testfiles for testh5clear.sh to use instead of depending on h5clear_gentest. Tested on kituo, osx1010test, quail, platypus and ostrich.
* updated with README changesM. Scot Breitenfeld2017-04-111-1/+0
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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2017-04-031-0/+1
|\ | | | | | | | | | | | | | | | | | | * commit '2412158ed8326a3f3d62fbd947e470667d0b5951': Add new file COPYING_LBNL_HDF5. Revert "Clear hdf5 1.10 entries from RELEASE.txt in the develop branch. Entries" Add LBNL license file and modify COPYING file accordingly. Omnibus checkin for several relatively minor modifications: Clear hdf5 1.10 entries from RELEASE.txt in the develop branch. Entries in this branch version of RELEASE.txt should be intended for the future 1.12.0 release. Fix HDFFV-8089 Description: Some code within an "ifdef H5D_CHUNK_DEBUG" block was using outdated data structure but not caught because the case of H5D_CHUNK_DEBUG being defined was never tested. It was commented out. I defined H5D_CHUNK_DEBUG, tested, and commented out again. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
| * Add new file COPYING_LBNL_HDF5.lrknox2017-03-301-0/+1
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* | HDFFV-10143 Fix initial issues from reviewAllen Byrne2017-03-301-0/+1
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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2017-03-141-6/+30
|\ | | | | | | | | * commit 'd0aeefd6455d6877afd934e238362636a86e4b42': Final merge of page buffering branch to develop
| * Final merge of page buffering branch to developQuincey Koziol2017-03-141-6/+30
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* | HDFFV-10138 Merge app framework to examplesAllen Byrne2017-03-141-0/+2
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* HDFFV-10128 fix string compare and add testsAllen Byrne2017-03-031-0/+6
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* Correct filename typoAllen Byrne2017-02-221-1/+1
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* Add new cmake options fileAllen Byrne2017-02-201-1/+2
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* Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Quincey Koziol2017-01-291-0/+32
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| * Moved remaining SWMR-related test files to develop.Dana Robinson2017-01-261-0/+32
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* | Cache image feature and testingQuincey Koziol2017-01-291-0/+6
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* Add autotools version of plugin tests for UD filtersAllen Byrne2017-01-171-0/+3
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* HDFFV-9994 add UD tests for toolsAllen Byrne2017-01-171-0/+10
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* HDFFV-10094: upgrade cmake command conventionsAllen Byrne2017-01-111-1/+0
| | | Also converted tests to use macros
* Description:Binh-Minh Ribler2017-01-051-0/+2
| | | | | | Added + ./c++/src/H5LaccProp.cpp + ./c++/src/H5LaccProp.h
* Added a missing test file needed for the flushrefresh script.Dana Robinson2016-12-301-0/+1
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