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* Correct pathAllen Byrne2020-05-201-1/+1
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* Add github actionsAllen Byrne2020-05-201-0/+2
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* TRILAB-244 separate CXX warnings and errors from CAllen Byrne2020-05-201-0/+3
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* TRILAB-192 - cleanup edits and match CMake CXX to autotoolsAllen Byrne2020-05-201-0/+1
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* Tidying of Mirror VFD.Jacob Smith2020-05-201-1/+1
| | | | | | | * Rename server-stop utility to mirror_server_stop. * Remove external dependency on bzero(). * Modify test/use_common to use only the public API. * Rename internal bitswap macro to follow convention.
* Add Splitter VFD to library.Jacob Smith2020-05-201-0/+21
| | | | | | | | | | | | | | | * "Simultaneous and equivalent" Read-Write and Write-Only channels for file I/O. * Only supports drivers with the H5FD_FEAT_DEFAULT_VFD_COMPATIBLE flag for now, preventing issues with multi-file drivers. Add Mirror VFD to library. * Write-only operations over a network. * Uses TCP/IP sockets. * Server and auxiliary server-shutdown programs provided in a new directory, `utils/mirror_vfd`. * Automated testing via loopback ("remote" of localhost).
* Move intel warnings to subfolder, update autotools filesAllen Byrne2020-05-201-2/+2
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* Flag construction must be after compiler detectionAllen Byrne2020-05-201-0/+1
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* TRILAB-192 add c++ and fortran warnings build systems one fileAllen Byrne2020-05-201-0/+11
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* TRILAB-192 add comparable clang flagsAllen Byrne2020-05-201-0/+4
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* Update the MANIFEST for the autoconf/cmake shared warnings files.David Young2020-05-201-3/+34
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* Add missing MANIFEST entry, ./doc/code-conventions.md .David Young2020-05-201-0/+2
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* HDFFV-11036 add file compare test processAllen Byrne2020-05-201-0/+1
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* Add thread_id.c to the MANIFEST and the CMakeLists.txt per Allen'sDavid Young2020-05-201-0/+1
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* HDFFV-10996 - add java vol testsAllen Byrne2020-05-201-0/+1
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* Updated MANIFESTDana Robinson2020-05-201-0/+1
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* Create common build system files for warningsAllen Byrne2020-05-201-0/+6
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* Squashed commit of the token_refactoring branch:Dana Robinson2020-05-201-2/+6
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* Add test for reference shutdown issueJerome Soumagne2020-05-201-0/+1
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* Add new h5diff filesAllen Byrne2020-05-201-0/+3
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* HDFFV-10980 - h5diff uses new ref APIsAllen Byrne2020-05-201-0/+22
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* Refactor all the 'H5VL_*_optional' callbacks to move the type of operation outQuincey Koziol2020-05-201-0/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | of the va_list, so it's at least possible for another connector to know what the operation is and decide whether to implement it or not. Added a new VOL sub-class called "introspect" where callbacks that report information about the connector or container can be placed. Added an 'opt_query' callback to this sub-class, for a connector to report back to the library whether a particular optional callback operation is supported. Also added a 'get_conn_cls' introspection callback, to retrieve the H5VL_class_t of a connector (either the "current" connector, H5VL_GET_CONN_LVL_CURR, or the terminal connector, H5VL_GET_CONN_LVL_TERM). Moved the "post open" operation from a file 'specific' operation to a file 'optional' operation, now that it's possible to detect (with the 'opt_query' introspection callback) whether a VOL connector implements an optional operation, without just returning an error. Added new internal VOL helper routines: H5VL_object_is_native, to determine if an object is in (or is a) native file, and H5VL_file_is_same, to determine if two objects are in (or are) the same terminal VOL connector's container. (And moved the special handling for FILE_IS_EQUAL operation out of internal VOL callback routine into H5VL_file_is_same) Made new dataset 'get' operation for H5Dvlen_get_buf_size, aligning it better with other 'get' operations in API. Fixed several issues with pass-through connectors, which are now passing the 'make check-passthrough-vol' tests again. A bunch of warning and style cleanups as well.
* TRILABS-135 Add clang analyzersAllen Byrne2020-05-201-0/+7
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* Add missing filenamesAllen Byrne2020-05-201-2/+3
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* Add new test referenceAllen Byrne2020-05-201-0/+2
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* Apparently, + has no special meaning, and neither does \+, in so-calledDavid Young2020-05-201-0/+1
| | | | | | | | "obsolete" / POSIX "basic" regular expressions. Also, not every version of `sed` out there supports the `-E` option. So delete the -E flag and use the regex `[^/][^/]*` instead of `[^/]+`. Add config/netbsd to the MANIFEST.
* Rename log.c to hlog.c, add hlog.[ch] to MANIFEST.David Young2020-02-071-0/+2
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* Merge all of my changes from merge-back-to-feature-vfd_swmr-attempt-1,David Young2019-12-091-50/+217
| | | | | | | | including the merge of `hdffv/hdf5/develop`, back to the branch that Vailin and I share. Now I need to put this branch on a fork with a less confusing name than vchoi_fork!
* Third batch of checkin:Vailin Choi2018-09-281-1/+14
| | | | | | | | | | 1) Free space manager for the metadata file 2) Delayed free space release linked list 3) H5F_update_vfd_swmr_metadata_file() 3) VFD SWMR driver: read callback 4) Flushing for VFD SWMR 5) Port one concurrent test from swmr test set 6) Bug fixes and refactoring
* Develop normalization with vol_integration.Dana Robinson2018-09-191-1/+1
| | | | | Mostly peripheral things like the tools and wrappers, with just enough core library code to support that.
* Update MANIFEST file for new t_coll_md_read.c fileJordan Henderson2018-08-271-0/+1
| | | Remove old line from copyright notice
* Update cmake warnings to match the autotools files betterAllen Byrne2018-08-161-0/+1
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* Add test file with unwritten datasetsAllen Byrne2018-07-241-0/+2
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* Updated for C2Cppfunction_map.htmBinh-Minh Ribler2018-07-231-1/+1
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* Added class DSetAccPropListBinh-Minh Ribler2018-07-221-0/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: - Added class DSetAccPropList for the dataset access property list. - Added wrapper for H5Dget_access_plist to class DataSet // Gets the access property list of this dataset. DSetAccPropList getAccessPlist() const; - Added wrappers for H5Pset_chunk_cache and H5Pget_chunk_cache to class DSetAccPropList // Sets the raw data chunk cache parameters. void setChunkCache(size_t rdcc_nslots, size_t rdcc_nbytes, double rdcc_w0) // Retrieves the raw data chunk cache parameters. void getChunkCache(size_t &rdcc_nslots, size_t &rdcc_nbytes, double &rdcc_w0) - Added two more arguments to H5Location::createDataSet: const DSetAccPropList& dapl = DSetAccPropList::DEFAULT const LinkCreatPropList& lcpl = LinkCreatPropList::DEFAULT - Added one more argument to H5Location::openDataSet: const DSetAccPropList& dapl = DSetAccPropList::DEFAULT Platforms tested: Linux/64 (jelly) Linux/32 (jam) Darwin (osx1010test)
* TRILAB-31 Working locallyAllen Byrne2018-07-161-0/+3
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* Merge pull request #1129 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2018-07-131-0/+8
|\ | | | | | | | | | | | | | | | | | | | | develop * commit '08de02c838c05993fea5febb9c320a679e7f841a': Changes based on feedback from pull request. Fix test_misc33() in test/tmisc.c Open the test file read-only so that it can be accessed for testing. Modifications made based on feedback from pull request. Fix for HDFFV-10333: 1) Check for valid object header version for a refcount messge 2) Check for invalid fill value size 3) Check for invalid dimension size in a layout message 4) Add --enable-error-stack option to h5stat 5) Add error checks to h5stat.c 6) Add tests to h5stat and h5dump Fix daily test failure.
| * Modifications made based on feedback from pull request.Vailin Choi2018-07-111-0/+8
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* | Update Java util lib, Refactor H5D write VL to match readAllen Byrne2018-06-271-3/+3
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* Fixed MANIFESTDana Robinson2018-06-011-2/+3
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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Vailin Choi2018-05-231-4/+36
|\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '2b0fb7e3f1f7da5b23d430702493ed4fb7f87166': (21 commits) HDFFV-9739 only executes H5E tests in production Remove link flag from compile command fix typo Add release note Correct attribute location HDFFV-9739 fix copy testfiles command HDFFV-9739 remove obsolete test files HDFFV-9739 dup test file for concurrent tests HDFFV-9739 Fix autotools script HDFFV-9739 Change autotools test scripts Fix typo HDFFV-9739 Update test reference Update current windows test machines HDFFV-9739 Grab err number before API call HDFFV-9739 Add release note Adjust test names for concurrent tests Fix soversion HDFFV-9739 Fix copy name HDFFV-9739 factor out tests into separate JUnit Updated the threadsafety test to use error macros instead of asserts. ...
| * HDFFV-9739 remove obsolete test filesAllen Byrne2018-05-211-4/+0
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| * HDFFV-9739 factor out tests into separate JUnitAllen Byrne2018-05-151-0/+36
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* | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Vailin Choi2018-05-141-0/+2
|\ \ | |/ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'dcc66a4f157ace0858b788228550f3e104df3242': (35 commits) GGC requires attribute before function Correct COMPILE defs usage Add missing module_dir property Text cleanup Correct sentence punctuation. Add release note. Use set_property for MT flag Correct command usage Remove APPEND Fix typo Add missing test lib add missing folder to path Fix another command revert Missed a command revert Revert to old style for LINK_FLAGS gen expr not working LINK_FLAGS must be separate property sets Fix link flags syntax Revert refactor link flags refactor link flags to interface Refactor link flags ...
| * TRILABS-20 Fix fortran configure during fix of CXX configureAllen Byrne2018-04-241-0/+2
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* | Fix for HDFFV-10180 Performance issues with H5Oget_info.Vailin Choi2018-04-241-0/+1
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* Add missing fileAllen Byrne2018-04-121-0/+1
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* Fix Java test for DEBUG_APISAllen Byrne2018-04-091-0/+2
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* Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Quincey Koziol2018-03-181-14/+39
|\ | | | | | | | | | | merge_func_enter_vol Plus initial steps toward merging API context push into FUNC_ENTER_API* macros
| * Merge pull request #931 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2018-03-121-0/+23
| |\ | | | | | | | | | | | | | | | | | | | | | develop * commit 'f08b8fa10e7bac5ae26e3b06f938d38ebb3f28e1': Enhancement to the tool h5clear (HDFFV-10360) Fix for HDFFV-10209 VDS SWMR test failure Free the object header when there are chksum retries.
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