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* [svn-r29748] HDFFV-9770: Fix h5watch and CMake for HL.Allen Byrne2016-04-191-0/+2
| | | | Convert CMake sources tags from _SRCS to _SOURCES(closer match to Makefile).
* [svn-r29733] HDFFV-9756: Verified H5Dint.c patch works for H5Repack, also ↵Allen Byrne2016-04-181-10/+8
| | | | | | | | | reworked VDS tests for H5Repack. HDFFV-9766: Added h5format_convert to CMake. Reworked tests to allow parallel testing with CMake. HDFFV-9770: Added h5watch to CMake. Tested: CMake and autotools on loacl linux.
* [svn-r29694] HDFFV-9756,9766,9719:Allen Byrne2016-04-141-0/+10
| | | | | | 9756-fix h5diff VDS 9766-fix h5repack VDS 9719 - reconcile tools differences
* [svn-r29566] Merge from revise_chunks java changes in rev 29562, 29556, ↵Allen Byrne2016-03-241-1/+1
| | | | 29561, and add flush/refresh functions
* [svn-r29456] Removed BRANCH.txtDana Robinson2016-03-161-1/+0
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* [svn-r29452] Correct signature of H5Pexist to return boolean and fix test ↵Allen Byrne2016-03-161-0/+1
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* [svn-r29412] HDFFV-9717: add overview section to javadocsAllen Byrne2016-03-141-0/+1
| | | | Add Java and update options to CMake/Windows docs
* [svn-r29389] Maintenance: Added history file that contains development info ↵Elena Pourmal2016-03-101-1/+1
| | | | from 1.8.0 to 1.10.0 and removed the empty 1.9 file; updated MANIFEST accordingly.
* [svn-r29385] Updated MANIFEST to include Java Makefile.in files.Dana Robinson2016-03-101-0/+9
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* [svn-r29371] HDFFV-9624: SWMR apis addedAllen Byrne2016-03-091-0/+3
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* [svn-r29291] Merge of r29226-29259 from trunk.Dana Robinson2016-03-061-2/+318
| | | | | | | Mostly java JNI + a few smaller merges. Tested on: h5committest.new jam w/ java
* [svn-r29289] Merge of r29222, 29261, 29270, 29272, 29274, 29275 from trunkDana Robinson2016-03-061-0/+7
| | | | | | | tools patches Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1 autotools serial
* [svn-r29287] Merge of r29269, 29270, 29272 from trunk.Dana Robinson2016-03-061-0/+1
| | | | | | | packet table improvements Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1 autotools serial w/ Fortran and C++
* [svn-r29219] Merge of r29062, 29074, 29092Dana Robinson2016-02-271-0/+1
| | | | | | | | Fortran VDS wrappers and bugfixes. Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1 autotools serial w/ Fortran autotools parallel w/ Fortran
* [svn-r29206] Merge h5dump VDS support from trunk:Dana Robinson2016-02-251-0/+13
| | | | | | | | | r29186, r29190, r29198 Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 autotools serial cmakehdf5 (CMake 3.2.2) chkmanifest
* [svn-r29205] Merge from trunk:Dana Robinson2016-02-251-3/+0
| | | | | | | r28635, 28902, 29030, 29034, 29035, 29119, 29132, 29158 Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 autotools serial (debug w/ C++ & Fortran)
* [svn-r29064] Update MANIFEST due to checkin #29048 to revise_chunks.Vailin Choi2016-02-081-2/+30
| | | | Tested on jam, moohan, osx1010test.
* [svn-r29016] Merge of r28936, 28949, 28960-29009 from trunk.Dana Robinson2016-01-291-0/+1
| | | | | | | Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 autotools serial w/ Fortran and C++ autotools parallel (MPICH 3.1.4) w/ Fortran CMake serial (3.3.2, via cmakehdf5)
* [svn-r28931] Merge of r28905, 28906 from trunk (C++ array bugfix).Dana Robinson2016-01-201-0/+1
| | | | | Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 autotools serial, C++ only
* [svn-r28889] Merge of r28865, 28866, 28868, 28885 from trunk (h5dump bugfix).Dana Robinson2016-01-131-0/+2
| | | | | Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 autotools serial
* [svn-r28880] Added a shell script to flip maintainer mode in configure.ac. ↵Dana Robinson2016-01-131-0/+1
| | | | | | | | This can be called by other shell scripts when we create release branches. Tested on: linux VM
* [svn-r28582] Removed unused CMake file (align with trunk).Dana Robinson2015-12-111-1/+0
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* [svn-r28379] HDFFV-9573: Our helper tests bin/release and bin/h5vers are not ↵Albert Cheng2015-11-171-0/+70
| | | | | | | | | | working properly bin/release uses the content of MANIFEST file to build the release tarball. But all the files generated by autogen had been removed. Therefore the release would not contain those needed generated files for a proper release. Solution: Added all those generated files to the tail of MANIFEST and titled it accordingly. (Somehow bin/chkmanifest does not complain against these entries though they are not svn managed. This needs further investigation.) Test: bin/release generated the release tarball in jam, then use it in Platypus to do a full build (--enable-fortran --enable-cxx). Build completed but some tests failed but that is likely a code problem than a release files problem.
* [svn-r28374] Added a script to automate the initial VDS + SWMR test.Dana Robinson2015-11-171-0/+1
| | | | | Tested on Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only
* [svn-r28362] Merge of r28234 to r28346 from the trunk.Dana Robinson2015-11-161-0/+4
| | | | | | | | This includes the flex/bison changes to both the autotools and CMake. Tested on Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial and parallel (MPICH 3.1.4)
* [svn-r28330] Implementation for version 3 superblock and latest version support.Vailin Choi2015-11-131-4/+4
| | | | Tested on quail, kite, osx1010test, platypus, ostrich, moohan, emu, jam.
* [svn-r28232] Updated MANIFESTDana Robinson2015-10-261-0/+1
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* [svn-r28216] Merge of r27969:28132, 28144:28193 from trunk.Dana Robinson2015-10-261-2/+2
| | | | | | | | | | | | Mostly CMake changes, but there's also a few minor library changes. Temporarily commented out the accum test. The test builds but one of the sub-tests fails due to a file issue. Tested on: Ubuntu 15.04 (Linux 3.19 x86_64) gcc 4.9.2 serial w/autotools serial w/CMake (3.3.2, w/ fortran and C++)
* [svn-r28206] 1) Implementation for Single Chunk indexing type.Vailin Choi2015-10-231-0/+1
| | | | 2) Fix for changing h5format_convert testfiles for in-place build.
* [svn-r28164] Added VDS SWMR test generator and writer files. These test filesDana Robinson2015-10-211-0/+4
| | | | | | | are executed manually for now. Tested on: Ubuntu 15.04 (Linux 3.19 x86_64) gcc 4.9.2 serial only
* [svn-r28099] Description:Quincey Koziol2015-10-161-1/+75
| | | | | | | | Bring r27958 from trunk to branch. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest not required on this branch)
* [svn-r28093] Merge of r27768 and r27774 from trunkDana Robinson2015-10-161-0/+31
| | | | | | | | | | | | | | | | | | | | | Description: Complete revamp of package initialization/shutdown mechanism in the library. Each package now has a single init/term routine. This new way should avoid packages being re-initialized during library shutdown and is also be _much_ more proactive about giving feedback for resource leaks internal to the library. Introduces a new "module" header file for packages in the library (e.g src/H5Fmodule.h) which sets up some necessary package configuration macros for the FUNC_ENTER/LEAVE macros. (The VFL drivers have their own slightly modified version of this header, src/H5FDdrvr_module.h) Also cleaned up a bunch of resources leaks all across the library and tests, along with addressing many warnings, as I encountered them. Tested on: Ubuntu 15.04 (Linux 3.19 x86_64) gcc 4.9.2 serial and parallel (MPICH 3.1.4)
* [svn-r28092] Description:Quincey Koziol2015-10-161-1/+0
| | | | | | | | Merge the storage message back into the layout message. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest not required on this branch)
* [svn-r28037] Description:Quincey Koziol2015-10-121-25/+97
| | | | | | | | Bring r27806 from trunk to branch. Also, some minor code cleanups. Tested on: MacOSX/64 10.10.5 (amazon) w/serial (h5committest not required on this branch)
* [svn-r27980] Merge of r27969 and 27974 from trunk.Dana Robinson2015-10-071-3/+3
| | | | | | Removes _DO_NOT_DISTRIBUTE_ from a few files. Tested on: bin/chkmanifest
* [svn-r27979] Merge of r27961, 27962, and 27966 from trunk.Dana Robinson2015-10-071-0/+2
| | | | | | | C++ changes to address HDFFV-9169 and HDFFV-9167. Tested on: Ubuntu 15.04 (Linux 3.19 x86_64) gcc 4.9.2 (serial only)
* [svn-r27960] Autogen merges from trunk.Dana Robinson2015-10-061-82/+14
| | | | | | | r27794, 27795, 27802, 27812, 27819, 27826, 27828, 27829, 27878 27880, 27898, 27902 Tested on: local Linux
* [svn-r27954] Merge of smaller changes from the trunk:Dana Robinson2015-10-051-1/+1
| | | | | | | | r27807, 27810, 27834, 27847, 27854, 27892, 27938 Tested on: Ubuntu 15.04 (Linux 3.19 x86_64), gcc 4.9.2, MPICH 3.1.4 parallel w/ fortran serial w/ fortran and C++
* [svn-r27953] Merge of CMake files from the trunk.Dana Robinson2015-10-051-0/+1
| | | | | | | r27796, 27803, 27808, 27817, 27823, 27831, 27836, 27846, 27858-27874, 27894-27897, 27901, 27903-27933 Not tested. CMake still basically broken in this branch.
* [svn-r27859] Merged revisionsDana Robinson2015-09-221-30/+30
| | | | | | | | | | | 27625, 27627, 27647, 27648, 27661, 27668, 27670, 27671, 27674, 27676, 27703, 27716, 27720, 27747, 27754, 27755 from the trunk. Mostly CMake and Fortran changes. Tested on: jam (w/ gcc/gfortran 4.9.3)
* [svn-r27857] Merged revisions 27612-4, 27618, 27663, 27682, 27728 from the ↵Dana Robinson2015-09-221-1/+0
| | | | | | trunk. Tested on: jam (w/ gcc/gfortran 4.9.3)
* [svn-r27855] Merged revisions:Dana Robinson2015-09-221-0/+1
| | | | | | | | | | | 27509, 27515, 27517, 27521, 27524, 27525, 27537, 27555, 27570, 27575, 27585, 27586, 27590, 27591, 27592 from the trunk. Minor CMake and Fortran changes Tested on: jam (w/ gcc/gfortran 4.9.3)
* [svn-r27853] Merged r27488-27500 from the trunk.Dana Robinson2015-09-221-140/+33
| | | | | | | Fortran 2003 changes Tested on: jam serial (w/ gcc/gfortran 4.9.3) jam parallel (fortran tests, parallel tests have known failure)
* [svn-r27841] Merged r27346, r27407, r27459, r27460, r27467, r27468, r27485 ↵Dana Robinson2015-09-211-1/+1
| | | | | | | | from trunk. These are all CMake-only or comment/whitespace changes. Tested on: N/A CMake still fails in this branch.
* [svn-r27821] Bring revisions #27262 - 27294 from trunk to revise_chunks.Vailin Choi2015-09-181-0/+2
| | | | Tested on jam, ostrich, platypus, osx1010test, emu.
* [svn-r27765] Merges from trunk:Dana Robinson2015-09-121-1/+0
| | | | | | | | | | | | | | | | - VMS code removal: 27572 - Dataspace memory error: 27605 - Extraneous dataset flush: 27615 - Warning quieting: 27623 - Hyperslab error clarity: 27631 - Duplicate attribute macros: 27753 Tested on: koala w/ C++ and Fortran
* [svn-r27763] Merges from trunk:Dana Robinson2015-09-121-4/+3
| | | | | | | | | | | | | | | | | | | | | | | | | | - tools: 27238, 27252, 27267, 27656 - inline markup: 27278 - bin/bbrelease: 27280, 27283, 27624 - h5vers: 27475 - C++ Doxygen: 27494-6 - FUNC_ENTER macro bug: 27581 - H5is_library_threadsafe: 27587, 27601 - release_docs: 27597 - Autotools freshening: 27641, 27653, 27675, 27686, 27692, 27699, 27722 27731, 27734, 27752 - MANIFEST comments: 27642 Tested on: ostrich & koala various combinations of --enable-threadsafe
* [svn-r27761] Fix the bug uncovered by daily test failure: configure ↵Vailin Choi2015-09-111-1/+0
| | | | | | --with-default-api-version=v16. Tested on jam and moohan.
* [svn-r27758] Implementation for "h5format_convert" tool to convert a chunked ↵Vailin Choi2015-09-111-0/+25
| | | | | | dataset's indexing type to v1 B-tree indexing type. Code review pending.
* [svn-r27571] - h5watch tests are now skipped when the test VFD does not ↵Dana Robinson2015-08-241-0/+1
| | | | | | | | support SWMR. - General improvements to the h5watch Makefile.am. Tested on: jam w/ HDF5_DRIVER=stdio and sec2
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