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* [svn-r9402] Purpose:Quincey Koziol2004-10-121-0/+4
| | | | | | | | | | | | | | | | | Port development branch changes to release branch. Description: Initial step in bringing changes to support new metadata cache from the development branch to the release branch. Solution: This checkin just aligns the H5AC* API changes, as well as bringing back various minor code cleanups, etc. Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel Solaris 2.7 (arabica) Linux 2.4 (verbena) w/FORTRAN
* [svn-r9386] Purpose:Quincey Koziol2004-10-091-0/+6
| | | | | | | | | | | | | | | | | | | | | | | Refactor and update fortran configuration Description: Changed configure.in to include the production, debugging and profiling flags for FORTRAN in the command line. Added '-flags' files for PGI and Intel C compilers Added '-fflags' files for PGI and Intel FORTRAN compilers Updated 'gnu-flags' file for GNU C compiler to not modify compiler flags when gcc is not being used. Make detection of the correct FORTRAN compiler a bit smarter for Linux platforms. (And carried over some of the minor changes to other affected machines) Platforms tested: Linux 2.4 (tungsten) w/PGI and Intel C & FORTRAN compilers. Changes not tested by h5committest
* [svn-r9383] Purpose:Robert E. McGrath2004-10-081-0/+18
| | | | | | | | | | | | | | Putting 'h5jam' in the 1.6 branch Description: Solution: Platforms tested: verbena, arabica, cobalt Misc. update:
* [svn-r9374] Purpose:Quincey Koziol2004-10-061-0/+1
| | | | Update manifest with new file.
* [svn-r9356] Purpose:Quincey Koziol2004-10-011-0/+2
| | | | | | | | | | | | | | | | Bug fix & code cleanup Description: More dataset cleanups to get to a point where we can fix the chunked I/O bug. Also fix a couple of errors in the recent file object resurrection changes which should hopefully address the recent daily test failres (H5T.c) Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel Solaris 2.7 (arabica) h5committest
* [svn-r9345] Purpose:Quincey Koziol2004-09-301-1/+0
| | | | Update manifest list.
* [svn-r9292] Purpose: MaintenanceElena Pourmal2004-09-211-2/+0
| | | | | | | | | | | | Description: Removed entries for INSTALL_Windows_withF90.txt INSTALL_Windows_withcpp.txt since files were deleted from CVS. Solution: Platforms tested: arabica with bin/chkmanifest Misc. update:
* [svn-r9248] Purpose:Quincey Koziol2004-09-141-0/+3
| | | | Update manifest with new files for C++ reference manual directory.
* [svn-r9238] Description:Frank Baker2004-09-091-0/+2
| | | | Add Dependencies and Makefile.in in hdf5/doc/html/cpplus_RM/.`
* [svn-r9170] Purpose:MuQun Yang2004-08-271-1/+1
| | | | | | | | | | | | | | | Re-order the addition of two windows install docs to MANIFEST. Description: MANIFEST has been updated when two new windows installed files are checked in. However, daily tests show check of MANIFEST failed. It seems that the order of the file makes difference. Change the order of the two install files in the MANIFEST. See whether it will fail again. Solution: Platforms tested: Misc. update:
* [svn-r9167] Purpose:Xuan Bai2004-08-261-0/+2
| | | | | | | | | | | | Add two new document files for windows support. Description: Solution: Platforms tested: Misc. update:
* [svn-r9136] Purpose:Pedro Vicente Nunes2004-08-231-0/+1
| | | | | | | | | | | | | | | | | | new test for h5repack Description: added a test that generates and copies a file with a dataset with fill value (this is to test the property list function H5Pequal) Solution: Platforms tested: linux solaris aix Misc. update:
* [svn-r9093] Purpose: Removing unused filesBinh-Minh Ribler2004-08-161-3/+1
| | | | | | | | | Description Removed these lines because the files were there by mistake: ./doc/html/cpplus_RM/page1.html ./doc/html/cpplus_RM/pages.html Misc. update:
* [svn-r9092] Purpose: Adding files for C++ API RMBinh-Minh Ribler2004-08-161-0/+5
| | | | | | | | | | | | | Description: Added these lines ./c++/src/config_cpp_doc ./c++/src/h5c++.in ./c++/src/header.html ./c++/src/header_files/filelist.xml ./c++/src/header_files/image001.jpg ./c++/src/header_files/image002.jpg Misc. update:
* [svn-r9061] Purpose:MuQun Yang2004-08-111-1/+0
| | | | | | | | | | | | | remove the line with all_withf90.zip. Description: all_withf90.zip is no longer needed due to merging of fortran projects to all.zip Solution: Platforms tested: Misc. update:
* [svn-r9044] Frank Baker2004-08-071-2/+0
| | | | | | Purpose: Removing 2 extraneous lines from the "C++ Ref Manual" section. (Corrects an error introduced yesteday.)
* [svn-r9029] Frank Baker2004-08-051-0/+230
| | | | | Purpose: Adding the files for the C++ Reference Manual.
* [svn-r8989] Purpose:Quincey Koziol2004-08-021-54/+54
| | | | | | | | | | | | | | Backport feature Description: Backport Kent's collective chunk I/O work to date into the release branch. Also, minor code cleanups, etc. Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel IRIX64 6.5 (modi4) h5committested
* [svn-r8986] Purpose:Quincey Koziol2004-08-021-0/+2
| | | | | | | Update manifest Description: Add a couple of missing files.
* [svn-r8985] Purpose:Quincey Koziol2004-08-021-7/+0
| | | | | | | | | | | | | | | | | | | | | Bug fixes & code cleanups Description: Backport MPI-I/O changes from the development branch to the release branch in preparation for bringing Kent's collective chunk I/O changes back. Removed last vestiges of FPHDF5 from this branch, as it was never working here. Various code cleanups & syncrontizations to better align with development branch code and reduce diffs. Regenerate dependencies. Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel IRIX64 6.5 (modi4) h5committested
* [svn-r8978] Purpose: Update MANIFESTBinh-Minh Ribler2004-08-011-0/+4
| | | | | | | | | Description: Added these lines ./c++/src/H5ArrayType.cpp ./c++/src/H5ArrayType.h ./c++/src/H5VarLenType.cpp ./c++/src/H5VarLenType.h
* [svn-r8952] Purpose: Adding fileBinh-Minh Ribler2004-07-261-0/+1
| | | | | Description Added file c++/src/H5CppDoc.h.
* [svn-r8903] Purpose:Pedro Vicente Nunes2004-07-201-18/+10
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | h5diff and h5repack changes Description: h5diff introduced the following four modes of output: Normal mode: print the number of differences found and where they occured Report mode: print the above plus the differences Verbose mode: print the above plus a list of objects and warnings Quiet mode: do not print output (h5diff always returns an exit code of 1 when differences are found) h5repack added an extra parameter for SZIP filter (coding method) the new syntax is -f SZIP=<pixels per block,coding> (pixels per block is a even number in 2-32 and coding method is 'EC' or 'NN') Example of use: ./h5repack -i file1 -o file2 -f SZIP=8,NN -v updated usage messages, test scripts and files accordingly Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8876] James Laird2004-07-141-0/+2
| | | | | | | | | | | | | | | | | | | | | | Purpose: Bug Fix Description: If an HDF5 file grows larger than its address space, it dies and is unable to write any data. This is more likely to happen since users are able to change the number of bytes used to store addresses in the file. Solution: HDF5 now throws an error instead of dying. In addition, it "reserves" address space for the local heap and for object headers (which do not allocate space immediately). This ensures that after the error occurs, there is enough address space left to flush the entire file to disk, so no data is lost. A more complete explanation is at /doc/html/TechNotes/ReservedFileSpace.html Platforms tested: sleipnir, copper (parallel), verbena, arabica, Windows (Visual Studio 7) Misc. update:
* [svn-r8864] Purpose:Pedro Vicente Nunes2004-07-131-0/+1
| | | | | | | | | | | | new file for the h5repack tests Description: Solution: Platforms tested: Misc. update:
* [svn-r8863] Purpose:Pedro Vicente Nunes2004-07-131-2/+6
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | h5repack changes Description: there were some requests to change some minor h5repack features h5repack only made a warning about a non available filter in verbose mode ( -v ) without -v it kept silent, and users sometimes missed this warning the request was that it should print this warning always. so, the new format, is e.g ./h5repack -i test_szip.h5 -o out.h5 Warning: dataset </dset_szip> cannot be read, SZIP filter is not available due to this, and to avoid a lot of these messages in the shell test script, I modified the script h5repack.sh so that it detects the presence of all filters in the environment (previously it only detected SZIP) the test files were also divided in more files , to make the script code easier to follow Solution: Platforms tested: linux AIX (without SZIP) solaris (without gzip and SZIP) Misc. update:
* [svn-r8851] Purpose:Pedro Vicente Nunes2004-07-091-1/+1
| | | | | | | | | | | | | h5dump new tests Description: added new tests for the print of array indices (nested objects, several ranks) Solution: Platforms tested: Misc. update:
* [svn-r8846] Purpose:Quincey Koziol2004-07-091-0/+2
| | | | | | | | | | | | | | | | | | Bug fix Description: The "shared" raw B-tree node can get freed before all the B-tree nodes had been flushed out to disk and released by the cache. Solution: Implement a simple reference counting wrapper for objects in the library and use it to hold the shared raw B-tree nodes so they aren't freed before all references to them in memory are released. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) IRIX64 6.5 (modei4)
* [svn-r8830] Purpose: Remove filesBinh-Minh Ribler2004-07-081-6/+0
| | | | | | | | Description: Removed c++/examples/*.h5 Platforms tested: Not necessary
* [svn-r8825] Purpose:Pedro Vicente Nunes2004-07-071-3/+2
| | | | | | | | | | | | | | h5dump new tests Description: added more tests for the escape/not escape feature for string data (with vlen, with compound, with char data) Solution: Platforms tested: Misc. update:
* [svn-r8810] Purpose:Pedro Vicente Nunes2004-07-061-8/+9
| | | | | | | | | | | | | | | | h5dump new tests Description: added new tests for the -p option, superblock, file contents, fill values, array indices. Solution: Platforms tested: linux AIX solaris Misc. update:
* [svn-r8770] Raymond Lu2004-06-301-0/+1
| | | | | | | | | | | Purpose: New feature and its test Description: Added API H5Fget_name. It returns the name of file by object ID(file, group, dataset, named datatype, attribute) which belongs to the file. filename.c tests this function. Platforms tested: h5committest Misc. update: MANIFEST, RELEASE.txt
* [svn-r8757] Nat Furrer2004-06-291-0/+1
| | | | | | | | | | | | | Purpose: Added an HDF5 file for testing purposes. Description: Solution: Platforms tested: Misc. update:
* [svn-r8753] Nat Furrer2004-06-281-1/+1
| | | | | | | | | | | | | | | | | | | Purpose: Handled SZIP without the encoder present. Description: It is now an error for a user to try to create, extend, or write to a dataset without the encoder present in their SZIP library. Added H5Zget_filter_info to provide users with a way to query HDF5 about the presence (or lack thereof) of the SZIP encoder. Platforms tested: Windows Verbena Arabica Copper Misc. update:
* [svn-r8717] Purpose:Pedro Vicente Nunes2004-06-221-0/+10
| | | | | | | | | | | | | | | | | | | | | h5dump new features Description: the storage layout output format had some changes same for the user defined filter add an option (-y) for not printing the array indices (default is print indices ) the option for escaping non printable characters covers all characters (default is not escape) add tests for the new options Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8643] Purpose:Pedro Vicente Nunes2004-06-101-0/+21
| | | | | | | | | | | | | | | | | | | | | | | | | | | h5dump new features Description: added the code for print strings with new line and display the path of references (new source files h5tools_ref.c and .h ) added a test suite in testh5dump.sh.in for ( note : to create testh5dump.sh , one must redo ./configure; this detects the availability of filters and generates testh5dump.sh accordingly) 1) storage layout 2) fill value 3) print reference with path 4) print strings with new lines 5) filters Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8629] Purpose:Quincey Koziol2004-06-091-1/+1
| | | | | | | | | | | | Update shell scripts Description: Switch to generating the testh5dump.sh script at configure time, so we can determine which filters are available to test. Platforms tested: FreeBSD 4.9 (sleipnir) too small to require h5committest
* [svn-r8619] Purpose:Quincey Koziol2004-06-051-4/+4
| | | | Fix makefiles, dependencies & manifest after source file rename.
* [svn-r8592] Purpose:Quincey Koziol2004-05-271-0/+3
| | | | | | | | | | | | | | | | | | | | | Code optimization & bug fix Description: When dimension information is being stored in the storage layout message on disk, it is stored as 32-bit quantities, possibly truncating the dimension information, if a dimension is greater than 32-bits in size. Solution: Fix the storage layout message problem by revising file format to not store dimension information, since it is already available in the dataspace. Also revise the storage layout data structures to be more compartmentalized for the information for contiguous, chunked and compact storage. Platforms tested: FreeBSD 4.9 (sleipnir) w/parallel Solaris 2.7 (arabica) h5committest
* [svn-r8583] Purpose:Pedro Vicente Nunes2004-05-261-0/+3
| | | | | | | | | | | | | | | added 2 new tests (boot block and file contents) Description: Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8399] Purpose:Quincey Koziol2004-04-201-0/+1
| | | | | Update depenvy files after h5repack import & add dependency file to h5repack directory.
* [svn-r8398] Purpose:Pedro Vicente Nunes2004-04-201-0/+1
| | | | | | | | | | Description: Solution: Platforms tested: Misc. update:
* [svn-r8397] Purpose:Pedro Vicente Nunes2004-04-201-5/+45
| | | | | | | | | | | | | | | | | | | | h5repack in 1.6 Description: 2 functions we re added to /src: H5Premove filter and H5Iget_file_id Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8382] Purpose:Quincey Koziol2004-04-181-1/+1
| | | | Fix typo in file name.
* [svn-r8379] Purpose:Quincey Koziol2004-04-171-0/+2
| | | | | | | | | | | | Added new files Description: Solution: Platforms tested: Misc. update:
* [svn-r8300] Purpose:Albert Cheng2004-04-051-1/+0
| | | | | | | | | | | | | | Cleanup Description: Removed FPHDF configure and test file since it is not implemented in v1.6. Platforms tested: Only tested in Sol parallel. Misc. update: Update MANIFEST.
* [svn-r8250] Purpose:Pedro Vicente Nunes2004-03-101-0/+3
| | | | | | | | | | | | added 2 files to list Description: Solution: Platforms tested: Misc. update:
* [svn-r8215] Purpose:Quincey Koziol2004-02-221-0/+1
| | | | Add c++/config/freebsd file
* [svn-r8064] Elena Pourmal2004-01-141-1/+2
| | | | | | | | | | | | | | | Purpose: Maintenance Description: I added new configuration file ia64-linux-gnu to the c++/config directory and made ecc a default C++ compiler for ia64-linux-gnu systems Solution: N/A Platforms tested: Altix (SGI Linux64 IA64 machine) - all tests passed titan - configuration passed; it is still building Misc. update:
* [svn-r8030] Elena Pourmal2004-01-061-1/+3
| | | | | | | | | | | | | | | | | | | | Purpose: Maintenance Description: Added Fortran support for MAC OS X Solution: This port was tested only for IBM XL Fortran compiler version 8.1 Beta. Few things to remember: 1. do not use AFS to build Fortran; compiler for some reason cannot find *.mod files that were successfully compiled. 2. Fortran Library can be built only with --disable-shared --enable-static flags. Platforms tested: pommier, h5committested (it is amasing, but iot works really nicely! Albert, Thank you!) Misc. update:
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