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* [svn-r8852] Purpose:Pedro Vicente Nunes2004-07-091-3/+1
| | | | | | | | | | | | | | | | h5dump new tests Description: added new tests for the print of array indices (nested objects, several ranks) Solution: Platforms tested: linux AIX solaris Misc. update:
* [svn-r8844] Purpose:Quincey Koziol2004-07-091-0/+2
| | | | | | | | | | | | | | | | | | Bug fix Description: The "shared" raw B-tree node can get freed before all the B-tree nodes had been flushed out to disk and released by the cache. Solution: Implement a simple reference counting wrapper for objects in the library and use it to hold the shared raw B-tree nodes so they aren't freed before all references to them in memory are released. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) IRIX64 6.5 (modei4)
* [svn-r8826] Purpose:Pedro Vicente Nunes2004-07-071-0/+2
| | | | | | | | | | | | | | | | | | h5dump new tests Description: added more tests for the escape/not escape feature for string data (with vlen, with compound, with char data) Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8821] Purpose: Remove filesBinh-Minh Ribler2004-07-071-6/+0
| | | | | | | | | | Description: Removed c++/examples/*.h5 Platforms tested: Not necessary Misc. update:
* [svn-r8812] Purpose:Pedro Vicente Nunes2004-07-061-7/+10
| | | | | | | | | | | | | | | | | | h5dump new tests Description: added new tests for the -p option, superblock, file contents, fill values, array indices. Solution: Platforms tested: linux AIX solaris Misc. update:
* [svn-r8791] Purpose: Rewrote metadata cache (H5AC.c, etc.) to improve ↵John Mainzer2004-07-021-0/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | performance. Description: Replaced the old metadata cache with a cache with a modified LRU replacement policy. This should improve the hit rate. Solution: Since we want to flush cache entries in increasing address order, I used the threaded binary B-tree code to store the cache entries. There is a fair bit of overhead here, so we may want to consider other options. While the code is designed to allow the support of other replacement algorithms, at present, only a modified version of LRU is supported. The modified LRU algorithm requires that a user selectable portion of the cache entries be clean. The clean entries are evicted first when writes are not permitted. If the pool of clean entries is used up, the cache grows beyond its user specified maximum size. The cache can also exceed its maximum size if the combined size of the protected (or locked) entries exceeds the maximum size of the cache. Platforms tested: eirene (serial, parallel, fp), h5committested Misc. update:
* [svn-r8781] James Laird2004-07-011-1/+3
| | | | | | | | | | | | | | | | Purpose: HDF5 now supports SZIP with no encoder. Description: SZIP can be configured to have both encoder and decoder or just to have the decoder. HDF5 can now query the configuration of any filter, and will throw errors if users try to write using a filter with encoding disabled. Solution: Added H5Zget_filter_info function, changed API for H5Pget_filter and H5P_get_filter_by_id. See SZIP RFC. Platforms tested: Copper (fortran, C++, parallel), Sleipnir (C++), Arabica (fortran, C++), Verbena (fortran, C++) Misc. update:
* [svn-r8765] Purpose: New feature and its test.Raymond Lu2004-06-301-0/+1
| | | | | | | | | | | Description: Added new API H5Fget_name and new test program called filename.c. This function returns the name of the file by object ID(file, group, dataset, named datatype, and attribute) which belongs to the file. Platforms tested: h5committest and fuss. Misc. update: MANIFEST and RELEASE.txt
* [svn-r8715] Purpose:Pedro Vicente Nunes2004-06-221-0/+7
| | | | | | | | | | | | | | | | | | | | | | h5dump output change, new tests Description: the storage layout output format the storage layout output format had some changes same for the user defined filter add an option (-y) for not printing the array indices (default is print indices ) the option for escaping non printable characters covers all characters (default is not escape) (this might be not very portable, the test files are tstring.ddl and tstringe.ddl ) add tests for the new options Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8713] Purpose: Bug fix.Raymond Lu2004-06-211-0/+2
| | | | | | | | | | | | | | | Description: This is the second effort to correct XML dumper after adding null dataspace test for attribute and dataset. Since XML schema hasn't been updated for null space, took out null space test from tdset.h5 and tattr.h5 and put it into a seperate file, tnullspace.h5. Only h5dump tests this null space file; XML dumper doesn't do it at this moment. We'll wait until XML schema is updated first. Platforms tested: h5committest and RH 8(fuss) Misc. update: MANIFEST(added two new files in tools/testfiles, tnullspace.h5 and tnullspace.ddl)
* [svn-r8711] Fixed bugs in H5I code, updated manifest.James Laird2004-06-211-0/+1
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* [svn-r8644] Purpose: h5dump new featuresPedro Vicente Nunes2004-06-101-0/+17
| | | | | | | | | | | | | | | | | | | | | | | Description: added the code for print strings with new line and display the path of references (new source files h5tools_ref.c and .h ) added a test suite in testh5dump.sh.in for ( note : to create testh5dump.sh , one must redo ./configure; this detects the availability of filters and generates testh5dump.sh accordingly) 1) storage layout 2) fill value 3) print reference with path 4) print strings with new lines 5) filters Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8627] Purpose:Quincey Koziol2004-06-091-1/+1
| | | | | | | | | | | | Update shell scripts Description: Switch to generating the testh5dump.sh script at configure time, so we can determine which filters are available to test. Platforms tested: FreeBSD 4.9 (sleipnir) too small to require h5committest
* [svn-r8622] Purpose:Pedro Vicente Nunes2004-06-071-0/+4
| | | | | | | | | | | | | | | | | | | | | | | | | h5dump new version Description: added the changes already made for 1.6 support for dumping of 1) filters 2) storage layout 3) fill value 4) comments 5) superblock 6) file contents 7) array indices Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8618] Purpose:Quincey Koziol2004-06-051-4/+4
| | | | Fix makefiles, dependencies & manifest after source file rename.
* [svn-r8603] Purpose:Quincey Koziol2004-06-021-3/+0
| | | | Remove the C++ files that were removed from the repo.
* [svn-r8590] Purpose:Quincey Koziol2004-05-271-0/+3
| | | | | | | | | | | | | | | | | | | | | Code optimization & bug fix Description: When dimension information is being stored in the storage layout message on disk, it is stored as 32-bit quantities, possibly truncating the dimension information, if a dimension is greater than 32-bits in size. Solution: Fix the storage layout message problem by revising file format to not store dimension information, since it is already available in the dataspace. Also revise the storage layout data structures to be more compartmentalized for the information for contiguous, chunked and compact storage. Platforms tested: FreeBSD 4.9 (sleipnir) w/parallel Solaris 2.7 (arabica) h5committest
* [svn-r8589] Purpose: bug fixRaymond Lu2004-05-271-0/+1
| | | | Misc. update: update MANIFEST for adding h5diff_81.txt
* [svn-r8536] Purpose: Update MANIFESTBinh-Minh Ribler2004-05-181-0/+4
| | | | | | | | | Description: Added these lines ./c++/src/H5ArrayType.cpp ./c++/src/H5ArrayType.h ./c++/src/H5VarLenType.cpp ./c++/src/H5VarLenType.h
* [svn-r8479] Purpose:Albert Cheng2004-05-031-2/+2
| | | | | | | | | | | | | New Feature Description: Add the data transform function, H5Pset_transform(). Platforms tested: "h5committested". Copper was down. Ran parallel tests in sol instead. Misc. update:
* [svn-r8320] Purpose:Pedro Vicente Nunes2004-04-081-0/+2
| | | | | | | | | | | | | | | | new tests for h5repack Description: added more tests both to the test program and shell script that test a variation of different filter converssions Solution: Platforms tested: linux Misc. update:
* [svn-r8318] Purpose:Pedro Vicente Nunes2004-04-071-0/+4
| | | | | | | | | | | | | | | | | | | | new tests for h5repack Description: added tests that do layout type to layout type conversion in a matrix of 9 between compact, contiguous and chunking Solution: Platforms tested: linux afs has problems; I could not telnet to sol and copper, arabica is really slow (meaning waiting 1 minute for a typed character) and the writing of a file gave an error arabica 181% afs: failed to store file (145) afs: failed to store file (145) Misc. update:
* [svn-r8285] Purpose:Pedro Vicente Nunes2004-03-261-0/+1
| | | | | | | | | | | | new file in /test/gen_filters.c Description: Solution: Platforms tested: Misc. update:
* [svn-r8247] Purpose:Pedro Vicente Nunes2004-03-101-0/+2
| | | | | | | | | | | | added the 2 binary files to list Description: Solution: Platforms tested: Misc. update:
* [svn-r8229] Purpose:Pedro Vicente Nunes2004-03-021-0/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | 1) new function for tools library 2) new test script for h5repack Description: 1) currently all the tools (h5dump, h5diff, etc) do not check if a filter is available for reading some dataset that might have a filter not available on the current configuration (the behaviour of the tools until now was to trigger a library error, saying that the dataset cannot be read due to the lack of the filter) Solution: 1) added a new function h5tools_canreadf that checks if a dataset can be read depending on the availability of filters. this function was added in calls for h5diff and h5repack. instead of triggering the library error, a message is printed, saying that the dataset cannot be read (the print is optional, it is on on verbose mode) 2) added a shell script that tests the commannd line tool behaviour of h5repack the script does a series of runs of h5repack with several options on the same file (this file test4.h5 was added to the testfiles dir). then, it runs the h5diff tool, with the input and output files , in each run. the goal of the test is also to check item 1) . the binary file was saved with filters that might not be available on other configurations Platforms tested: linux (all filters enabled) linux (some filters disabled) solaris (some filters disabled) AIX (some filters disabled) windows (all filters on and off ) Misc. update:
* [svn-r8126] Purpose:Quincey Koziol2004-01-311-0/+2
| | | | | | | | | | | | | | | | | Bug fix/optimization Description: Address slowdown in MPI-I/O file metadata operations that was introduced mid-stream. We now _require_ a POSIX compliant parallel file system for the MPI-I/O file driver (as well as for the MPI-POSIX file driver). Also optimized file open operation when the file is being created by reducing the number of collective & syncronizing calls. Additionally, refactor the MPI routines into a common place, eliminating duplicated code. Platforms tested: FreeBSD 4.9 (sleipnir) w/parallel h5committest
* [svn-r8033] Elena Pourmal2004-01-061-0/+1
| | | | | | | | | | | | | | Purpose: Maintenance Description: Fortran APIs MAC OS X port for IBM XL Fortran compiler Solution: Brought back changes from 1.6 branch Platforms tested: pommier, h5comittested; this time h5committest complained about copperpp directory and didn't run; tests on verbena and sol passed. Misc. update:
* [svn-r8022] Purpose:Quincey Koziol2004-01-061-0/+1
| | | | | | | | | | | | | Code cleanup Description: Refactor library testing framework (used for the testhdf5 & ttsafe tests) to remove almost all of the duplicated code, moving the common code into a new 'testframe.c' source file. Platforms tested: FreeBSD 4.9 (sleipnir) w & w/o thread-safety h5committest
* [svn-r7998] Purpose:Pedro Vicente Nunes2003-12-301-0/+1
| | | | | | | | | | | | new h5repack file Description: Solution: Platforms tested: Misc. update:
* [svn-r7995] Purpose:Pedro Vicente Nunes2003-12-291-0/+3
| | | | | | | | | | | | new files for h5repack Description: Solution: Platforms tested: Misc. update:
* [svn-r7963] Purpose:Pedro Vicente Nunes2003-12-161-2/+5
| | | | | | | | | | | | added new source files for h5repack Description: Solution: Platforms tested: Misc. update:
* [svn-r7913] Purpose:Pedro Vicente Nunes2003-12-041-5/+2
| | | | | | | | | | | | | | | | | code clean Description: separated the h5repack code in several modules Solution: Platforms tested: linux IRIX solaris Misc. update:
* [svn-r7906] Purpose:Pedro Vicente Nunes2003-12-021-13/+10
| | | | | | | | | | | | added the new h5diff files Description: Solution: Platforms tested: Misc. update:
* [svn-r7849] Purpose:Quincey Koziol2003-11-141-0/+4
| | | | Update manifest with new files.
* [svn-r7840] Purpose:Bill Wendling2003-11-121-0/+2
| | | | | | | | | | Update Description: Added H5DZ*.c files. Platforms tested: Ran bin/chkmanifest
* [svn-r7813] Purpose:Pedro Vicente Nunes2003-11-031-0/+1
| | | | | | | | | | | | | | | | | | | | | | | | h5diff new feature Description: added compare for attributes a new options flag (-a) was added to the options structure. it is 0 by default (no compare ) the output of the compare is the same that for datasets, and all the other flags also apply for attributes (the memory compare is done in the same function diff_array) all the other requirements for compare of datasets (type, space) are identical too Platforms tested: linux solaris 2.7 IRIX Misc. update:
* [svn-r7775] Purpose:Pedro Vicente Nunes2003-10-281-0/+1
| | | | | | | | | | | | updated manifest for the tools h5diff changes Description: Solution: Platforms tested: Misc. update:
* [svn-r7769] Purpose:Pedro Vicente Nunes2003-10-281-9/+8
| | | | | | | | | | | | | moved h5diff "public API" routines to tools/lib folder Platforms tested: linux solaris 2.7 IRIX Misc. update:
* [svn-r7752] Frank Baker2003-10-271-12/+0
| | | | | | | | Purpose: Removing the files hdf5/doc/html/fortran/h5*_FORTRAN.html as the content has been integrated into the files hdf5/doc/html/RM_H5*.html
* [svn-r7714] Elena Pourmal2003-10-231-1/+0
| | | | | | | | | | | | | Purpose: Maintenance Description: h5createU8 utility is an old h5import utility; removed Solution: Platforms tested: arabica Misc. update:
* [svn-r7707] Purpose:Pedro Vicente Nunes2003-10-221-2/+19
| | | | | | | | | | | | added the new h5diff and h5repack to the list Description: Solution: Platforms tested: Misc. update:
* [svn-r7630] Raymond Lu2003-10-141-0/+1
| | | | Misc. update: MANIFEST for adding perform/perf_meta.c
* [svn-r7610] Purpose:Quincey Koziol2003-10-131-2/+0
| | | | | | | | | | | | | Code cleanup Description: Removed "H5Git" routines, now that there are library routines which perform the same functionality. Platforms tested: FreeBSD 4.9 (sleipnir) Linux 2.4 (verbena) w/FORTRAN too minor for h5committest
* [svn-r7549] Purpose:Quincey Koziol2003-10-061-0/+3
| | | | Add new name datatype in attributes files
* [svn-r7525] Purpose: Update MANIFESTRaymond Lu2003-09-301-1/+1
| | | | Misc. update: clean it up for error test
* [svn-r7521] Purpose: bug fixRaymond Lu2003-09-291-1/+1
| | | | | | | | | Description: The standard output from Error API test has some non-standard message like path name or line number. Solution: use sed to remove any non-standard information in testerror.sh Platforms tested: h5committest
* [svn-r7518] Purpose:Albert Cheng2003-09-271-1/+1
| | | | | | | Corrected an error entry. Platforms tested: bin/chkmanifest
* [svn-r7510] Purpose:Albert Cheng2003-09-251-0/+1
| | | | Updated.
* [svn-r7506] Purpose: Add backward compatbility with v1.6 for Error API; ↵Raymond Lu2003-09-241-2/+9
| | | | | | | | | | | | | | | change error tests to avoid printing error messages. Description: If enable-hdf5v1_6 is configured in, make some functions compatible with v1.6. Error test program print out some error messages as it succeeds. Solution: Use #ifdef H5_WANT_H5_V1_6_COMPAT statements. Use shell script to compare error test output with the standard one. Platforms tested: h5committest
* [svn-r7501] Purpose:Pedro Vicente Nunes2003-09-191-0/+1
| | | | | | | | | added the Dependencies file of h5repack Makefile to the list Misc. update:
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