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* [svn-r16463] merge from trunkPedro Vicente Nunes2009-02-111-0/+2
| | | | | | | | | | | | | | | | | | | | Bug fix: for compound types, the not comparable test for members was not done Solution: for compound types, recursively apply that check Two new cases are added 1) the compound type has a different number of members. Message printed is <obj1> has X members <obj2> has Y members Where X and Y are the number of members of each compound type being compared 2) the compound type has not comparable types (for example a double and an int at the same index) In this case the message Comparison not possible: object1 is of class1 and object2 is of class2 Is replaced with Comparison not possible: object1 has a class1 and object2 has a class2 Modified the test generator program to have these 2 cases Added a shell run for these 2 cases Tested: h5committest
* [svn-r16402] Description:Quincey Koziol2009-02-031-0/+1
| | | | | | | | | | | Bring r16401 back from trunk: Correct error introduced in r16353 with layout version, and add test so it gets caught earlier. Tested on: FreeBSD/32 6.3 (duty) Too minor to require h5committest
* [svn-r16351] merge 16348Pedro Vicente Nunes2009-01-261-0/+8
| | | | | | | | #1368 (E1) h5diff: implement "not comparable" messages. Implemented RFC. The new option is <-c, --compare List objects that are not comparable> added some test cases tested: windows, linux
* [svn-r16310] merge 16299Pedro Vicente Nunes2009-01-141-0/+3
| | | | | | | | | | | Print a message of Storage: information not available When displaying storage information for VL and dataset region types Added 2 shell runs that display this information #818 Tested: windows, linux
* [svn-r16216] Updated for removed file.Albert Cheng2008-12-231-1/+0
| | | | Tested by bin/chkmanifest.
* [svn-r16205] Description:Quincey Koziol2008-12-181-0/+1
| | | | | | | | | | | Bring r16204 back from trunk: Moved v1 B-tree debugging routines into separate module and thinned out header files a bit. Tested on: FreeBSD/32 6.3 (duty) in debug mode Too minor to require h5committest
* [svn-r16203] Maintenance: Added new VMS command file to the MANIFEST file.Elena Pourmal2008-12-161-0/+1
| | | | Platforms tested: My MAC with the chkmanifest script.
* [svn-r16198] Description:Scot Breitenfeld2008-12-151-1/+0
| | | | | Removed the fortran file: ./fortran/src/H5fortran_flags.f90 which is no longer needed.
* [svn-r16181] Description:Quincey Koziol2008-12-111-1/+1
| | | | | | | | | | | | Bring r16180 back from trunk: Rename the current chunk indexing routines module for B-tree indices to better reflect their purpose, and to make the upcoming extensible array index module fit in better. Tested: FreeBSD/32 6.3 Too minor to require h5committest
* [svn-r16123] Add vms/tools/h5stat/make.comRaymond Lu2008-11-241-0/+1
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* [svn-r16087] Purpose: Port H5Pset_chunk_cache, H5Pget_chunk_cache, and ↵Neil Fortner2008-11-171-0/+1
| | | | | | | | H5Dget_access_plist functions to 1.8 branch Tested: kagiso, jam (trunk version tested with h5committest)
* [svn-r15912] Bug fix: #933Albert Cheng2008-10-211-1/+0
| | | | | | | The information of libhdf5_fortran.settings are all included in libhdf5.settings now. Remove it from the source. Tested: kagiso with fortran and C++.
* [svn-r15887] Purpose: Close bug 1332Neil Fortner2008-10-161-0/+3
| | | | | | | | | Description: Improved external link traversal of h5dump. h5dump will now properly avoid all cycles, even those spanning multiple files. Improvement to the output of committed datatypes. Committed datatypes are now checked for uniqueness (like other objects). Tests added for these cases. Tested: kagiso, linew, smirom (h5committest)
* [svn-r15871] Eliminate -c option and make that behavior the default and ↵Pedro Vicente Nunes2008-10-151-1/+0
| | | | | | return 2 instead of -1 on error status Tested: windows, linux
* [svn-r15817] move h5jam testfiles to its own testfiles folderPedro Vicente Nunes2008-10-081-8/+7
| | | | tested: linux
* [svn-r15813] Purpose: Add new source code and tests to WindowsScott Wegner2008-10-081-0/+8
| | | | | | | | | | Description: Many new source files were added from the freespace branch. This checkin adds the code to Windows as well. Note: Some tests are still failing on Windows, but this checkin brings us closer to fixing them. In particular, freespace test fails on compile (Quincey is working on it), and the DLL links test fails at runtime (I'll look into it) Tested: VS2005 on WinXP
* [svn-r15805] Purpose: Add option to h5ls to enable external link traversal.Neil Fortner2008-10-071-0/+4
| | | | | | | | Description: Added -E option to h5ls. When set, this alows h5ls to enter external files (currently only through an external link). The -r option by itself will no longer allow h5ls to traverse external links. Tested: kagiso, linew, smirom (h5committest)
* [svn-r15801] Description:Quincey Koziol2008-10-071-0/+16
| | | | | | | | | | | | | | | | | | | | | | | Bring r15800 back from trunk: - File free space branch changes through r15794 Tested on: Mac OS X/32 10.5.5 (amazon) in debug mode Mac OS X/32 10.5.5 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/Intel compilers w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode
* [svn-r15759] move h5copy testfiles to /tools/h5copy/testfilesPedro Vicente Nunes2008-10-021-2/+4
| | | | tested: linux
* [svn-r15750] move h5repack test files to /tools/h5repack/testfilesPedro Vicente Nunes2008-10-011-17/+19
| | | | tested: linux
* [svn-r15745] Move h5diff testfiles to /tools/h5diff/testfiles Pedro Vicente Nunes2008-10-011-78/+73
| | | | Tested: linux
* [svn-r15726] Description:Scot Breitenfeld2008-09-301-4/+7
| | | | Made changes to reflect the changes made in the fortran directory which merged the fortran trunk into the 1.8 branch.
* [svn-r15720] Added a file with user block data to be used by the h5repack ↵Pedro Vicente Nunes2008-09-291-1/+1
| | | | windows shell script only Note: for the unix shell script this file is not used
* [svn-r15698] renamed input text files to have the extension .txtPedro Vicente Nunes2008-09-251-7/+8
| | | | tested: linux
* [svn-r15697] renamed configuration files to have the extension .confPedro Vicente Nunes2008-09-251-7/+7
| | | | tested: linux
* [svn-r15695] update manifestPedro Vicente Nunes2008-09-241-0/+1
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* [svn-r15694] 1)Pedro Vicente Nunes2008-09-241-8/+12
| | | | | | | | | | | | | | Bug fix #1281 The TEXTFPE was described in the usage (read floats in scientific notation) but was not implemeneted. Solution: remove TEXTFPE from the help system and have the TEXTFPE input type do the same thing as TEXTPF currently does to support backwards compatibility (the format read for both TEXTFPE and TEXTPF is %f) added a test 2) renamed configuration files to have the extension .conf tested: windows, linux
* [svn-r15672] Add missing test file, re-add it to the manifest (sorry).Neil Fortner2008-09-221-0/+1
| | | | Tested: kagiso
* [svn-r15671] Description:Quincey Koziol2008-09-221-1/+0
| | | | Update MANIFEST w/changes to files.
* [svn-r15669] Purpose: Add feature requested in bug #1282Neil Fortner2008-09-211-0/+5
| | | | | | | | | | Description: Adds capability to h5ls to traverse external links when the -r (recursive) option is given. Changes to the way absolute path names are patched in h5trav.c. Changes to the way recursive traversal starting from a non-root group is handled (which also fixes some preexisting issues). Tests added for these cases. Tested: kagiso, smirom, linew (h5committest)
* [svn-r15583] Purpose: Add Windows Fortran DLL export code to separate DEF file.Scott Wegner2008-09-031-0/+1
| | | | | | | | | | Description: In in Fortran source code, there was a great deal of code that was necessary for Windows DLLs, and ignored for others systems. To remove some of the bloat in the source code, we moved these definitions into separate *.def file, which will be used on by the Windows DLL project. Tested: VS2005 on WinXP Note: The Windows project file will still need to be edited-- I will check that in soon.
* [svn-r15581] Added script to build h5perf_serial in standalone mode.Christian Chilan2008-09-021-0/+1
| | | | Tested on kagiso, smirom, and linew.
* [svn-r15508] Scott Wegner2008-08-211-0/+4
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* [svn-r15486] Purpose: Allow library to shut down properly when objects have ↵Neil Fortner2008-08-191-0/+1
| | | | | | | | | | | | | | | | reference count > 1. Description: Added a new field 'app_count' to H5I_id_info_t struct, to track the reference count on an id due to the application. the old 'count' field tracks the total. Generally any id visible to the application gets placed in app_count. Added app_ref boolean parameter to H5I_inc_ref, H5I_dec_ref, H5I_register, H5I_clear_type, and a few other functions, to specify whether the operation(s) being performed on the id(s) are due to the application (TRUE) or not (FALSE). Test added for this case. Tested: kagiso, smirom, linew (h5committest)
* [svn-r15434] new file for h5diff testPedro Vicente Nunes2008-08-051-0/+1
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* [svn-r15160] Purpose: Separate Windows function macro definitions to win32defs.hScott Wegner2008-06-051-0/+1
| | | | | | | | | | | | | | Description: In library code, we try not to use system calls directly, but instead use the HD{function} macro instead. This way, we can map special versions of the call on particular systems. Previously, it was all done in H5private.h. However, in an effort to clean up platform-specific definitions, we move all of the Windows macros into a separate file, win32defs.h. This way, we can use the non-Posix versions that Visual Studio sends warnings about. Some macros are set specifically in the platform-specific header files. Then, any macros left unset will be set by the "default" implementation in H5private.h. This checkin also cleans up various source files to use the HD* macros when possible. Tested: VS2005 on WinXP VS.NET on WinXP h5committest (kagiso, linew, smirom)
* [svn-r15136] Purpose:Albert Cheng2008-06-041-0/+1
| | | | | | | | | | | | | | bug fixes. Description: Added code to create an empty hdf5 (named h5diff_empty.h5) in order to test if h5diff compares correctly an empty hdf5 vs. a non-empty one. Tested: Tested in kagiso of h5diffgentest itself. Verified by h5dump that h5diff_empty.h5 was indeed empty. Then "h5diff h5diff_empty.h5 h5diff_basic1.h5" returned 0 (should have returned non-zero).
* [svn-r15134] Description:Quincey Koziol2008-06-041-0/+1
| | | | | | | | | | Brought revision 15133 back from trunk: Fixed bug in h5ls that prevented relative group listings (like "h5ls foo.h5/bar") from working correctly. Tested on: Mac OS X/32 10.5.3 (amazon)
* [svn-r15125] Purpose: Cleanup unneeded Windows sourceScott Wegner2008-06-021-5/+0
| | | | | | | | | | | | Description: Previously, we maintained some source files that are commonly generated dynamically on other systems. Now, we also generate them on Windows as well. We should remove them from the repository so old versions are not accidentally used. Also, clean up the project files to organize generator programs. Tested: VS2005 on WinXP VS2005 on WinXP x64 VS.NET on WinXP
* [svn-r15120] Purpose: Ignore Windows POSIX-Depreciation warnings in Visual ↵Scott Wegner2008-06-021-0/+3
| | | | | | | | | | Studio 2005 Description: On Windows, we receive many compiler warnings because Microsoft has implemented many "security-enhanced" versions of POSIX functions. However, the old versions still exist, so the warnings can be ignored. By setting a preprocessor definition, we can disable many of these warnings. On a typical HDF5 build, this reduces the number of warnings from ~1500 to ~600 Tested: VS2005 on WinXP
* [svn-r14986] Purpose: Add Windows fixes for new Fortran code.Scott Wegner2008-05-121-0/+2
| | | | | | | | Description: There were a number of small tweaks we needed to make to add the new fortran_1_8 code on Windows. We create new project files, add new source to them, add the test to our test suite, and fix a few typos in the Windows-specific source code. Tested: VS2005 on WinXP
* [svn-r14949] Maintenance: brought serial h5perf tool from trunk; useElena Pourmal2008-05-061-0/+7
| | | | | | | svn merge -r 14824:14945 http://svn.hdfgroup.uiuc.edu/hdf5/trunk/perform command to bring changes in. Platforms tested: kagiso with Intel compilers, smirom with GNU compiler
* [svn-r14948] Add a test for the floating point user defined printf formatPedro Vicente Nunes2008-05-061-0/+2
| | | | | | | | | | | | | | | | Usage is -m T, --format=T Where T - is a string containing the floating point format, e.g '%.3f' The test consists of writing a number with 7 fractional digits (default precision display of %f is 6 digits) and have the 7 digits displayed with -m %.7f fpformat.h5 Tested: windows, linux, solaris Note: the output file was generated in linux, it may be possible that platforms other than the ones tested have a different representation of the number
* [svn-r14943] Maintenance: Added files missed in the previous check-in.Elena Pourmal2008-05-061-1/+6
| | | | Platforms tested: bin/chkmanifest on kagiso
* [svn-r14942] Maintenance: Merged new Fortran APIs and tests from trunk into ↵Elena Pourmal2008-05-061-0/+4
| | | | | | | | | | | hdf5_1_8 branch (used svn merge -r 14505:14941 http://svn.hdfgorup.uiuc.edu/hdf5/trunk/fortran command). Updated MANIFEST Disabled -O3 optimization for gcc 4.3 (long due check-in) Platforms tested: kagiso with PGI compilers, smirom with g95 and v16 option, linew
* [svn-r14861] Description:Quincey Koziol2008-04-241-0/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring revision 14860 back to 1.8 branch, change log for rev 14860 is: Omnibus raw data I/O revisions, with wide-ranging changes and refactoring, in order to prepare for implementing "fast append" feature. These changes remove the majority of the code duplication for raw data I/O which has crept in over the last ten years and introduces a more object- oriented design for operating on different types of dataset storage. Description: Omnibus raw data I/O revisions, with wide-ranging changes and refactoring, in order to prepare for implementing "fast append" feature. These changes remove the majority of the code duplication for raw data I/O which has crept in over the last ten years and introduces a more object- oriented design for operating on different types of dataset storage. Chunked storage no longer has it's own I/O routines, it is now handled as either contiguous (if chunk is not pulled into the cache) or compact (if the chunk is cached in memory). No bug or feature changes, at least intentionally... :-) Tested on: Mac OS X/32 10.5.2 (amazon) w/production
* [svn-r14837] Purpose: Remove ohdr_gentst from Windows projectsScott Wegner2008-04-141-2/+0
| | | | | | | | Description: The ohdr_gentst project exists in order to re-create test input files that are distributed with the source. These projects aren't built by default on most platforms, and the source isn't distributed in release builds. To avoid confusion and bloat, we remove the Windows version of this project. Tested: None, only removed
* [svn-r14679] Removed item c++/examples/testexamples.sh.Albert Cheng2008-02-261-1/+0
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* [svn-r14668] Purpose: Backport of added Windows HL examples from trunkScott Wegner2008-02-251-20/+80
| | | | | Description: The Windows suite of examples for HL C was a very small subset of the examples that exist for other platforms. Now we have all of the HL C examples-- integrated into the VS projects files, and batch test scripts.
* [svn-r14585] Maintenance after 1.8.0 release: Created HISTORY-1_8.txt file ↵Elena Pourmal2008-02-141-0/+1
| | | | | | | | and prepared RELEASE.txt for future entries. Changed version number to 1.8.0-snap0 Added HISTORY-1_8.txt to MANIFEST
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