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* [svn-r22684] Purpose: Jonathan Kim2012-08-151-0/+1
| | | | | | | | | | | | Address HDFFV-7942 - h5diff: incorrect result for comparing attribute data with different type size in same class Description: When comparing attribute data values with same type class but different size, the result was incorrect. It was due to the size difference and got truncated. Fixed to match up the smaller type size to big type size like what dataset does. Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Windows (32-LE cmake), cmake (jam)
* [svn-r22599] FinHDF5 should be generated during build.Allen Byrne2012-07-241-1/+1
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* [svn-r22588] HDFFV-721: h5dump supplies input for h5importAllen Byrne2012-07-191-0/+8
| | | | | Tested: local linux with cmake jam with configure
* [svn-r22568] fix another typo - due to wrong edit state!Allen Byrne2012-07-121-1/+1
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* [svn-r22567] HDFFV-7784: add attributes to the list of file contents option ↵Allen Byrne2012-07-121-0/+2
| | | | | | | | for h5dump. This is accomplished by adding an optional value to the option (-n) Created test and reference files. Tested: local linux with cmake
* [svn-r22566] correct typo of new files namesAllen Byrne2012-07-121-2/+2
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* [svn-r22563] HDFFV-8095: index order of links wrongAllen Byrne2012-07-121-0/+4
| | | | | | | | Create setters for indexing options in h5trav.c to be set before the obj table is created. Revert h5trav_print to remove now duplicated parameters. Added test and testfiles. Tested: local linux with cmake
* [svn-r22561] Add errfile to list.Allen Byrne2012-07-121-0/+1
| | | | Create missing errfile, edit ddl file for test only on linux (not using cmake).
* [svn-r22557] Add missing test fileAllen Byrne2012-07-111-0/+1
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* [svn-r22556] HDFFV-7936: added error files in h5dump folder and adjusted ↵Allen Byrne2012-07-111-0/+34
| | | | | | | scripts to compare error files. Tested: local linux with cmake, jam with make check
* [svn-r22548] added test for "-w0" optionAllen Byrne2012-07-101-0/+2
| | | | Tested: local linux
* [svn-r22544] Add test to verify use of named datatypesAllen Byrne2012-07-101-0/+2
| | | | | HDFFV-2687 Tested: local linux with cmake
* [svn-r22531] HDFFV-5942: sort options with contents optionAllen Byrne2012-07-091-0/+2
| | | | | | | Added static local variables in h5trav to hold the index_by and index_order values. Defaults are set. H5dump only use of the trav_print function, added two parameters and passed in the sort_by and sort_order variables. Tested: local linux
* [svn-r22516] Add new testfiles for h5dump with eight varieties of ints and ↵Allen Byrne2012-07-051-0/+4
| | | | | | used in an Attribute and Compound datatypes. Tested: local linux using CMake
* [svn-r22506] HDFFV-7782: resolve names of tests files with tests - added two ↵Allen Byrne2012-07-021-29/+31
| | | | | | copies of references files and adjusted CMake and linux test script. Tested: local linux w/ CMake
* [svn-r22499] Add seconf new file!Allen Byrne2012-06-271-0/+1
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* [svn-r22497] Added new fileAllen Byrne2012-06-271-0/+1
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* [svn-r22444] (1) fix for making MEM_GHEAP as MEM_DRAWVailin Choi2012-06-071-0/+1
| | | | | | | (2) fix to extend into the aggregator based on threshold (3) fix for the "flavor" logging problem (4) fix for test failures due to the above fixes (5) bug fix for h5stat when h5stat against a non-existing file
* [svn-r22431] Extension is cpp!Allen Byrne2012-06-041-1/+1
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* [svn-r22430] CMake and configure synchronization effort. CMake added most ↵Allen Byrne2012-06-041-0/+2
| | | | | | | | tests and options: DEBUGPKG not addressed. Still needed: compiler wrapper scripts Tested: local linux(cmake) and h5committest
* [svn-r22426] Add examples/README file to be installed with examples.Larry Knox2012-06-021-1/+1
| | | | Text file only, but tested with h5committest.
* [svn-r22391] HDFFV-7999: h5dump did not display H5T_DSET_UTF8.Allen Byrne2012-05-221-0/+2
| | | | | | Changed if/else block to switch like in h5ls, and distinguished between ERROR and UNKNOWN. Reviewed by JKM Tested: local linux
* [svn-r22390] Break out the packed bits tests into a new script.Allen Byrne2012-05-221-0/+1
| | | | | reconfigure on jam Tested: local linux
* [svn-r22369] Change case of filename to match file.Larry Knox2012-05-151-1/+1
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* [svn-r22368] change file name caseAllen Byrne2012-05-141-1/+1
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* [svn-r22319] Purpose:Jonathan Kim2012-04-261-0/+5
| | | | | | | | | | | | | | Fix for HDFFV-7998-h5diff: incorrect behavior and output for comparing symbolic dangling links without following-symlinks option Description: Fix not to check and display dangling link status without --follow-symlinks option. Berfor the fix, when comparing symbolic link to symbolic link without follow-symlinks option, h5diff followed to check if those links are dangling or not. It caused to display output incorrectly (dangling link instead of symbolic link). The fix also improved performance when comparing lots of symbolic links without the --follow-symlinks option. Test cases were added and tagged with jira#. Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Windows (32-LE cmake), Cmake (jam)
* [svn-r22277] Purpose:Jonathan Kim2012-04-111-0/+1
| | | | | | | | | | | | Fix for HDFFV-7993 - h5repack fails with error "chunk size must be <= maximum dimension size for fixed-sized dimensions" Description: Fixed a failure when change the chunk size of a specified chunked dataset with unlimited max dims. Also took care of converting to contiguous and compact from the dataset. Test cases were added and tagged with jira#. Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Windows (32-LE cmake), Cmake (jam)
* [svn-r22219] Description:Quincey Koziol2012-03-311-21/+26
| | | | | | | | Merge "file image" changes from feature branch back to trunk. Tested on: Mac OSX/64 10.7.3 (amazon) w/debug (h5committest upcoming)
* [svn-r22176] Purpose:Jonathan Kim2012-03-281-0/+2
| | | | | | | | | | | | Fix for HDFFV-7644 GMQS: h5diff - incorrect behaviors when comparing HDF5 files with different type of objects (dataset, group, type) as common objects Description: Fixed failure for comparing same named object with different object types in comparing groups. (common object comparison) Prior to the fix, h5diff resulted in error. After the fix, h5diff detects such case as non-comparable and display messages accordingly. Test cases were added and tagged with jira#. Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Windows (32-LE cmake), Cmake (jam)
* [svn-r22114] Purpose:Jonathan Kim2012-03-211-0/+5
| | | | | | | | | | | | | | | Fix for HDFFV-7837 - h5diff: incorrect behavior with exclude-path option when unique object exist only in one file Description: If unique objects exists only in one file and try to exclude the unique objects with --exclude-path option, h5diff missed excluding some objects. Fixed to exclude objects correctly in such case. Test cases were added and tagged with jira#. Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Windows (32-LE cmake), Cmake (jam)
* [svn-r22090] Reorder tools/h5jam/testfiles orderingAllen Byrne2012-03-191-3/+3
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* [svn-r22075] Add test for multiple files with h5ls and h5dump.Allen Byrne2012-03-151-0/+1
| | | | Tested: local linux
* [svn-r22068] HDFFV-7876: wildcard filenamesAllen Byrne2012-03-141-0/+3
| | | | | | The test scripts for cmake, on windows, and the h5ls shell script do not work properly. Tested: h5committest
* [svn-r22038] Purpose:Jonathan Kim2012-03-091-0/+4
| | | | | | | | | | | | | | Fix for HDFFV-7835 h5diff: incorrect result for comparing the two same type symlinks as dangling links. Description: When two symbolic dangling links are compared with --follow-symlinks option, the result should be same. It works for comparing two files, but didn't work for comparing two objects. Test cases were added and tagged with jira#. Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Windows (32-LE cmake), Cmake (jam)
* [svn-r22028] add new test fileAllen Byrne2012-03-051-0/+1
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* [svn-r21992] Remove old testfileAllen Byrne2012-02-271-1/+0
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* [svn-r21953] HDDFV-7560: h5dump refactoringAllen Byrne2012-02-171-0/+8
| | | | Tested: local linux
* [svn-r21931] HDFFV-7689 - could not not use a "[" character in a dataset name.Allen Byrne2012-02-131-0/+2
| | | | | | A second problem also discovered was an if statement that should have comapered lengths of a string actually was comapring addreeses. Once thatt was fixed, The "[" character could be used but broke other functionality. Consultation with tools team resulted in the creation of a "--no-subset" option to disable interpretation of "[" character as a subsetting compact-form. This also eliminated and cleaned up the code containing the plomatic if statement. Tested: local linux and added test, CMake updated autotools test to be added next.
* [svn-r21890] Purpose:Jonathan Kim2012-01-241-0/+1
| | | | | | | | | | | | | | | | | Fix for HDFFV-7836 h5diff: displays error stack message for comparing the two dangling symlink with follow-symlinks option Description: While ago, to improve performance, skipping same object checking (h5tools_is_obj_same()) was added. However the checking function doesn't understand about the dangling link and caused the issue. Since handling dangling link code section already implemented, move the checking function after handling dangling-links to address the problem. Test was added and tagged with jira#. Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Windows (32-LE cmake), Cmake (jam)
* [svn-r21865] Purpose:Jonathan Kim2012-01-051-0/+2
| | | | | | | | | | | | | Fix for HDFFV-7838 h5ls: segfault for handling region reference in attribute with -v option Description: Segfault occurred when h5ls access region reference data in an attribute. This didn't occurred when -v option was used. The cause was "h5tool_format_t info;" struct variable members were accessed without proper values were assigned (was NULL), so printf failed later in the code. Tested: jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), cmake-Windows (32-LE)
* [svn-r21856] Remove cdash variables for use with CTestScript.cmake processing.Allen Byrne2011-12-301-1/+0
| | | | Tested: windows
* [svn-r21847] CTestScript generalized and not needed inside project.Allen Byrne2011-12-221-1/+0
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* [svn-r21840] Created CTestScript.cmake to better control the cmake ↵Allen Byrne2011-12-211-0/+1
| | | | | | processing of configuration, compile, test, and packing. Tested: local linux
* [svn-r21814] HDFFV-2567 - added test for be generated files with at least 9 ↵Allen Byrne2011-12-051-0/+2
| | | | | | attributes at root Tested: local linux
* [svn-r21787] Unify CMake config macros, split base macros from ext lib macrosAllen Byrne2011-12-011-0/+1
| | | | Tested: local linux
* [svn-r21710] CMake FindMPI module changed to look for fortran libs. Cmake ↵Allen Byrne2011-11-031-0/+1
| | | | | | | | files updated to link with fortran mpi libs. Updated cacheinit.cmake to set num of procs to 3 for hdf testing. Tested: local linux and on windows 7
* [svn-r21702] remove obsolete cmake config module - exists in cmake 2.8.6Allen Byrne2011-11-021-1/+0
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* [svn-r21397] Fix mis-spell non_comparables#.h5. It's from previous checkin ↵Jonathan Kim2011-09-161-2/+2
| | | | for HDFFV-7693. (r21396)
* [svn-r21396] Purpose:Jonathan Kim2011-09-161-0/+5
| | | | | | | | | | | | | | | | | | | | HDFFV-7693 - h5diff produces different behavior between versions: 1.8.3 and 1.8.6 Description: There were two issues on this. One was not displaying all the comparable objects if non-comparable object/attribute exist and compared before comparables ones. This issue occurred after 1.8.4 release. This is the issue from user. The other issue was not displaying all the comparable attributes, if non-comparable object/attribute exist and compared ahead. This issue were exist even before 1.8.4 release. So it's possible some attribute comparison may have not displayed correctly in the past, if non-comparable data were exist in common object. Fixed h5diff to display all the comparable object and attribute regardless of non-comparables. Tested: jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Cmake (jam, Windows)
* [svn-r21358] Purpose:Jonathan Kim2011-09-021-0/+3
| | | | | | | | | | | HDFFV-7712 - h5diff: segfault over combinations of complex container types (compound, array, vlen) Description: - Fixed segfault over dataset with container types (array,lven) with multiple nested compound types. (ex: compound->array->compound, compound->vlen->compound) Tested: jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Cmake (jam)
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