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* [svn-r12739] Added Direct I/O driver to VFD. It's only supported by SGI ↵Raymond Lu2006-10-101-0/+2
| | | | | | | | | | Altix (cobalt). There's a configure option --enable-direct-vfd/--disable-direct-vfd to enable/disable Direct I/O support. The default is enabled. There's a small test in test/vfd.c. Another way to test it is to set environment variable HDF5_DRIVER to "direct" and run "make check" in the test/ directory. There'll be some further improvement in the following checkin including allowing user to provide memory boundary value, file block size, and copying buffer size.
* [svn-r12708] Description:Quincey Koziol2006-10-031-0/+1
| | | | | | | | | | | | | | | | | | | Add the "use the latest version of the format" support to datatype messages. And a regression test to check that it's working. Also, found that we have been over-allocating space for compound datatype messages (when they have array datatypes or can use the latest version of the format) and trimmed the size back. Clean up datatype & dataspace encode/decode routines by having them allocate & release "fake" file structures, which gets them out of needing to "know" about the internals of file structures. Other minor whitespace/formatting cleanups, etc. Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r12700] Alert:Quincey Koziol2006-10-021-0/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | File format is not stable, don't keep files produced! Description: First stage of checkins modifying the format of groups to support creation order. Implement "dense" storage for links in groups. Try to clarify some of the symbols for the H5L API. Add the H5Pset_latest_format() flag for FAPLs, to choose to use the newest file format options (including "dense" link storage in groups) Add the H5Pset_track_creation_order() flag for GCPLs, to enable creation order tracking in groups (although no index on creation order yet). Remove --enable-group-revision configure flag, as file format issues are now handled in a backwardly/forwardly compatible way. Clean up lots of compiler warnings and other minor formatting issues. Tested on: FreeBSD/32 4.11 (sleipnir) w/threadsafe Linux/32 2.4 (heping) w/FORTRAN & C++ Linux/64 2.4 (mir) w/enable-v1.6 compa Mac OSX/32 10.4.8 (amazon) AIX 5.3 (copper) w/parallel & FORTRAN
* [svn-r12698] Updated to include t_pflush tests.Leon Arber2006-10-011-0/+2
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* [svn-r12689] Added bin/gcov_script to the MANIFESTJames Laird2006-09-271-0/+1
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* [svn-r12685] added a new binary file for h5dump testfilesPedro Vicente Nunes2006-09-261-0/+1
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* [svn-r12676] Adding jamtest.bat line for windows.MuQun Yang2006-09-201-0/+1
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* [svn-r12671] Pedro Vicente Nunes2006-09-181-0/+4
| | | | | | | added a test file generator program for h5copy, modified test script to use that file, added binary file to repo tested on heping, shanti
* [svn-r12640] Frank Baker2006-09-041-0/+19
| | | | | | | | Description: Add per-directory abbreviated copyright notices (abbreviated COPYING files pointing to full notices). Tested: MANIFEST verified; not otherwise tested.
* [svn-r12624] Added external link files to MANIFEST (oops!).James Laird2006-08-241-0/+2
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* [svn-r12605] Description:Quincey Koziol2006-08-211-0/+5
| | | | | | | | | | | | | Break out a bunch of the misc. routines that were in src/H5.c into more specific modules. Add optimized fletcher32 checksum routine, for checksumming metadata as well as raw data. Tested On: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2) Will test further after checkin...
* [svn-r12592] Description:Quincey Koziol2006-08-171-0/+1
| | | | | | | | | | | | | | | | | | | | | Several changes, all mooshed together: - Add support for "tiny" objects - which can be stored in the heap ID itself, instead of in the heap data blocks. - Flesh out support for compressed direct blocks, but comment it out until John's got some metadata cache changes in place to support it. - Add support for applying I/O pipeline filters to 'huge' objects - Refactor 'huge' object code to store information for 'huge' objects directly in the heap ID, when there are I/O pipeline filters applied to the heap (and the heap ID is large enough to hold the information) - Update h5debug tool to correctly handle 'huge' & 'tiny' objects. - Misc. other code cleanups, etc. Tested on: FreeBSD/32 4.11 (sleipnir) Linux/64 2.4 (mir) Solaris/64 2.9 (shanti)
* [svn-r12568] Description:Quincey Koziol2006-08-121-1/+1
| | | | | | | | | Rename some files, to better align with the names of the functions within them. Tested on: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r12562] Description:Quincey Koziol2006-08-101-0/+2
| | | | | | | | | | | | Initial revision to add support for "huge" objects in the heap (which are actually stored directly in the file, but are tracked with v2 B-tree that is accessed through heap header). Testing: FreeBSD 4.11 (sleipnir) Linux/64 2.4 (mir) Linux/32 2.4 (heping) Mac OS X.4 (amazon)
* [svn-r12559] Maintenance for VMSElena Pourmal2006-08-091-0/+1
| | | | | | | | | Added files created by James for user-define links to the command files Added new script check_h5jam.com to test h5jam/h5unjam; test script needs more work. Platforms tested: VMS server and test script only.
* [svn-r12545] Description:Quincey Koziol2006-08-041-0/+1
| | | | Add external link test file
* [svn-r12536] updated for the newly added file, ./tools/testfiles/nosuchfile.ls.Albert Cheng2006-08-041-0/+1
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* [svn-r12528] Added User-Defined links to the library.James Laird2006-08-021-0/+15
| | | | | | | | | | | | | | Users can create external links using H5L_create_external(). These links point to an object in another HDF5 file. Users can alter the behavior of external links or create new kinds of links by registering callbacks using the H5L interface. Added tests, tools support, etc. Also a number of other, minor changes have been made (some restructuring of the H5L interface, for instance). Additional documentation and examples are forthcoming.
* [svn-r12526] Description:Elena Pourmal2006-08-021-0/+1
| | | | | | | | Added test script to test h5import tool; added new source file to the make.com file in the src directory. Platforms tested: Only h5import was tested on the VMS server
* [svn-r12525] Description:Quincey Koziol2006-08-021-0/+1
| | | | | | | | | | | Refactored free space manager to use metadata cache for serialized free space sections. This speeds up the fractal heap test considerably... Tested: FreeBSD 4.11 (sleipnir) Linux 2.4/32 (chicago) Linux 2.4/64 (mir) Mac OS X (amazon)
* [svn-r12523] Description:Elena Pourmal2006-08-011-0/+2
| | | | | | | Added command files to compile and test h5copy tool. Platfroms tested: VMS server
* [svn-r12518] h5dump binary output:Pedro Vicente Nunes2006-07-311-1/+2
| | | | | | | 1. changed the -F flag option names to "BE and "LE" for big and little endian 2. added a more verbose usage message for these options 3. add a new test 4. add a make clean instruction to *.bin
* [svn-r12513] Pedro Vicente Nunes2006-07-281-0/+1
| | | | | new feature h5dump binary output. use little and big endian type conversions
* [svn-r12512] Added check_h5repack.com file to MANIFESTElena Pourmal2006-07-271-0/+1
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* [svn-r12509] Added command file to test h5diff utility.Elena Pourmal2006-07-271-0/+1
| | | | All tests passed on the VMS server.
* [svn-r12508] MuQun Yang2006-07-271-0/+1
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* [svn-r12498] Added script to test h5ls tool on VMS system. All tests passed ↵Elena Pourmal2006-07-261-0/+1
| | | | | | | | | | except for the last one h5ls -w80 -v -S tattr2.h5 h5ls prints "native" for all types instead of the complete datatype definition. I will look into the problem next.
* [svn-r12497] Update MANIFEST so that new windows dsp file binread.dsp is ↵MuQun Yang2006-07-261-0/+1
| | | | | | included. Forgetting updating MANIFEST may be the reason why alpha release doesn't include binread.dsp and causes the problem on windows.
* [svn-r12488] added a missing file to manifestPedro Vicente Nunes2006-07-211-0/+1
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* [svn-r12482] new tool h5copyPedro Vicente Nunes2006-07-191-0/+6
| | | | | | | | it uses the API function H5Gcopy to copy groups and datasets from file to file, read from a command line note: the test script is not finished yet tested on heping, copper, shanti
* [svn-r12467] Rename h5stat output file to avoid lower/upper-case filename ↵MuQun Yang2006-07-141-1/+1
| | | | clash on Windows
* [svn-r12465] Add regression test to check that the library handles files ↵Quincey Koziol2006-07-141-0/+2
| | | | | | | | with merged object header messages properly. Too minor to require h5committest
* [svn-r12453] Purpose:James Laird2006-07-051-0/+7
| | | | | | | Documentation update Description: Updated MANIFEST and RELEASE.txt for H5L change
* [svn-r12444] Purpose:Pedro Vicente Nunes2006-06-281-0/+1
| | | | | | | | | | | | | | | | | | | | new feature Description: added support for h5dump to dump binary data using the file type format added one test to the test script that tests this Solution: Platforms tested: mir shanti copper Misc. update:
* [svn-r12437] Purpose:Pedro Vicente Nunes2006-06-261-0/+3
| | | | | | | | | | | | | | | | | | | | | | new feature. h5dump output of binary data Description: a new switch -b FILE_NAME that dumps the contents of memory data to file FILE_NAME in binary form new program binread.c that reads the contents of this file and outputs it to stdout added a test for the h5dump shell script that does a run of -b the binread.c program reads the data used in this run, usage is ./binread FILE_NAME Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r12434] Purpose: MaintenanceElena Pourmal2006-06-221-0/+1
| | | | | | | | | | | | Description: Added support for HPUX11.23 Solution: Added configuration file for the system. Both C, C++, F90, HL 32-bit and 64-bit are supported. Known problems: C++ library will not build in 64-bit mode if shared is enabled. Platforms tested: HPUX 11.23 at UMKC Misc. update:
* [svn-r12429] Purpose: Alpha Open VMS portElena Pourmal2006-06-211-0/+1
| | | | | | | | | | | | | | | | Description: Added a command file for testing tools; it has a framework to do exactly (almost) what UNIX tools test scripts do: - run test tool and save output - compare output with expected result - figure out the difference and - print PASSED /*FAILED* in a manner similar to the UNIX output It needs to be populated with more tests and reused for other tools. Solution: Platforms tested: VMS server Misc. update:
* [svn-r12427] Purpose:Pedro Vicente Nunes2006-06-201-0/+1
| | | | | | | | | | | | new file with HL fortran exampleA Description: Solution: Platforms tested: Misc. update:
* [svn-r12417] Purpose: MaintenanceElena Pourmal2006-06-181-0/+7
| | | | | | | | | | | Description: I added new tests/files for the h5stat tool. MANIFEST was updated accordingly. Solution: Platforms tested: heping, shanti Misc. update:
* [svn-r12416] Purpose: MaintenanceElena Pourmal2006-06-171-0/+3
| | | | | | | | | | | | | | Description: Added test script and two test files in the tools/misc/testfiles directory for testing h5stat tool; modified Makefile.am in tools/misc and configure.in files to run the new test script; reran bin/recofigure to update relevant configuration files; updated MANIFEST Solution: Platforms tested: heping with in place and srcdir builds; will do more testing after the checkin. Misc. update:
* [svn-r12411] Purpose:James Laird2006-06-131-1/+1
| | | | | | | | | | | | | | Bug fix - bugzilla #552 Description: On Cray X1, trying to use : as an argument confused the system. Solution: Added a test in configure to see if : as an argument is bad. If so, skipped the test. Platforms tested: mir, Cray X1 (change to configure only)
* [svn-r12375] Purpose: UpdateRaymond Lu2006-05-241-0/+1
| | | | | | | Solution: Misc. update: added hl/test/dtype_file_readable.txt
* [svn-r12359] Purpose: UpdateRaymond Lu2006-05-191-0/+1
| | | | Misc. update: added hl/test/dtype_file.txt.
* [svn-r12354] Purpose:Pedro Vicente Nunes2006-05-181-0/+1
| | | | | | | | | | | | | manifest update Description: one new file that was not updated yesterday Solution: Platforms tested: Misc. update:
* [svn-r12349] Purpose:Quincey Koziol2006-05-151-1/+8
| | | | | | | | | | | | | | | Code checkpoint Description: Checkpoint fractal heap improvements, as well as move the free space manager code that it's using into a separate package. Platforms tested: FreeBSD 4.11 (sleipnir) Linux 2.4/64 (mir) w/C++ & FORTRAN Linux 2.4/32 (heping) Solaris 2.9 (shanti) AIX 5.? (copper) w/FORTRAN & parallel
* [svn-r12320] Purpose:Quincey Koziol2006-05-021-2/+2
| | | | | | | | | | code cleanup Description: Finish H5FS->H5CS internal API name changes... Platforms tested: FreeBSD 4.11 (sleipnir) w/ & w/o --enable-codestack
* [svn-r12317] Purpose:Quincey Koziol2006-04-301-0/+1
| | | | | | | | | | | | | | | | Code checkpoint Description: More progress on fractal heap, can now re-open an existing heap, although the free space algorithm still needs work. Also, use the new "pinned entry" metadata cache code. Platforms tested: FreeBSD 4.11 (sleipnir) Linux 2.4 (heping) Solaris 9 (shanti) Linux 2.4/64 (mir)
* [svn-r12314] Purpose:Quincey Koziol2006-04-291-23/+25
| | | | | | | | | | | | | | Code cleanup Description: Big clean up on high-level library code, including: - Removing include of HDF5 private header file(!) - Reduce number of compiler warnings - Untangle header files, etc. Platforms tested: FreeBSD 4.11 (sleipnir) w/C++ Linux 2.4/64 (mir) w/C++ & FORTRAN
* [svn-r12311] Purpose:John Mainzer2006-04-281-0/+1
| | | | | | | | | | | | | | | | | | | | | | | | | Add pinned entry capability to cache. Description: For frequently accessed cache entries, the protect/unprotect overhead is sometimes a bottleneck. Solution: Allow entries to be pinned in the cache. Pinned entries can't be evicted, but can be flushed or modified. Platforms tested: h5committested -- minus one small typo in test/cache.c whose fix was tested on copper and heping only. Misc. update:
* [svn-r12297] Purpose:Pedro Vicente Nunes2006-04-251-6/+2
| | | | | | | | | | | | | | | | | new feature Description: added support for the printout of dataset region references differences added a new test for this merged the h5diff generator of test files into a single file Solution: Platforms tested: linux 32, 64 solaris Misc. update: