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* [svn-r15485] Purpose: Allow library to shut down properly when objects have ↵Neil Fortner2008-08-191-0/+1
| | | | | | | | | | | | | | | | reference count > 1. Description: Added a new field 'app_count' to H5I_id_info_t struct, to track the reference count on an id due to the application. the old 'count' field tracks the total. Generally any id visible to the application gets placed in app_count. Added app_ref boolean parameter to H5I_inc_ref, H5I_dec_ref, H5I_register, H5I_clear_type, and a few other functions, to specify whether the operation(s) being performed on the id(s) are due to the application (TRUE) or not (FALSE). Test added for this case. Tested: kagiso, smirom, linew (h5committest)
* [svn-r15465] remove h52jpegPedro Vicente Nunes2008-08-121-10/+0
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* [svn-r15429] new test for h5diffPedro Vicente Nunes2008-08-041-0/+1
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* [svn-r15316] added one more palette to the test generator filePedro Vicente Nunes2008-07-031-3/+3
| | | | tested: windows, linux
* [svn-r15314] moved h5jam test files to tools/h5jam/testfilesPedro Vicente Nunes2008-07-031-6/+9
| | | | tested: linux
* [svn-r15307] moved testfiles from hl/tools/testfiles to ↵Pedro Vicente Nunes2008-07-021-3/+4
| | | | | | hl/tools/gif2h5/testfiles tested: linux
* [svn-r15292] moved h52jpeg to /hl/tools/h52jpegPedro Vicente Nunes2008-06-281-8/+8
| | | | tested: linux
* [svn-r15260] new location for h5copy filesPedro Vicente Nunes2008-06-231-2/+2
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* [svn-r15248] new location for h5repack filesPedro Vicente Nunes2008-06-201-16/+16
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* [svn-r15246] Changed the shell script to avoid doing a cd $srcdirPedro Vicente Nunes2008-06-201-3/+0
| | | | | | | | | | | | The name of the files are now given by its full name relative to $srcdir To avoid the printing of the complete full path of the test file, that hides all the other parameters for long paths, the printing of the command line is done first in TESTING with the name only of the test file, not its full path the printing in the expected output that had the file name was removed as well as 3 tests that tested error messages in which the file name was present tested: linux (in 2 different build directories relative to $srcdir), solaris
* [svn-r15238] Pedro Vicente Nunes2008-06-191-77/+77
| | | | | | Moved all h5diff testfiles from /tools/testfiles to tools/h5diff/testfiles Tested: linux, solaris
* [svn-r15223] new testfile location for h52jpegPedro Vicente Nunes2008-06-171-1/+2
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* [svn-r15220] new files for h52jpegPedro Vicente Nunes2008-06-161-1/+2
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* [svn-r15218] new test files for h52jpegPedro Vicente Nunes2008-06-161-0/+3
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* [svn-r15186] new entry for h52jpeg MakefilesPedro Vicente Nunes2008-06-101-0/+2
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* [svn-r15154] Purpose: Rename new source file from win32defs.h to H5win32defs.h.Scott Wegner2008-06-051-1/+1
| | | | | | | | Description: To follow the naming convention for source files, we simply rename the new header to H5win32defs.h Tested: None, simple name change.
* [svn-r15150] Purpose: Separate Windows function macro definitions to win32defs.hScott Wegner2008-06-051-0/+1
| | | | | | | | | | | | | | Description: In library code, we try not to use system calls directly, but instead use the HD{function} macro instead. This way, we can map special versions of the call on particular systems. Previously, it was all done in H5private.h. However, in an effort to clean up platform-specific definitions, we move all of the Windows macros into a separate file, win32defs.h. This way, we can use the non-Posix versions that Visual Studio sends warnings about. Some macros are set specifically in the platform-specific header files. Then, any macros left unset will be set by the "default" implementation in H5private.h. This checkin also cleans up various source files to use the HD* macros when possible. Tested: VS2005 on WinXP VS.NET on WinXP h5committest (kagiso, linew, smirom)
* [svn-r15133] Description:Quincey Koziol2008-06-041-0/+1
| | | | | | | | | | | | | | | | | | | Fixed bug in h5ls that prevented relative group listings (like "h5ls foo.h5/bar") from working correctly. Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.5.3 (amazon) in debug mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
* [svn-r15130] Updated with the added file ./tools/testfiles/h5diff_empty.h5.Albert Cheng2008-06-031-0/+1
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* [svn-r15126] Purpose: Cleanup unneeded Windows sourceScott Wegner2008-06-021-5/+0
| | | | | | | | | | | | Description: Previously, we maintained some source files that are commonly generated dynamically on other systems. Now, we also generate them on Windows as well. We should remove them from the repository so old versions are not accidentally used. Also, clean up the project files to organize generator programs. Tested: VS2005 on WinXP VS2005 on WinXP x64 VS.NET on WinXP
* [svn-r15117] added repo entries for the h52jpeg test generator programPedro Vicente Nunes2008-06-021-0/+1
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* [svn-r15103] added h52jpegPedro Vicente Nunes2008-05-301-1/+2
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* [svn-r14975] Purpose: Add Windows fixes for new Fortran code.Scott Wegner2008-05-121-0/+2
| | | | | | | | Description: There were a number of small tweaks we needed to make to add the new fortran_1_8 code on Windows. We create new project files, add new source to them, add the test to our test suite, and fix a few typos in the Windows-specific source code. Tested: VS2005 on WinXP
* [svn-r14936] add 2 new files for the h5dump user defined floting point formatPedro Vicente Nunes2008-05-061-0/+2
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* [svn-r14923] Maintenance: This check-in merges changes from the fortran_1_8 ↵Elena Pourmal2008-05-031-0/+9
| | | | | | | branch back into the trunk (up to revision 14921) Platforms tested: kagiso with g95 and Intel compilers; more testing will be done after checking in a fresh copy from the trunk. New code itself was tested with all Fortran compilers available at THG
* [svn-r14903] Undoing change committed in r14902.Scot Breitenfeld2008-04-301-66/+163
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* [svn-r14902] Merged fortran_1_8 branch changes r14505:14901 into the trunk. ↵Scot Breitenfeld2008-04-301-163/+66
| | | | New fortran wrappers added.
* [svn-r14860] Description:Quincey Koziol2008-04-241-0/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Omnibus raw data I/O revisions, with wide-ranging changes and refactoring, in order to prepare for implementing "fast append" feature. These changes remove the majority of the code duplication for raw data I/O which has crept in over the last ten years and introduces a more object- oriented design for operating on different types of dataset storage. Chunked storage no longer has it's own I/O routines, it is now handled as either contiguous (if chunk is not pulled into the cache) or compact (if the chunk is cached in memory). No bug or feature changes, at least intentionally... :-) Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.5.2 (amazon) in debug mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
* [svn-r14854] Purpose: Remove many spurious compiler warnings in Visual StudioScott Wegner2008-04-211-0/+3
| | | | | | | | | | Description: On Windows, many POSIX functions have been replaced by a similarly-named function with some additional security-checking. Visual Studio issues a warning each time the POSIX version is used, recommending that we replace it with the new version. This results in thousands of errors when building the HDF5 library. This checkin adds a Visual Studio "Property Sheet", which has been applied to all library projects, and defines a number of preprocessors to suppress these warnings. The warnings have been disabled only in Visual Studio 2005 project files, as VS.NET doesn't support property sheets. Tested: VS2005 on WinXP
* [svn-r14846] Purpose: Update MANIFEST for last commitScott Wegner2008-04-141-0/+1
| | | | | | | | Description: Add ./windows/hdf5build_examples.BAT to MANIFEST Tested: chkmanifest on kagiso
* [svn-r14838] Purpose: Remove ohdr_gentst from Windows projectsScott Wegner2008-04-141-2/+0
| | | | | | | | Description: The ohdr_gentst project exists in order to re-create test input files that are distributed with the source. These projects aren't built by default on most platforms, and the source isn't distributed in release builds. To avoid confusion and bloat, we remove the Windows version of this project. Tested: None, only removed
* [svn-r14828] Included files of the serial benchmarking tool.Christian Chilan2008-04-111-0/+7
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* [svn-r14819] Purpose: Update MANIFEST for previous checkinScott Wegner2008-04-081-0/+4
| | | | | Tested: chkmanifest on smirom
* [svn-r14807] add an entry to a new file /test/chunk_info.cPedro Vicente Nunes2008-04-071-0/+1
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* [svn-r14677] Purpose: Update MANIFESTBinh-Minh Ribler2008-02-261-1/+0
| | | | | | | | Description: Removed ./c++/examples/testexamples.sh Platforms tested: Not needed.
* [svn-r14614] add/remove previous filesPedro Vicente Nunes2008-02-191-33/+63
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* [svn-r14608] Purpose: Add missing Windows HL C examplesScott Wegner2008-02-191-4/+64
| | | | | | | | | Description: The Windows suite of examples for HL C was a very small subset of the examples that exist for other platforms. Now we have all of the HL C examples-- integrated into the VS projects files, and batch test scripts. Tested: VS2005 on WinXP VNET on WinXP
* [svn-r14605] Purpose: Rename Windows HL Example projects to match other ↵Scott Wegner2008-02-181-20/+20
| | | | | | | | | | | | | platforms Description: The collection of HL C examples that we distribute for Windows is incomplete. I wasn't aware of it until Pedro pointed it out, because we use different (although similar) names for the generated files. This checkin changes the naming to follow Linux, in preparation to add the rest of the HL examples to Windows. Note: I believe I've updated the MANIFEST accordingly, but I may have missed something-- I'll check on Linux shortly after this commit. Tested: VS2005 on WinXP VS.NET on WinXP
* [svn-r14564] Maintenance: Added new history files according to the proposed ↵Elena Pourmal2008-02-131-1/+2
| | | | | | and agreed policy see http://www.hdfgroup.uiuc.edu/RFC/HDF5/QA/RFC-HIS-REL-1.8_Feb6.pdf
* [svn-r14432] Purpose: Update Windows documentation concerning VS6Scott Wegner2008-01-161-1/+0
| | | | | Details: We no longer support Visual Studio 6.0, so we note it in the documentation. Also, updated the path references in VS.NET documentation
* [svn-r14431] Purpose: Fix MANIFESTScott Wegner2008-01-161-2/+0
| | | | | | | | Description: Minor edit to MANIFEST, delete a few entries I missed last time. This brings it up to date. Tested: chkmanifest on smirom
* [svn-r14429] Purpose: Initial MANIFEST updateScott Wegner2008-01-161-269/+207
| | | | | Description: Update the MANIFEST for the files I've just addeed/removed.
* [svn-r14402] Description:Quincey Koziol2008-01-131-0/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Add work-around to allow reading files that were produced with a buggy earlier version of the library, which could create objects with the wrong object header message count. There is now a configure flag "--enable-strict-format-checks" which triggers a failure on reading a file with this sort of corruption (when enabled) and allows the object to be read (when disabled). The default value for the "strict-format-checks" flag is yes when the "debug" flag is enabled and no when the "debug" flag is disabled. Note that if strict format checks are disabled (allowing objects with this particular kind of corruption to be read) and the file is opened with write access, the library will re-write the object header for the corrupt object with the correct # of object header messages. This closes bugzilla bug #1010. Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
* [svn-r14390] Maintenance for VMS system before the final release:Elena Pourmal2008-01-091-0/+4
| | | | | | | | | Updated utilities test scripts to make output more legible; fixed some typos. Added four new expected output files to avoid false negative reports for the h5dump tests (for ones that expect to have error report in them). Updated MANIFEST to reflect the changes. Platforms tested: VMS server (more testing is on the way)
* [svn-r14363] Description:Quincey Koziol2008-01-031-0/+2
| | | | | | | | Refactor file space allocation routines into separate source module. Tested on: FreeBSD/32 6.2 (duty) in debug mode Mac OS X/32 10.4.10 (amazon) in debug mode
* [svn-r14354] Bug fix for #956 where the element coordinates went wrong for ↵Raymond Lu2007-12-201-0/+1
| | | | | | | | dataspace selection. Added a test for it, too. This round of checkin isn't well tarnished yet. I'll come back to work on Jan. 8. I'll revise it then. Tested it on kagiso, smirom, linew.
* [svn-r14344] Maintenance on VMS system: updated testscript for h5diff and ↵Elena Pourmal2007-12-131-1/+0
| | | | | | removed obsolete command file Platforms tested: VMS server
* [svn-r14343] Maintenance for VMS: added more tests to the command file for ↵Elena Pourmal2007-12-131-1/+0
| | | | | | | | h5dump testing modified the file to save output into h5dump_output.txt file removed obsolete test script file check.com update MANIFEST to refelect the change
* [svn-r14340] Maintenance for VMS system:Elena Pourmal2007-12-131-4/+5
| | | | | | | | | | | | | | | | | Skip one of the tests in flush2.c since it looks like VMS system flsuhes the file anyway (like on Winodws with DLLs) Renamed files family*.h5 that are used in backward compatibility testing to have only one '.' in a file name, otherwise VMS system becomes confused and test fails. Cleaned up the only test (Fortran multi-file test) that is failing on VMS (C counterpart passesa). Added new script to facilitate the build process on VMS Updated MANIFEST PLatforms tested: VMS server, kagiso and linew (minor changes)
* [svn-r14337] Maintenance: Added new install.com file to the list of files.Elena Pourmal2007-12-111-0/+1
| | | | Platforms tested: ran bin/chkmanifest script on kagiso