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Autotool Upgrade / Libtool Bug Fix
Description:
Updated autotools referenced in bin/reconfigure as follows:
Autoconf 2.64 --> Autoconf 2.65
Automake 1.11 --> Automake 1.11.1
Libtool 2.2.6a --> Libtool 2.2.6b-mcg
The referenced libtool version is a custom version of 2.2.6b. It
has been tweaked to fix a bug in libtool that occurs
when using PGI 10.0 compilers. A check incorrectly categorizes
the C++ compiler as version 1.0 instead of 10.0, and the link
line is subsequently set up incorrectly and fails to compile.
A patch has been made available and will be included in the next
release of libtool, but in the meantime I've applied the patch to a custom
installation as indicated above. This bin/reconfigure now references
the custom installation, and the resulting configure script will correctly
categorize the PGI 10.0 C++ compiler.
Ran bin/reconfigure to regenerate configure and makefiles.
Tested:
jam and amani with PGI 10.0 compilers.
h5committest
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Updating autotools
Description:
Bring revisions 17345 and 17357 from trunk to 1.8, specifically:
- Automake upgraded to 1.11
- Autoconf upgraded to 2.64
- bin/reconfigure script edited to use new versions (on jam), and
run to generate new configure script and Makefile.in's.
- configure.in script edited to add "_cv_" to all AC_CACHE_VAL strings
(in order to comply with new autoconf standard).
- bin/install-sh script replaced with new version as provided
by automake.
Tested:
- All issues on trunk were resolved, so only tested on jam and linew. Any
other outliers should be caught by daily tests.
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- Updated bin/reconfigure to use latest version of automake (1.10.2).
Regenerated Makefile.in's by running bin/reconfigure.
- Added libtool version numbers to c++, fortran, hl, hl c++, and hl fortran
libraries.
Tested:
jam, liberty, smirom
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Description:
1) configure now sets LD_LIBRARY_PATH before checking for presence of
SZIP encoder, so user does not need to set this. The path is then
saved and sent to Makefiles, and used when "make check-install" is
invoked, so user doesn't need to set this manually.
2) Upgraded libtool to version 2.2.6a
3) Rearranged tools build order as h5dump depends on existence of h5diff
and h5import. Since h5dump is a sister directory as opposed to a parent
of either, it doesn't know about the build rules of these tools, so
setting any sort of explicit dependency confuses automake as it won't
know how to build the tools. Instead, setting CONFIG = ordered forces
an in-order traversal of each tools subdirectory. (without it will also
traverse in order by default, but this should prevent gmake's -j option
from jumping ahead as well). 'make check install' should now be able to
be invoked after 'configure' without causing a dependency failure.
4) Removed H5_HAVE_LARGE_HSIZET macro from vms/src/h5pubconf.h, as this macro
has now been out of the code for some time. (vms pubconf needs to be
updated manually, which is why it was still hanging around).
Tested: kagiso, smirom, liberty
Note: h5diff looks to be causing failures in h5copy and h5dump tools tests,
though these were present before any of my changes. My changes only
affect build order and configuration setup, and shouldn't prevent
fixes for these failures coming in after this checkin. Other than these,
tests pass fine.
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Description: Changing libtool from 2.2 to 2.2.2. The newer version was released
last week and I missed the announcement before upgrading to 2.2
yesterday afternoon.
The new version is installed in home1/packages/libtool/, and the
bin/reconfigure script was updated and executed.
Tested: h5committest (smirom, linew, kagiso)
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libtool 2.2
Description: Updated bin/reconfigure script to reflect the new versions of
libtool and automake in the /home1/packages/ directory.
Rearranged configure.in script. For some reason, when using
libtool 2.2, the libtool script doesn't generate until
later in the configuration process, so I had to move
a test that parsed through the libtool script to a point
after where it was actually being generated.
Ran libtoolize on the project, and ran bin/reconfigure to
regenerate configure and Makefile.in's throughout.
Tested: kagiso, smirom, linew, tg-login
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most recent versions of the autotools.
Updated autotool versions are: autoconf 2.61, automake 1.10.0, and libtool 1.5.22.
Tested on kagiso.
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The version of libtool used by HDF5 isn't directly affected by the reconfigure
script; instead, libtoolize --force must be used by hand. Libtool was the
source of the problem, so rolling its version back to 1.5.14 should solve the
issue (at least temporarily).
Reconfigure should still work on both heping and kagiso.
Tested on heping, kagiso, and tg-login3.
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Hopefully this will fix
issues on tg-login3.
bin/reconfigure should still work on both heping/mir and kagiso.
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Linux machines.
Updated to the latest versions of autotools.
Tested on kagiso, heping, and juniper. Let me know if you have any problems.
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Automake version upgrade
Description:
Upgraded automake version from 1.6.2 to 1.9.5.
Changed bin/reconfigure script to use automake 1.9.5.
Changed configure.in and Makefiles to use new FCFLAGS and FC variables
instead of FFLAGS and F9X.
Automake and configure should now do the lion's share of the work
supporting Fortran 9X; macros in acsite.m4 are now mostly unused (will
be cleaned later).
Altered how configure handles pmake; now root-level Makefile.in is
processed by bin/reconfigure to have a .MAKEFLAGS target, since
automake no longer allows us to define unused variables.
Configure now always checks for C++ compiler even if it is not
used, since automake thinks this is the Right Thing To Do and
will break otherwise.
Platforms tested:
Sol, copper, heping, mir, sleipnir, eirene, pommier, kelgia, modi4.
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Libtool upgrade
Description:
HDF5 was using libtool 1.4.2. Upgraded to libtool 1.5.14.
Platforms tested:
verbena, heping, pommier, copper, modi4, arabica
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Configure feature
Description:
Changed bin/reconfigure.sh script to use autotools in AFS.
Solution:
Previously, the only machine with the correct versions of autoconf and
automake was heping. Now both tools are installed in AFS, so
in theory any hdf machine can be used to run the reconfigure script.
Platforms tested:
heping, eirene, verbena.
On sleipnir and arabica the autotools were unable to find a version
of m4 that was new enough for them.
Misc. update:
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Bug fix
Description:
Found the permanant fix to automake/CVS dependency problem
Solution:
Added AM_MAINTAINER_MODE macro to configure.in.
Now automake will never try to regenerate Makefiles, Makefiles.in,
configure, H5config.h, etc. when they are out of date, nor will it
print any warnings.
Developers should be very very careful to use reconfigure script,
and can add --enable-maintainer-mode flag to configure on heping
to regenerate these files correctly.
Platforms tested:
heping sleipnir copper
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Configuration feature
Description:
HDF5 now uses automake to generate Makefiles
Solution:
Makefile.in files are now generated from Makefile.am files.
To reconfigure (after chaning a Makefile.am or configure.in):
/bin/sh bin/reconfigure.sh
Platforms tested:
Many
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Bug fix.
Description:
There was a bug fix for AIX machine when Poe is used to
launch programs, that is in parallel mode. The fix is hostname
dependent.
Solution:
Removed the hostname dependence and let the fix apply to all
AIX machines. But put in a safety net--if $HDF5_AIX_NOPATCH
is set to non-null, it will not use the fix but use the
original code. (Don't expect this being used.)
Platforms tested:
Tested in Copper both with and without $HDF5_AIX_NOPATCH set.
Did not run h5committest since this really applies to AIX
systems only.
Misc. update:
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bug fix
Description:
Parallel binary generated in copper could not run without first
setting LIBPATH to some values. This is because libtool putting
a very restrictive libray path into the generated library.
Solution:
There had been hack in before for the other IBM SP systems
identified by hostname. Add copper to the list.
Also, narrow down the hostname patter for Nersc Seaborg
machine a little bit.
Platforms tested:
Copper parallel only since that is the only place it failed.
Misc. update:
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Porting to AIX 5.x
Description:
These have been tested out in v1.4. Folding them in here.
aclocal.m4:
Snow's names were not included in the special hack.
Added its names in.
Removed the trailing * in pacific.llnl.gov too.
configure.in:
fortran/configure.in:
Added a case to group all AIX 5.* versions as aix5.x. This allows
them to share one common config/*aix5.x file.
configure:
fortran/configure:
Derived from configure.in (done in eirene).
config/powerpc-ibm-aix4.x:
Added a comment explaining why not to cache sizeof size_t and off_t
fortran/config/powerpc-ibm-aix4.x:
Turned of cache of sizeof size_t and off_t because they are depedent
on compiler options.
config/powerpc-ibm-aix5.x:
fortran/config/powerpc-ibm-aix5.x:
New config file for AIX 5.X
Platforms tests:
LLNL Blue, Frost, Snow, both serial and parallel.
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Autotools Update
Description:
I've updated autoconf, automake, and libtool to the latest/greatest
versions; 2.53, 1.6, and 1.4.2 resp.
Many changes come with the new versions:
- ltconfig is no longer used
- acconfig.h is no longer used (#define values are declared with
the macro)
- regeneration of all of the aclocal.m4, configure, and
H5config.h.in files.
- new config.{guess,sub} files
- new ltmain.sh file
Platforms tested:
AIX (blue), and Linux
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Upgrade of GNU tools.
Description:
Upgraded the aclocal.m4 to the newest version of libtool.m4.
Platforms:
Linux.
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like use a "cross-compiling ar" to create the library archive.
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----------------------
./INSTALL
Reorganized and added some additional examples.
./MANIFEST
./aclocal.m4 [NEW]
./configure.in
./configure [REGENERATED]
./src/H5config.h.in [REGENERATED]
./bin/ltconfig [NEW]
./bin/ltmain.sh [NEW]
Added tests to determine how to compile shared libraries and
how to link programs with them before the libraries are
installed. Also how to install and uninstall shared
libraries. The configure step also prints the names of the
config files it's trying to load for easier debugging.
./bin/config.guess
./bin/config.sub
Replaced with a newer version from GNU. The changes we made
to that file to report `irix6.x' and `FreeBSD' without version
numbers have been incorporated into configure.in instead. In
the future, do not change these two files (see the top of
configure.in instead). By the way, this update was required to
get shared libraries working.
./config/linux [REMOVED]
./config/linux-gnulibc1 [NEW]
./config/linux-gnu [NEW]
./config/alpha-dec [REMOVED]
./config/alpha-dec-osf4.0 [REMOVED]
./config/dec-osf4.x [NEW]
./config/irix5.3 [REMOVED]
./config/irix5.x [NEW]
./config/irix64 [REMOVED]
./config/freebsd
Moved config files around to agree with output from the new
config.guess. The linux file was split into gnu (RedHat),
gnulibc1, and gnulibc2 versions. The alpha-dec file was
removed (I think it was unused) and the alpha-dec-osf4.0 was
changed to dec-osf4.x. The irix5.3 file renamed to irix5.x and
the irix64 file was renamed to irix6.x. The freebsd file was
changed to point to linux-gnulibc1. These changes were tested
on:
Linux 2.0
Linux 2.1
FreeBSD 3.2
Irix 5.3
Irix64 6.2
Irix64 6.4
HP/UX 10.20
OSF1 4.0
./config/alphaev56-dec-osf4.x
./config/irix64
Added warnings similar to linux/freebsd about using compilers
with known bugs.
./config/commence.in
./config/conclude.in
./src/Makefile.in
./test/Makefile.in
./testpar/Makefile.in
./tools/Makefile.in
Added definitions for shared libraries. This has been tested
on the following systems:
Linux 2.0
Linux 2.1
FreeBSD 3.2
Irix 5.3
Irix64 6.2
Irix64 6.4
HP/UX 10.20 static only
OSF1 4.0
If you want to disable use of shared libraries (you probably
do for development purposes since it takes a lot longer to
compile and because you have to run dynamically linked
programs in a special way if the library hasn't been
installed) then add `--disable-shared' to the configure
command line. This is all documented in the INSTALL file.
./bin/release
Temprarily commented out the MANIFEST checking when running
under svf since svf is about to be replaced by a newer
version. This change only affects error checking during the
release process.
./Makefile.dist
./Makefile.in
Added `make check' which does the same thing as `make _test'
since the former is endorsed by the GNU coding style and
people are used to it. The old `make _test' still works too
(and so does `make test' if you use GNU make).
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