| Commit message (Collapse) | Author | Age | Files | Lines |
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using latest versions.
No other files touched.
Tested: h5committest
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The temporary directory used by zip is the same as the rest but it has to be different.
Changed tar2zip to use a different (ztmpdir) name.
Tested: by hand running "bin/release ... gzip zip md5".
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Tested: by hand. "bin/release ... compress" to see it failed and to see it succeeded when compress is not used.
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Need to unify Windows release process (zip file) and Unix release process (bin/release-> tarfile)
Solution:
Added a new option (zip) to generate Windows zip file from the release tarball.
Tested: by hand running "bin/release ... gzip zip" to verify zip file looks right.
Allen and Dana then confirmed the zip file can be used to build and test HDF5
library without error.
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Remove WIN32 AND NOT CYGWIN if blocks - should be just WIN32
Tested: local linux CMake
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instead of INCLUDES. Update automake to 1.14.1
h5committest
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Remove all traces of MPI-POSIX VFD and GPFS detection/code.
Remove remaining traces of stream VFD.
Remove testpar/t_posix_compliant test (it's not actually verifying anything).
Clean up H5D__mpio_opt_possible() further.
Moved environment variable that disables MPI collective operations into
MPI-IO VFD (instead of it being in src/H5S.c).
A few other small code cleanups.
Tested on:
Mac OSX/64 10.9.2 (amazon) w/parallel & serial
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KitWare recommendations: Change CMake commands to lower case.
Remove INCLUDE_DIRECTORIES in src for target level includes.
Change ADD_DEFINITIONS package debug defines into CMake option.
Remove -DNDEBUG
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Tested: jam (only verify help message is correct and --script is invoked
correctly.)
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Changed to use the quick steps described in INSTALL_CMake.txt.
Previous version is available by --old.
Added a help page to explain how to use.
Added a fix to figure out the current HDF5 version and use that to find the
correct file for install. (Still need to figure out the platform name.)
Tested: Jam and Koala
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and never regenerated. The code for scaleoffset continued to change and the number of params for scaleoffset changed from 7 to 20 on the checkin of 23 Mar 05, rev 10384.
The h5dump tests only looked at headers and never the data. Data reads would fail with invalid number of params (7 expected 20).
Regenerated file and replacement ddls updated.
New h5dump test will be added to read the data.
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Tested: cygwin
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Updated CDash site name in cmake script.
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Clean up warnings, switch library code to use Standard C/POSIX wrapper
macros, remove internal calls to API routines, update checkapi and checkposix
scripts.
Tested on:
Mac OSX/64 10.8.3 (amazon) w/C++ & FORTRAN
Big-Endian Linux/64 (ostrich)
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Tested: jam
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Bring changes from Coverity branch to the trunk:
r20612:
Changed string functions to versions with string length to fix coverity issues
922, 942 and 943.
r20614:
Use HDsnprintf. --gh
r20675:
Fix for coverity #1714 due to the fix for #810.
Use HDfree() instead of H5MM_xfree().
r20678:
Repaired coverity issue #598 -- failure to check return value from a
call to fstat(), or to tidy up in the event of failure.
r20679:
Use HDstrncpy. --gh
r20681:
Use HDstrncat and HDstrncpy. --gh
Tested on:
Mac OSX/64 10.8.2 (amazon) w/Debug, etc.
(too minor to require h5committest)
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Change configure to test the result of the CHECK HEADERS call before checking for the library.
Tested: local linux, h5committest
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Description:
Adds 2 new API functions, H5Dscatter and H5Dgather. H5Dscatter retrieves data
from a specified callback function and scatters it into a selection, defined by
a supplied dataspace, within a supplied memory buffer. H5Dgather gathers data
from a selection within a supplied memory buffer and passes it in a contiguous
form to a supplied callback function. Added tests for these functions
Tested: jam, ostrich, koala (h5committest); ummon
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Set it NOT to submit result to the CDASH.
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all THG unix
platforms except Linew (SunOS).
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send debug output
to the standout. This keeps command output terse and easier to tell if it
passes or not.
Added time stamps printing.
Added exit code and command executation summary.
All these will make it easier for user to tell if the command succeeds or not.
Tested: {jam,koala,ostrich} all passed. {Linew,fred,duck,owl} failed.
The failure is the cmake process, not cmakehdf5 itself.
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This is an initial implementation and is known to work in
Jam only. More porting is in progress.
Tested: Jam
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Visual Studio that were removed.
Tested on jam.
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Add encode/decode API routines for property lists: H5Pencode/H5Pdecode.
Tested on:
FreeBSD/32 8.2 (loyalty) w/gcc4.6, w/C++ & FORTRAN, in debug mode
FreeBSD/64 8.2 (freedom) w/gcc4.6, w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x,
w/C++ & FORTRAN, w/threadsafe, in debug mode
Linux/64-amd64 2.6 (koala) w/Intel compilers, w/default API=1.6.x,
w/C++ & FORTRAN, in production mode
Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
w/szip filter, w/threadsafe, in production mode
Linux/PPC 2.6 (ostrich) w/C++ & FORTRAN, w/threadsafe, in debug mode
Linux/64-ia64 2.6 (ember) w/Intel compilers, w/parallel, C++ & FORTRAN,
in production mode
Mac OS X/32 10.7.3 (amazon) in debug mode
Mac OS X/32 10.7.3 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
Mac OS X/32 10.7.3 (amazon) w/parallel, in debug mode
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HDFFV-8143 Provide a routine(s) for telling the user why the library broke collective data access
Description:
Added H5Pget_mpio_no_collective_cause() function that retrive reasons why the collective I/O was broken during Read/Write IO access.
Reasons to break collective I/O:
- SET_INDEPENDENT
- DATATYPE_CONVERSION
- DATA_TRANSFORMS
- MPIPOSIX
- NOT_SIMPLE_OR_SCALAR_DATASPACES (NULL Space)
- POINT_SELECTIONS
- NOT_CONTIGUOUS_OR_CHUNKED_DATASET (Compact or External-Storage)
- FILTERS
Tested:
jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE)
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Tested: h5committest
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autotools TESTS var, rename configure.in to configure.ac, convert test scripts from hard *.sh to configure managed *sh.in files.
Tested: h5committest
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libtool 2.4.2
Tested THG machines.
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Add 'H5O_mcdt_search_cb_t' to bin/trace script and re-run the
bin/reconfigure script.
Tested on:
FreeBSD/32 8.2 (loyalty) w/gcc4.6, w/C++ & FORTRAN, in debug mode
FreeBSD/64 8.2 (freedom) w/gcc4.6, w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x,
w/C++ & FORTRAN, w/threadsafe, in debug mode
Linux/64-amd64 2.6 (koala) w/Intel compilers, w/default API=1.6.x,
w/C++ & FORTRAN, in production mode
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Merge "file image" changes from feature branch back to trunk.
Tested on:
Mac OSX/64 10.7.3 (amazon) w/debug
(h5committest upcoming)
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Update tracing information with new types introduced in "actual I/O mode"
query routines.
Tested on:
bin/reconfigure on jam
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parameter, which it can't process. This allows the correct H5TRACE8 trace function to be added to H5Epush2. Tested on jam (simple change).
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Tweak make_vers script so that it indents preprocessor commands inside
#ifdefs, is more forgiving and informative about the input file's prefix, and
is better parameterized with the global variables at the beginning of the
script. When major versions are branched from the trunk, the $max_idx value
should be the only value that needs to be changed in the version of the script
on the trunk.
Changes to H5version.h file are just indention.
Tested on:
Mac OS X/32 10.6.8 (amazon)
(too minor to require h5committest)
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`date` form.
Tested: Jam by running bin/release and eyeballed the new date format.
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Test scripts sometimes need to filter some system-specific messages from the
actual output so that it can match the correct expected output. These filtering
functions, ususally called "STDOUT_FILTER()" and "STDERR_FILTER()" were being
repeated in individual test scripts. This becomes a maintenance problem and
is error prone.
Solution:
Extract the two filter functions code to bin/output_filter.sh and then each
test script sources it in. This allows reuse of coding and is much easier to
maintain and to add new filtering.
Tested:
LLNL Zeus (linux64 cluster) and Dawndev (Blue-Gene cluster), both for serial
mode only.
--This line, and those below, will be ignored--
M tools/misc/testh5mkgrp.sh
M tools/h5dump/testh5dump.sh.in
M tools/h5diff/testh5diff.sh
M tools/h5copy/testh5copy.sh
M tools/h5ls/testh5ls.sh.in
M MANIFEST
A bin/output_filter.sh
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Teach the tracing script & routines about the 'unsigned long' and
'unsigned long long' types, so that the H5Pset_fapl_log() API routine gets
tracing information correct.
Tested on:
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
FreeBSD/32 8.2 (loyalty) w/gcc4.6, w/C++ & FORTRAN, in debug mode
FreeBSD/64 8.2 (freedom) w/gcc4.6, w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x,
w/C++ & FORTRAN, w/threadsafe, in debug mode
Linux/64-amd64 2.6 (koala) w/Intel compilers, w/default API=1.6.x,
w/C++ & FORTRAN, in production mode
Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
w/szip filter, w/threadsafe, in production mode
Linux/PPC 2.6 (heiwa) w/C++ & FORTRAN, w/threadsafe, in debug mode
Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
in production mode
Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in debug mode
Mac OS X/32 10.6.6 (amazon) in debug mode
Mac OS X/32 10.6.6 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
Mac OS X/32 10.6.6 (amazon) w/parallel, in debug mode
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The content of bin/config_para_ibm_sp.sh has been added to
release_docs/INSTALL_parallel long ago. Just got around to remove it.
Tested: no need since nothing refer to config_para_ibm_sp.sh except MANIFEST.
Ran bin/chkmanifest.
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(timestamp='2008-01-16', Rev. 1.361) from http://cvs.savannah.gnu.org/viewvc/config/config/.
Tested with h5committest on amani, heiwa, and jam and on linew.
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Tested with h5committest on amani, heiwa, and jam.
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